Os11g0116500

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Revision as of 08:58, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0116500| Description = Similar to Chloroplastic outer envelope membrane protein (OEP75) precursor (Outer membrane protein)| Version = NM_001...")
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Gene Name

Os11g0116500

Description

Similar to Chloroplastic outer envelope membrane protein (OEP75) precursor (Outer membrane protein)

Version

NM_001072121.2 GI:297611105 GeneID:4349609

Length

3496 bp

Definition

Oryza sativa Japonica Group Os11g0116500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:738299..741794

Sequence Coding Region

738307..738558,738725..738979,739308..739556,739651..739845,739955..740062
,740186..740407,740808..741105,741319..741722

Expression

GEO Profiles:Os11g0116500

Genome Context

<gbrowseImage1> name=NC_008404:738299..741794 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:738299..741794 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccaagctgcttcaccctcgactccgcctccgatgatggaagaagcactgcccagggccagggatggcccgccggagtcggtggcttcctgtccggcttcttctccgccggcgcggcgcgcgcggacggagggaagccgtcgccggactgggacgcgcacggcctcgcggctagcgcgctgccggtgccgctctccaggctggacggcaagaagaggtacaaggtctcggatctcaccttcctcaactgccgcacccgcgccgccgccgccgccgccgcggaggcccccctcttcgacgcgctgcgccccggcggcgtctacaccagggcgcagctgcgcgacgagctcgacgcgctcgccacctccggcatgttcgaccacgtcaccctccaaaccaagccgtgcgtactgccggagaagttgcagagggagctgcaagggatggtgaagaggcagaggaaggtgagctccgggctgctcaagaggatggcggggcgcatcgagaggtggtaccacgacgaggggttccattgcgcgcaggtggtcagctaccacggcaacctcgacgccggcgaggtggtgtgcgaggtggtggagggggacatcaccaaggtggagtaccagttcctggacaagctcggcaatgtcgtcgacggcaacaccagcatccctctcattgacagggagcttcctcaacagcttcgtcctgggcatatctacaacaatggggcggggaagcaggctctgaagaatatcgattcgcttggtttgttctccactatagaagtacagcctcgccctgatgagacaaatcaagggggagtaatagttgcaattaagctcaaggaacatgacccaaaatcagctcaggtgatcacagattggagcattgtgcctggctctcaaggaagaccaactctggcgtccattcaaccaggaggaactgtgtcatttgagcaccgcaacatctgtggtctaaaaaggtctctcattggttctgttacatccagcaacttgctcaaccctgaggatgatctttcgttcaagctggagtatgcccatccttatctggatggtatcgacaaccttagtaggaaccgcaccttcaaaattagctgtttcaactccaggaaattgagtcctatattcgttgctggtcccaatatgtatgaagctccacctatctgggttgatagaattggatttaaagccaatataacagagagcttcacaaagcagagcaaattcacgtatggcctcatagtggaagagattacaacacgcgatgagaataacaatatatgtacacatggttctcgacaattgcctagtggcgccttgagcatgattggacctcccacaaccttaagtgggactggcgtagaccgaatggcgtttctacaagctaatataactcgagacaatacagagttcgtcaatggtgcaacaatcggtgacagatgtatattccagatggaccaaggtctcggcattggaagcaagaacccgttcttcaaccgtcatcagcttacagtgacgaaattcataaatttgaacaagcaagagaaaggctctcgcaagccaccaccagctgttttggctcttcatggccgttatgctgggtgtgtaggagatttgccaagctatgatgcatttgcacttggaggacctcattcagtaaggggctacggtatgggtgaattgggtgcttccagaaatcttcttgaggttgccactgagctgagcgtgcctatcaccgtgaagaacagacacacgcaggtgtatgcatttgctgagcatggcactgatcttgggagctccaaggatgtggaagggaaccctactgagtttttcagacgtgttggccatggctcatcctatggcgtcggtgtcaagcttggtgcggtaagggcagagtatgctgttgatcacaatgctggcacaggggccttcttcttgagatttggtgagagattctag</cdnaseq>

Protein Sequence

<aaseq>MPSCFTLDSASDDGRSTAQGQGWPAGVGGFLSGFFSAGAARADG GKPSPDWDAHGLAASALPVPLSRLDGKKRYKVSDLTFLNCRTRAAAAAAAEAPLFDAL RPGGVYTRAQLRDELDALATSGMFDHVTLQTKPCVLPEKLQRELQGMVKRQRKVSSGL LKRMAGRIERWYHDEGFHCAQVVSYHGNLDAGEVVCEVVEGDITKVEYQFLDKLGNVV DGNTSIPLIDRELPQQLRPGHIYNNGAGKQALKNIDSLGLFSTIEVQPRPDETNQGGV IVAIKLKEHDPKSAQVITDWSIVPGSQGRPTLASIQPGGTVSFEHRNICGLKRSLIGS VTSSNLLNPEDDLSFKLEYAHPYLDGIDNLSRNRTFKISCFNSRKLSPIFVAGPNMYE APPIWVDRIGFKANITESFTKQSKFTYGLIVEEITTRDENNNICTHGSRQLPSGALSM IGPPTTLSGTGVDRMAFLQANITRDNTEFVNGATIGDRCIFQMDQGLGIGSKNPFFNR HQLTVTKFINLNKQEKGSRKPPPAVLALHGRYAGCVGDLPSYDAFALGGPHSVRGYGM GELGASRNLLEVATELSVPITVKNRHTQVYAFAEHGTDLGSSKDVEGNPTEFFRRVGH GSSYGVGVKLGAVRAEYAVDHNAGTGAFFLRFGERF</aaseq>

Gene Sequence

<dnaseqindica>3237..3488#2816..3070#2239..2487#1950..2144#1733..1840#1388..1609#690..987#73..476#agaagcatccgtcgtcgtcgtcgtcgtggtgctctcgcgccattggcgccaaccttaacaaccgcaatcgcaatgccaagctgcttcaccctcgactccgcctccgatgatggaagaagcactgcccagggccagggatggcccgccggagtcggtggcttcctgtccggcttcttctccgccggcgcggcgcgcgcggacggagggaagccgtcgccggactgggacgcgcacggcctcgcggctagcgcgctgccggtgccgctctccaggctggacggcaagaagaggtacaaggtctcggatctcaccttcctcaactgccgcacccgcgccgccgccgccgccgccgcggaggcccccctcttcgacgcgctgcgccccggcggcgtctacaccagggcgcagctgcgcgacgagctcgacgcgctcgccacctccggcatgttcgaccacgtcaccctccaaaccaagcccaagccggacggcacgctcggcctcaccgtctcctacgccgagaccgagtggcccgcggtcgaacacttcaagtgcatcaacgtgggcggccccatggcgcggccggacggcgatgagctcgagctcgacgacgacatgacggcgagggagaggatggaacacctccggaggcaggagcgcgagtaccagcagctcgtccgccgcgccaagccgtgcgtactgccggagaagttgcagagggagctgcaagggatggtgaagaggcagaggaaggtgagctccgggctgctcaagaggatggcggggcgcatcgagaggtggtaccacgacgaggggttccattgcgcgcaggtggtcagctaccacggcaacctcgacgccggcgaggtggtgtgcgaggtggtggagggggacatcaccaaggtggagtaccagttcctggacaagctcggcaatgtcgtcgacggcaacaccagcatccctctcattgacagggagcttcctcaacaggtttgcgtacaaataattttgctagtatctatcactgtcgagctcaatgtctaaattaatgttcagattttcaatagcagatggctatgattttgttgtttaattttgcgacgaatttcttagccgatttctccgataattatactggttgagccaacgtgactgttttgcaataaaatgtctcttgatccaagttttgttaatgttgctagtatcactgtcaagctccatgtctaacaagaaaaactaacatttttaatagcagatggctatgattttgttgtttgattttgcaacaaatttcttggctttgcgtatatttgattatgattctctgataattgtaccagttgtgccaatgtgactgttgtgcaataaaatggctgttgatatcttacagcttcgtcctgggcatatctacaacaatggggcggggaagcaggctctgaagaatatcgattcgcttggtttgttctccactatagaagtacagcctcgccctgatgagacaaatcaagggggagtaatagttgcaattaagctcaaggaacatgacccaaaatcagctcaggtgatcacagattggagcattgtgcctggctctcaaggaagaccaactctggtaatgtgcaaccttttgttcttccagatcgaatatgtacttaacatgctagacaccattgtgaatatatacattccctcatcactgcaagtcattttgtataacctcacaacttcctcttaggcgtccattcaaccaggaggaactgtgtcatttgagcaccgcaacatctgtggtctaaaaaggtctctcattggttctgttacatccagcaacttgctcaaccctgaggtgagttggtagttagttttttttttctttttcccatcagcttcgatgctgcttttggctgctgttatatcagtcatacatgatagtatggtattttggtgagtattaggatgatctttcgttcaagctggagtatgcccatccttatctggatggtatcgacaaccttagtaggaaccgcaccttcaaaattagctgtttcaactccaggaaattgagtcctatattcgttgctggtcccaatatgtatgaagctccacctatctgggttgatagaattggatttaaagccaatataacagaggtttgcacaattgatattaccttccactccttttaactatcatggacagttattaacaacatataggaaactgcattttggatcttttattcagagcttcacaaagcagagcaaattcacgtatggcctcatagtggaagagattacaacacgcgatgagaataacaatatatgtacacatggttctcgacaattgcctagtggcgccttgagcatgattggacctcccacaaccttaagtgggactggcgtagaccgaatggcgtttctacaagctaatataactcgagacaatacagagttcgtcaatggtgcaacaatcggtgacagatgtatattccaggtatgcttatttgtaccctggttctaggaacacaaactcaacctttactcattgccaggtagctctgtagcaaaaagttgtcacctgaaaagaccaatgagactgatcgatattttggaaaattttaggaaatgtttcggtacatttgttcaagagtttcaaaggaatagtgaacaagtaatttgtgcgttattgggaaaaaaaacatttttgcaaacatattgatgatatttgggctaataagttttgttcaaaagtagcatgtttttatacaaaattctccatgctaaagtaaactctctgaacaaagttttcttgtcggctacagatggaccaaggtctcggcattggaagcaagaacccgttcttcaaccgtcatcagcttacagtgacgaaattcataaatttgaacaagcaagagaaaggctctcgcaagccaccaccagctgttttggctcttcatggccgttatgctgggtgtgtaggagatttgccaagctatgatgcatttgcacttggaggacctcattcagtaaggggctacggtatgggtgaattgggtgcttccagaaatcttcttgaggtgagtattagctagtccatcagtgaattttgagtctcatgaattgctgaattcagaatttcagttgaacaattttcaccgtttatgatgttacatgcttagagactcagatttccaaaaaaaaaaaaatactgctttgttttctgaattgttgtgacctatgaaggttgccactgagctgagcgtgcctatcaccgtgaagaacagacacacgcaggtgtatgcatttgctgagcatggcactgatcttgggagctccaaggatgtggaagggaaccctactgagtttttcagacgtgttggccatggctcatcctatggcgtcggtgtcaagcttggtgcggtaagggcagagtatgctgttgatcacaatgctggcacaggggccttcttcttgagatttggtgagagattctagtctaggtg</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0116500, RefSeq:Os11g0116500