Os11g0109000

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Revision as of 08:57, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0109000| Description = Protein phosphatase 2C-like domain containing protein| Version = NM_001072082.1 GI:115483776 GeneID:4349568| Length ...")
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Gene Name

Os11g0109000

Description

Protein phosphatase 2C-like domain containing protein

Version

NM_001072082.1 GI:115483776 GeneID:4349568

Length

3107 bp

Definition

Oryza sativa Japonica Group Os11g0109000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:421278..424384

Sequence Coding Region

421459..421620,422356..422697,422934..423051,423132..423355,423711..424127

Expression

GEO Profiles:Os11g0109000

Genome Context

<gbrowseImage1> name=NC_008404:421278..424384 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:421278..424384 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggatatgctgcagcaaggggaaggaggagcttgaggaggagggatttccatggaagcacgacgccttcttccacgaccagctttggagcgctggcgtctccatgcacaccaagcaaggctggaagggcgccaaccaggacgccatgactacctgccaggactttgcggggcacaagggccagatattttgtggagtttttgatgggcatggccctctcggaagggaagttgctcgccatgtccgcgacgtccttccagtgaaactatcctcctctttggcactgaagactgaacaagatccatccagcaacacagataaggaaaccttggaaaagtcagattgcacctcattgagcgatacaagcaatgagaagcaattgttatccacctggaagaacatatttgtcaagacatttgaggatgttgatgaggatctgaggcaacattctggaattgactgcatttgtagtggcacaactgctgtcactgtcgttaggcagggtgatcacctgatcattgcaaatttgggcgattcacgtgcggttctttgcacccgagacagcaaggaccgcccaatttcagtccaactaaccactgacctgaaaccaaatcttccaagcgaagctgagagaatcctgaattccaaggggcgggttttcgccatggacgatgagccggacgtgcctaggatgtggctaccagaccaagacgcgccgggcctcgccatggcaagggcatttggagatttctgcttgaagagtcatggactaatctgtacaccagaagtctactacaggaagctatctgcaaaagatgacttcttggtacttgctactgacgggatatgggacgtgctgtcgaacaaggaggtgatcaagatcgtatcgtcggctactgaccattccaaggccgccaagcagctcgtcgagcgggcggtgcgcacgtggcggcgcaagttcccgacgtcgatggtcgacgactgcgccgtggtgtgcctcttcttgaagccttcaccgtcgtcgtcggagagcacccccggggacgcgaaacctcctcaggccgtgtcgttcacgggcagcttccgaaaggtcctgggcggcggcggcggcgaggcggaggaggggacgaatgtatggagagctctggagggggtggctcgggtgaactcggtggtgaggctgccgcggatgggcgccgtgctgagctggcggcggcggtcgacgtcgctggaggaagacgacgaggcgaggattgattga</cdnaseq>

Protein Sequence

<aaseq>MGICCSKGKEELEEEGFPWKHDAFFHDQLWSAGVSMHTKQGWKG ANQDAMTTCQDFAGHKGQIFCGVFDGHGPLGREVARHVRDVLPVKLSSSLALKTEQDP SSNTDKETLEKSDCTSLSDTSNEKQLLSTWKNIFVKTFEDVDEDLRQHSGIDCICSGT TAVTVVRQGDHLIIANLGDSRAVLCTRDSKDRPISVQLTTDLKPNLPSEAERILNSKG RVFAMDDEPDVPRMWLPDQDAPGLAMARAFGDFCLKSHGLICTPEVYYRKLSAKDDFL VLATDGIWDVLSNKEVIKIVSSATDHSKAAKQLVERAVRTWRRKFPTSMVDDCAVVCL FLKPSPSSSESTPGDAKPPQAVSFTGSFRKVLGGGGGEAEEGTNVWRALEGVARVNSV VRLPRMGAVLSWRRRSTSLEEDDEARID</aaseq>

Gene Sequence

<dnaseqindica>182..343#1079..1420#1657..1774#1855..2078#2434..2850#atcgatgcacatccgtcgccattaatggccgatggatggggtgcctgatgcccaacatcaccatcaatgataaaacaacaaaactacttcaaccacccctacgcattcaactccattctactctctctaccccctccttccttccttccttcctaggggagcatcagcagcagcagaagcaatggggatatgctgcagcaaggggaaggaggagcttgaggaggagggatttccatggaagcacgacgccttcttccacgaccagctttggagcgctggcgtctccatgcacaccaagcaaggctggaagggcgccaaccaggacgccatgactacctgccaggtaaccacatctctcttgcattggattgcttgctcatcacattgctgcctcattgcttccatgtttttcccagtcctcctttgcttgtatgtacagattcttctctcattttgatactagtatcatgtactagtactacacaagctgagtctctagccatggaggaatggggtaatgctagtctagaaaggggctttgtttgcctactacaacttcaattcaggacatgatttgactttgagcaccatacactagtagattcatccatgctctgctgaaactgattttttttgtagcctgagctgtacctgcatttctgtaatagcctgtatttacttcaaatcttcaactagacctgattgcttgctcttgcatgtttgttcagtgctgcttagcttcttgtctctgcaaattccctcatctttgtgatatatgtacacaagctaaagctagccatggagggaaaagggtagtgctagtaaggggctttgattagatactacaagctgaattcagaacatgatttgagcaccgggcactagattcatctctgcttttgctgaaactgataaatgtacctacatttctgtaatatttacttcaaccgtacctgatcctctctagcttgcacctccaatgatagtacatttcccttttccccttgatgtgcacattttacttaatatatataagataatctaggtcttgatgtgctacctgtgtcaagttcattaggactttgcggggcacaagggccagatattttgtggagtttttgatgggcatggccctctcggaagggaagttgctcgccatgtccgcgacgtccttccagtgaaactatcctcctctttggcactgaagactgaacaagatccatccagcaacacagataaggaaaccttggaaaagtcagattgcacctcattgagcgatacaagcaatgagaagcaattgttatccacctggaagaacatatttgtcaagacatttgaggatgttgatgaggatctgaggcaacattctggaattgactgcatttgtagtggcacaactgctgtcactgtcgttaggcaggtactagtgctacaactatgcaaacttgcaacatttttttgtattgccaatagtcttgcctatgcactagaaatacaccgtttctgcctaaaaaacaagcttctgaaaccatcagatgcaacaaagaaacttgccgaattttatgcgtatgttacagctatacttgtgcctaaatacagaactctcaaactcgtaatcattctgattaaattcccaaatactattcttatgcacagggtgatcacctgatcattgcaaatttgggcgattcacgtgcggttctttgcacccgagacagcaaggaccgcccaatttcagtccaactaaccactgacctgaaaccaaatcttccaagtaagcctctgaatttctcaaagtacagagatgtctaaattcagacattcacttgtcattcatatgggggcttctgacaggcgaagctgagagaatcctgaattccaaggggcgggttttcgccatggacgatgagccggacgtgcctaggatgtggctaccagaccaagacgcgccgggcctcgccatggcaagggcatttggagatttctgcttgaagagtcatggactaatctgtacaccagaagtctactacaggaagctatctgcaaaagatgacttcttggtacttgctactgacggggtaagcaaacagaaagacttttgcctgatgatggcagccaaattcagtttcatttactcaccatcttttcataatcaagagtaacacttttctcttggttgtttcactgctactccagttccagtactagatatgaaatgagcacaaaattaatagtgcaaagccatatggttgcagccagaaaagcgaaagttaactgaatcatgaatgcttttgcctcaatcaatcaatcaaattgtttttttaaagataatgcaaccaatcaaaatttcatccacagggaatttataaatcagaatagcggatagaggttgtttttcagataatgcaaccaatcaaattgttgtgggtgcagatatgggacgtgctgtcgaacaaggaggtgatcaagatcgtatcgtcggctactgaccattccaaggccgccaagcagctcgtcgagcgggcggtgcgcacgtggcggcgcaagttcccgacgtcgatggtcgacgactgcgccgtggtgtgcctcttcttgaagccttcaccgtcgtcgtcggagagcacccccggggacgcgaaacctcctcaggccgtgtcgttcacgggcagcttccgaaaggtcctgggcggcggcggcggcgaggcggaggaggggacgaatgtatggagagctctggagggggtggctcgggtgaactcggtggtgaggctgccgcggatgggcgccgtgctgagctggcggcggcggtcgacgtcgctggaggaagacgacgaggcgaggattgattgattgattgataacagtcgctttcgttgccggaaaacgtaatccagagggtttgattacatgctttaaatggcaaaaattagggagacgctttagaagttgattgacgtaaacgtatgtcgcattcaggttgttgagttgacggaatagggaccgatactgctgctgctatcctccctctcttgtagtagctgaaaatgattgcctagctgttggatgtggtggcctttgtttgatttatttattgtgattcttccttc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0109000, RefSeq:Os11g0109000