Os10g0578950
| Gene Name |
Os10g0578950 |
|---|---|
| Description |
AMP-dependent synthetase and ligase domain containing protein |
| Version |
NM_001189361.1 GI:297727852 GeneID:9272068 |
| Length |
3366 bp |
| Definition |
Oryza sativa Japonica Group Os10g0578950, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 10:23538495..23541860 |
| Sequence Coding Region |
23538495..23538626,23539129..23539231,23539356..23539423,23539551..23539708,23540361..23540550 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008403:23538495..23541860 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008403:23538495..23541860 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgcagcccgacgccgccgccaccgcccaccccagcttgagcttctactccgccgccacgggcctctacagcagcctccaccctcccctacccctcccctccgacccctctctctccctcgtcccccacctcttctcccatctccccctccaccaccattccctcctcgtcgatgcccccaccgccgccaccctctcctgcgccgacttccgccgcctcgtctcctccctcgccgccggcctccgccgccgcctccacatcgccaggggatccctcgtcctgctcctcctccccaactctctcaccttccccgttgccttcctcgccgtcctcgccaccggcgccgtcgccaccaccatgaacccctccagcgcccccgccgagatcgccgcgcgcctgcgggacaccgccccctccctcgtgctcgcctccacccacaacgccgctaagcttccgcctctcgccgccccgctcgtcctcgtgcccgacaccttccagcagcaacatgatgatgatcagttcgacttcttcttccacgcgctgctcgagaccgaccccgaaacgccggtggagatgggggtgggggtggggcaggacgacgccgccgccgtcctctactcgtcggggacgagcgggcggagcaagggcgtggtggtgacgcaccgcaacctgatcgcaatggtggagctgttcgtgcggttcgaggcgtcgcagtacacgcggcctgctcgtgacaatgtctacctggcggcattgcccatgttccacgtctacggcctctccctcttcgccgtgggcctcctctcgctcggctgcacggttgtcgtgatgaggaggttcaacgtcgacgacgccgtcaaggccatccgcaagtacaaggtgacgcacctgccgctcgtgccgcccatcatgtcggcactgctcagggccaacccgcccttggaattggattccttgctgcaggtctccagcggcgctgctcccctcaaccacaccctcattcaccacttccttcacgccttcccccacgttgatttcattcaggggtatggcatgactgaatctactgccgtaggaactcgcggcttcaatacatgcaagcacaagaagtatgcctcagtaggtcttttagcccccaacatgcatgctaaaattgttcatctggaaagtggttcttgtctgcctccaggctcttatggggagttatggctccatggcccggctataatgaaagaattttgcttcgtcacaggttacttgaatgatgatgatgatgctttcactagaaaggatggctggttgaggactggtgatattgcttactttgattcagatgggtatttgttcatagtgggtcgcttgaaagacacaatcaagtacaaaggatttcagatagctccagctgacttggaagctgttctgatccggcaccctgaaattattgatgttgctgtgacatctgatgaagatgaagaagctggagagatacctgtagcttttgtggtgagaaaatctggaagcactctttcttgtacgcatgtcatggagtatgtggccaagcaggtggcgtcgtataagagagtgaggaaggtaatattcgtggaggcgatacctaagtcagctgctggcaaggttctgaggaggcttctcaaggactctcttgttgatgcttccagtggcagatccaggctatga</cdnaseq> |
| Protein Sequence |
<aaseq>MQPDAAATAHPSLSFYSAATGLYSSLHPPLPLPSDPSLSLVPHL FSHLPLHHHSLLVDAPTAATLSCADFRRLVSSLAAGLRRRLHIARGSLVLLLLPNSLT FPVAFLAVLATGAVATTMNPSSAPAEIAARLRDTAPSLVLASTHNAAKLPPLAAPLVL VPDTFQQQHDDDQFDFFFHALLETDPETPVEMGVGVGQDDAAAVLYSSGTSGRSKGVV VTHRNLIAMVELFVRFEASQYTRPARDNVYLAALPMFHVYGLSLFAVGLLSLGCTVVV MRRFNVDDAVKAIRKYKVTHLPLVPPIMSALLRANPPLELDSLLQVSSGAAPLNHTLI HHFLHAFPHVDFIQGYGMTESTAVGTRGFNTCKHKKYASVGLLAPNMHAKIVHLESGS CLPPGSYGELWLHGPAIMKEFCFVTGYLNDDDDAFTRKDGWLRTGDIAYFDSDGYLFI VGRLKDTIKYKGFQIAPADLEAVLIRHPEIIDVAVTSDEDEEAGEIPVAFVVRKSGST LSCTHVMEYVAKQVASYKRVRKVIFVEAIPKSAAGKVLRRLLKDSLVDASSGRSRL</aaseq> |
| Gene Sequence |
<dnaseqindica>3235..3366#2630..2732#2438..2505#2153..2310#1311..1500#1..1044#atgcagcccgacgccgccgccaccgcccaccccagcttgagcttctactccgccgccacgggcctctacagcagcctccaccctcccctacccctcccctccgacccctctctctccctcgtcccccacctcttctcccatctccccctccaccaccattccctcctcgtcgatgcccccaccgccgccaccctctcctgcgccgacttccgccgcctcgtctcctccctcgccgccggcctccgccgccgcctccacatcgccaggggatccctcgtcctgctcctcctccccaactctctcaccttccccgttgccttcctcgccgtcctcgccaccggcgccgtcgccaccaccatgaacccctccagcgcccccgccgagatcgccgcgcgcctgcgggacaccgccccctccctcgtgctcgcctccacccacaacgccgctaagcttccgcctctcgccgccccgctcgtcctcgtgcccgacaccttccagcagcaacatgatgatgatcagttcgacttcttcttccacgcgctgctcgagaccgaccccgaaacgccggtggagatgggggtgggggtggggcaggacgacgccgccgccgtcctctactcgtcggggacgagcgggcggagcaagggcgtggtggtgacgcaccgcaacctgatcgcaatggtggagctgttcgtgcggttcgaggcgtcgcagtacacgcggcctgctcgtgacaatgtctacctggcggcattgcccatgttccacgtctacggcctctccctcttcgccgtgggcctcctctcgctcggctgcacggttgtcgtgatgaggaggttcaacgtcgacgacgccgtcaaggccatccgcaagtacaaggtgacgcacctgccgctcgtgccgcccatcatgtcggcactgctcagggccaacccgcccttggaattggattccttgctgcaggtctccagcggcgctgctcccctcaaccacaccctcattcaccacttccttcacgccttcccccacgttgatttcattcaggtccctccactccttcccctctctctctctctatatatatatatatatatatatatatatatatatatatatatatatatatatgcattattaattgcttctgtcccatgtttctcagttagcgtatcaattaaaaatgtggctgctaatgaatattttgtctttatctactgcatgtactacattttactcagctgttagggaatagtatatatgtggaatgggctctgaaatctccaatatatcttcatgcaatgtttgcacaggggtatggcatgactgaatctactgccgtaggaactcgcggcttcaatacatgcaagcacaagaagtatgcctcagtaggtcttttagcccccaacatgcatgctaaaattgttcatctggaaagtggttcttgtctgcctccaggctcttatggggagttatggctccatggcccggctataatgaaaggtaccgtgtcaaaaaaaatttactttattcaaaattctactatttttgcagtctgatacaaaagatttgataattatttcaaaagttaattaacaagcctaattattcacatatgctggtatgatctggctgcttggaatcttatatgaaaactacgcttttctactgactctagtttcttctgtactctctgccatcttgtttagctcctttagataatgtggttattcttgttgactgaagataacatggtcattcttttttagataaaaacgtggggtggtcattttttttttccactgcagataacagaatcattctgattttaaccttgtgtacttgctctgccgaacactaatcgttgcagtgctaaacactaaactctttttaaatacggtactgcattaggactcccatgggttgccatgcttagccaaaaaagaaagattcccaatgcatgctgctctcgaggaatagatttagctgccttcactaagtattgttcctgagatcagttaggcaaggttcctgagatccatggggaatggggatttagtttagcttccatactttagtctgtaacatcatatcccgctttaggtttgaatcatggtatgctgtacttgttacctctttgtatttgggttgtcagaattttgcttcgtcacaggttacttgaatgatgatgatgatgctttcactagaaaggatggctggttgaggactggtgatattgcttactttgattcagatgggtatttgttcatagtgggtcgcttgaaagacacaatcaagtacaaaggatttcaggtatggcctcctgtagcaggccttggaagttggaatacaatatcgttgttcttgtttcaaggaatttcaggtatcatgcaaggaagtctttggttgtaacaaattggtgtatttttcttgccttcagatagctccagctgacttggaagctgttctgatccggcaccctgaaattattgatgttgctgtgacatcgtaagatttttatttctaaacagcgtgatattatagctgttttatctgttatcatgtccttcaacgtgtttctttgattctctcgttactttttttttttgacattgattctctcgttacttagtgatgaagatgaagaagctggagagatacctgtagcttttgtggtgagaaaatctggaagcactctttcttgtacgcatgtcatggagtatgtggccaagcaggtaagaacaagaaggtcctacacaacacaacactcaccatattttcttgcttgggaacattacaagataataataacagcaagtgcacagagtgcattcttgttagctagagtatcaaattccagtaaaaatggatcactacaagctttatgcccacctgtgcaaataaatatggcagatattagttagtctcaagtcgtgttggtcagtgtgctcctctgcatccagcccacctgttttgaaaacagagatgtggttgttgtcagttgagcccccgtgtgtaccgatgggaatgtgtaactgatatgagcctgtctgtcagttggtttggccgcagccatagaagacattgtccatccagaagctggttgttctttgaccctgcccatccaaattaacaatatgtctttttttttcctgaagtaataatccttgggctgatgctgtctagtagagtgcttaccaagtagtgtgatgttgtatactgttatggtgggtgcaggtggcgtcgtataagagagtgaggaaggtaatattcgtggaggcgatacctaagtcagctgctggcaaggttctgaggaggcttctcaaggactctcttgttgatgcttccagtggcagatccaggctatga</dnaseqindica> |
| External Link(s) |
