Os11g0116300

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Revision as of 08:58, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0116300| Description = Chalcone-flavanone isomerase family protein| Version = NM_001072119.1 GI:115483850 GeneID:4349607| Length = 3242 bp|...")
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Gene Name

Os11g0116300

Description

Chalcone-flavanone isomerase family protein

Version

NM_001072119.1 GI:115483850 GeneID:4349607

Length

3242 bp

Definition

Oryza sativa Japonica Group Os11g0116300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:728517..731758

Sequence Coding Region

728646..728807,728917..729143,729429..729587,729685..729774,731636

Expression

GEO Profiles:Os11g0116300

Genome Context

<gbrowseImage1> name=NC_008404:728517..731758 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:728517..731758 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcacagagatagccaccgtggaggtggagggcatcccatttcctcaggagataaccgtcagtaagccattgtcactgcttgctaatggcatcacagacattgagatccatttccttcagatcaaatacaacgccatcggggtgtatcttgaaaaggacaatgtgctagcgcatttggagagttggaagggcaagaaggccgaggagcttgtgcaggatgatggcttctttcaggccctagtttctgctccggtggagaaattgttgaggatagtggtgatcaaggagatcaaaggatcacaatacggcgtgcagctggagagttcagtgcgtgaccgtctcgtgtcagtagacaagtacgaggaggatgaagaagaggctctggagaaggtcaccgaattctttcagtccaagtatttcaagcccaactccgtcatcaccttccactttcctaccacccctggaattgcagagatatcatttgtgacagaaggcaagggcgaggcgaagctgacagtggagaacaagaatgtggccgagatgattcagaagtggtacctgggtggagaatctgcagtttctccgacgactgtgaagagcctggcagatcaattcgcagcactgctctctgcatga</cdnaseq>

Protein Sequence

<aaseq>MGTEIATVEVEGIPFPQEITVSKPLSLLANGITDIEIHFLQIKY NAIGVYLEKDNVLAHLESWKGKKAEELVQDDGFFQALVSAPVEKLLRIVVIKEIKGSQ YGVQLESSVRDRLVSVDKYEEDEEEALEKVTEFFQSKYFKPNSVITFHFPTTPGIAEI SFVTEGKGEAKLTVENKNVAEMIQKWYLGGESAVSPTTVKSLADQFAALLSA</aaseq>

Gene Sequence

<dnaseqindica>2952..3113#2616..2842#2172..2330#1985..2074#731753..731028#actcacgctctttcgatcttcagctcctctctatttctctcgtcaacaattagcgctctctattcatcgcaaggagcaaaagcagtttcagttccaacctccttctggttccattgctaagaagtaagttaatctctctttcttgcttccttctgatggatccttgctagtagtagtattactccgagcatgtttaatttggttgctacctgagagaagcatgcctggacttatgtcctgtttgaatccagggactaaatcacatagaatgtttgatattaattagaagtattaaacgtagactaatgacaaaacctattctataatcttagactaattcgcgagataaatctattgagcctaattaattcatgattagcctatgtgaagctaccgtaaaaatatgctaattatggattaattaggcttataaaatttgtatcgcaaattaactctcatttatgtaatttgttttattattaatttatatttaatacttctagttagtgtcaaatatagtccttgtcacatcggatgtttagacgctaatttcgagtattaaatatagactaattagaaaactaattgcataaatgagagctaattcacgagataaattttttaagcctaattaatctataattagcacatatttaatgctagcatcacatagactataatcatggattaattaggcctaaaaattcgtctcatgaattaggtcttatttatgcaattagttttgtaattagtctatgtttaatactctaaaatagcatctaaacatctaatgtgatagggactaaagttttaggctgtgtttagatccaggggtgaaaagttttaccgtgttacatcgaatatacggacatacatttgaagtattaaacgtagtctaataacaaaacaaattacagatttcgcctgtaaattgcgagacgaatttattaaacctaactaattcatcattagaaaatatttactgtaacaccatattattaaatcatggagtaattaggcttaaaagatttgtgtcgatcttgattggttgctacccaagactgttctccactggcctggcctgacgcatactccagccatagaggcgtgcaattagcgcggccgatttctgtcgcccgaggctccaggcgtaaacaaatgcgtgctttaccatcgaaatctcaactgtacgaagtcatcaccgcgtgccgccatcgcacgaggctgcccctgatctgacgccactgcgtgaagcccacacctacctcaatcgccaccgccggcaagcgaagccactgccgtggtcgtcgttgagcgaagtccccgcgttggtcgagtttgtacgaagcttcgcgtgatcccctttgccggatccagcttagagcgaagcttcaattcagctgatgctgctgattttgctgatcgttattgcgactttggggatatttttggaaagttaggtatgtagcatatggattttgtgagatttttcccgagacgccaagccgttttgtcgagatttttgttcttcccgtctaatacttgagttagcagtaatcatctactcgatcaggcagcagcagcaaaccaaacaagcaactcgtcaggtggaacccatgagtttgttggagtgcaaattcttcaggcgtggtgctcaggtcaccaaccaaacaggccttctgtctttcgtccgtcttgagggatatcaagaaaagacattctcatggttctaaaaaaaagggatatcaagaactcaaaaagactttctcatgaatgaatgtatctaattccatctgaaactctggtggtagcttcatacccacttcggactttgcactagcttgtacatttagagaaattctgaaagtagtatgtgaaggttgttgaaatatgcttatatacaaaacatgaccatacatgtactggtaattacaagatttcaatgcccaattagttgcattttgcatgattgttgtaagtgcagtgggcacagagatagccaccgtggaggtggagggcatcccatttcctcaggagataaccgtcagtaagccattgtcactgcttgctaatggtaattaattaatctactaacgaattaagctgttaactaatatcagattatcagtacaacacaagcctctaaacgcctttgaaataaccaattgcaggcatcacagacattgagatccatttccttcagatcaaatacaacgccatcggggtgtatcttgaaaaggacaatgtgctagcgcatttggagagttggaagggcaagaaggccgaggagcttgtgcaggatgatggcttctttcaggccctagtttctggtaactaaaatgacccccatcattcagattttgcacttcagaatctgtaaaagctgatttagaattgcctgttctacagtatgtcaatgccattctcccatttcaagtgacaaatcacaaatagtagtattttctctgtagagtttatagaacattgttatatcctataaaataaaacagagtaaggttcagcttcagctcgacagctcatgcattacagcaataacttttttttttcattatttcatttgaatcatgctgattgatgatgtttacgtgtggtagctccggtggagaaattgttgaggatagtggtgatcaaggagatcaaaggatcacaatacggcgtgcagctggagagttcagtgcgtgaccgtctcgtgtcagtagacaagtacgaggaggatgaagaagaggctctggagaaggtcaccgaattctttcagtccaagtatttcaagcccaactccgtcatcaccttccactttcctaccacccctggaattgcagaggtataatcttgtagagtactccttatattcagctgggtttggttaagatatcaagtgatcaaatctttgttcttgcaaacctaattgaatcatgcatatatgtgtgcagatatcatttgtgacagaaggcaagggcgaggcgaagctgacagtggagaacaagaatgtggccgagatgattcagaagtggtacctgggtggagaatctgcagtttctccgacgactgtgaagagcctggcagatcaattcgcagcactgctctctgcatgaggcatggagtaataaactactgtagtaatgttgcccgtttccctttcatttttaattcgatcatgctttgatttgtccagctgctctcatgtgcatgctacaattgataatggtattgatttccctact</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0116300, RefSeq:Os11g0116300