Os11g0120200

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Revision as of 08:58, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0120200| Description = Protein of unknown function DUF936, plant family protein| Version = NM_001072139.1 GI:115483890 GeneID:4349628| Leng...")
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Gene Name

Os11g0120200

Description

Protein of unknown function DUF936, plant family protein

Version

NM_001072139.1 GI:115483890 GeneID:4349628

Length

2869 bp

Definition

Oryza sativa Japonica Group Os11g0120200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:888339..891207

Sequence Coding Region

888466..889183,889269..889360,889448..889666,890045..891142

Expression

GEO Profiles:Os11g0120200

Genome Context

<gbrowseImage1> name=NC_008404:888339..891207 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:888339..891207 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccacggtcacgccgggggtgctgctcaagctgctgcaggcgatgcacaccgacgaccgcgtcgccggcgaccaccgctcccccgtcctccaggtcacggccgtagtccccgccctcaccgcctccaccgccgactccctctggccctccaacggcttcctcctccagctctccgacggcctccactccacctacgtccagccatcctccgccgacgccgacgccctcgtctccgcgcgcccgcaactcgtcggccacctcgtccacctcgaccgcctccgcttcgcccgcccggtgccccgcgccgtcgggatccgccccgtcccgtcctcccgcagcgtctccttcgtaggaaacccggagccgctcgtcgcccgccccgccgcgtgctcccgcggctacgtcatccagcccgggtcccactccgactccgcgccgccgctcatgccatccagttccggcaatgcggtgcagtccgatgcaacggatgccgtcaagaggattgttctcgcgcccaagagcgtctccgaggccgcgccgccgcccgccgtttcagccgccaagaggcggttctcgtctccggcgccgtccaagcagcgagatccgtcgccttcggtcaagggcggcgcgtcacggccttcgtcgccctcggtgaagggcgcttcccgagcgtcctcacctgcggtcaggggcacgcccagggcgacgtcaccagcgccttccaaatgcgtggtgcccagccttgtttcggccaaggaggagaatcgccgcacggcgagggagccagcgattatcgtgccatcgaggtacaggcagccgtcaccggtaggagggaggagaggggcggcgtcgcccgcacccggtgggaggcgcgcgtcactgtctcctagctcccggaggctgtccggggaaggtagcagcaagaagaaggtcggggtgttggtggctggtatctccaagatgacggatttgacgaatgggtcggctgttaagccggggaggaagagctgggacaatacctcaatcgcagcagcggctggctctgtgatgaaatcgaaggtcaaggtggataagagtactattctgaggacacaggaagcaatggcaagacgactgagtgatgttacaacagaactatccagtaacgatgatgattcatctgtagatgagaagccaaagccacggaagaagatagagtcacctgcagtaaagacgaaagcaatggctccaaaaattatgcttcatgatcctaaatggaccgatggaagcattccattggatggagtttctgatgtgctttcaaagatgggaaaggaagccactgaacgaagagacgcagcagcaattgctgcagctgatgctctccaggaggcattaatcactgaatccgtaatcaggaacctaagtaaattttctgaacttacttcagcatcgaagacctccaatccccttccaacagttgatatcttccttgctgtctatgaggatactctcaaatggaagaaaattgctgagtctatatccaccaatagaactgaaactgcatcatgggagaattcagctactcattgggttgaagcagcattggcaactgatcttgaagtcctaaagttgatgaataaggcacctgaatcgctctctcggaaaaggggtgctgataagccaaaggctccctcggtggtagaagctccaagaacaaccatatccaagaggcaatcacatgggacttctgcaaaggtccagtcaaaggtcttaccgacctctacagcgagctgcgcatggaacaaaactcagggcgtgaatgagacggctgagcttgccacgaccttgtgccgtgagatgcatacgtggttcctgaaatttgtggacgaggcaatggatttgggtttccacctttttgaagatcagaatgttgcaagtaggggaaagcagagcagccacataacaatggtactgtcccagttcaagaagatcagtgactggttggatggagtaggcaagattgcagaagaggctacaactaaggataaggttgagcagttgaagtgcaagatttacgggttcgtcatcaatcacatgggatctgcatttgatagctcggtctcgatttcatcaaggaattga</cdnaseq>

Protein Sequence

<aaseq>MATVTPGVLLKLLQAMHTDDRVAGDHRSPVLQVTAVVPALTAST ADSLWPSNGFLLQLSDGLHSTYVQPSSADADALVSARPQLVGHLVHLDRLRFARPVPR AVGIRPVPSSRSVSFVGNPEPLVARPAACSRGYVIQPGSHSDSAPPLMPSSSGNAVQS DATDAVKRIVLAPKSVSEAAPPPAVSAAKRRFSSPAPSKQRDPSPSVKGGASRPSSPS VKGASRASSPAVRGTPRATSPAPSKCVVPSLVSAKEENRRTAREPAIIVPSRYRQPSP VGGRRGAASPAPGGRRASLSPSSRRLSGEGSSKKKVGVLVAGISKMTDLTNGSAVKPG RKSWDNTSIAAAAGSVMKSKVKVDKSTILRTQEAMARRLSDVTTELSSNDDDSSVDEK PKPRKKIESPAVKTKAMAPKIMLHDPKWTDGSIPLDGVSDVLSKMGKEATERRDAAAI AAADALQEALITESVIRNLSKFSELTSASKTSNPLPTVDIFLAVYEDTLKWKKIAESI STNRTETASWENSATHWVEAALATDLEVLKLMNKAPESLSRKRGADKPKAPSVVEAPR TTISKRQSHGTSAKVQSKVLPTSTASCAWNKTQGVNETAELATTLCREMHTWFLKFVD EAMDLGFHLFEDQNVASRGKQSSHITMVLSQFKKISDWLDGVGKIAEEATTKDKVEQL KCKIYGFVINHMGSAFDSSVSISSRN</aaseq>

Gene Sequence

<dnaseqindica>2025..2742#1848..1939#1542..1760#66..1163#actcttcccccaaatccctcctccccatcgcggcgctgccgccgctcctcctccggcagccagccatggccacggtcacgccgggggtgctgctcaagctgctgcaggcgatgcacaccgacgaccgcgtcgccggcgaccaccgctcccccgtcctccaggtcacggccgtagtccccgccctcaccgcctccaccgccgactccctctggccctccaacggcttcctcctccagctctccgacggcctccactccacctacgtccagccatcctccgccgacgccgacgccctcgtctccgcgcgcccgcaactcgtcggccacctcgtccacctcgaccgcctccgcttcgcccgcccggtgccccgcgccgtcgggatccgccccgtcccgtcctcccgcagcgtctccttcgtaggaaacccggagccgctcgtcgcccgccccgccgcgtgctcccgcggctacgtcatccagcccgggtcccactccgactccgcgccgccgctcatgccatccagttccggcaatgcggtgcagtccgatgcaacggatgccgtcaagaggattgttctcgcgcccaagagcgtctccgaggccgcgccgccgcccgccgtttcagccgccaagaggcggttctcgtctccggcgccgtccaagcagcgagatccgtcgccttcggtcaagggcggcgcgtcacggccttcgtcgccctcggtgaagggcgcttcccgagcgtcctcacctgcggtcaggggcacgcccagggcgacgtcaccagcgccttccaaatgcgtggtgcccagccttgtttcggccaaggaggagaatcgccgcacggcgagggagccagcgattatcgtgccatcgaggtacaggcagccgtcaccggtaggagggaggagaggggcggcgtcgcccgcacccggtgggaggcgcgcgtcactgtctcctagctcccggaggctgtccggggaaggtagcagcaagaagaaggtcggggtgttggtggctggtatctccaagatgacggatttgacgaatgggtcggctgttaagccggggaggaagagctgggacaatacctcaatcgcagcagcggctggctctgtgatgaaatcgaaggtcaaggtggataagagtactattctgaggacacaggtcagtatcatttttacatttgtgttgcaattgcaatcttggaaatgtgcttgctatgctactattgctatatacttgtacatgcactgcacattcatcttgttgtagtgaacagacaaatagtacaactctactttgaacaggctaatcgtagtgaaaacagtggttacttcaaatgcttgattcagtacatatatgagaaatggcatgattttcttgcagttacttaaaatatttataagtttattgaggaaagagagaatttaaaatactggtatttattttctttccatatgcaatggcagctagttgttatctttgaattggagtcatgtaggtgcccttcgcgaccatcatcacctttttgtgtaactgcaggaagcaatggcaagacgactgagtgatgttacaacagaactatccagtaacgatgatgattcatctgtagatgagaagccaaagccacggaagaagatagagtcacctgcagtaaagacgaaagcaatggctccaaaaattatgcttcatgatcctaaatggaccgatggaagcattccattggatggagtttctgatgtgctttcaaagatgggaaaggtaagcactcccaattcatctttgttagcaatgatcaagtcgcagttcattgatccttgaaacaccacctcttctctgaatttgcaggaagccactgaacgaagagacgcagcagcaattgctgcagctgatgctctccaggaggcattaatcactgaatccgtaatcaggaacctaaggtaattaaaagccgacttgtgtccccggaatttcattcagcacaaaagtggtttttcctaacactcagcttgctattgtccacagtaaattttctgaacttacttcagcatcgaagacctccaatccccttccaacagttgatatcttccttgctgtctatgaggatactctcaaatggaagaaaattgctgagtctatatccaccaatagaactgaaactgcatcatgggagaattcagctactcattgggttgaagcagcattggcaactgatcttgaagtcctaaagttgatgaataaggcacctgaatcgctctctcggaaaaggggtgctgataagccaaaggctccctcggtggtagaagctccaagaacaaccatatccaagaggcaatcacatgggacttctgcaaaggtccagtcaaaggtcttaccgacctctacagcgagctgcgcatggaacaaaactcagggcgtgaatgagacggctgagcttgccacgaccttgtgccgtgagatgcatacgtggttcctgaaatttgtggacgaggcaatggatttgggtttccacctttttgaagatcagaatgttgcaagtaggggaaagcagagcagccacataacaatggtactgtcccagttcaagaagatcagtgactggttggatggagtaggcaagattgcagaagaggctacaactaaggataaggttgagcagttgaagtgcaagatttacgggttcgtcatcaatcacatgggatctgcatttgatagctcggtctcgatttcatcaaggaattgaggaatgcttaaagtaagcctttaagtttcttctcttttatttttgttcattggggatgggatcaaagctacataattctatgacgagaggtctgctacagtttgtagaagctactccttcagttatt</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0120200, RefSeq:Os11g0120200