Os11g0123500

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Revision as of 08:58, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0123500| Description = Snf7 family protein| Version = NM_001072148.1 GI:115483908 GeneID:4349637| Length = 4309 bp| Definition = Oryza sat...")
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Gene Name

Os11g0123500

Description

Snf7 family protein

Version

NM_001072148.1 GI:115483908 GeneID:4349637

Length

4309 bp

Definition

Oryza sativa Japonica Group Os11g0123500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:1059975..1064283

Sequence Coding Region

1060105..1060275,1060437..1060551,1060827..1060918,1061025..1061110,1061547..1061646
,1062666..1062752

Expression

GEO Profiles:Os11g0123500

Genome Context

<gbrowseImage1> name=NC_008404:1059975..1064283 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:1059975..1064283 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctgaagaaactgctatcaaagcctaagagcaagaagaaggaggctgcctcctctgcgctccccactttggatcgtctccatgagactctagaaatgctggagaagaaagagtgctttcttcagaagaaggcttctgcagaagttgaaaaggctaaggattatacaaaagctaagaacaaaagcgctgcaattcagtgtctaaagaaaaagaagctgtatgaaacacaaattgagcagctagcaaatttccaattgcgagttcatgatcagataataatgcttgagagcgcaaaggcaaccacagataccgttgatgctttgcgctctggatcatctgctgtcaaagctattcatcagtcagtgagtattgatgacattgaaaatgccattgaagaggcaaatgaacacacagaaaatatgaggcagatacaggaggcacttgcaacaccaattggcgcttctgctgatttcgacgaggatgaactagaagcagagctggaagatctggaggaggaagagctcgaccatgagctgcctgaaccacctcagagtacacgcatggaaccatcagcgagagttacaacttcatctcaaccagccaatgatttggctgaactgaccaaacttcaagcagagatggcgctttaa</cdnaseq>

Protein Sequence

<aaseq>MLKKLLSKPKSKKKEAASSALPTLDRLHETLEMLEKKECFLQKK ASAEVEKAKDYTKAKNKSAAIQCLKKKKLYETQIEQLANFQLRVHDQIIMLESAKATT DTVDALRSGSSAVKAIHQSVSIDDIENAIEEANEHTENMRQIQEALATPIGASADFDE DELEAELEDLEEEELDHELPEPPQSTRMEPSARVTTSSQPANDLAELTKLQAEMAL</aaseq>

Gene Sequence

<dnaseqindica>4009..4179#3733..3847#3366..3457#3174..3259#2638..2737#1532..1618#ggtgagcttccgggggcggtgcagggtgcggccgcacggctcggcgtcgtcaatgcgggcgatggtagcctggtaggtaaggttggtatgctccgctcaggcctgggggtaaggagtttttcttccccttcttttcccaatattcttaaggtcggggagagatgctgctgctgcatttgctgttcgtttgttcgcataccaagtgagcctacgcgtttcttttcaggtttgcactcgtctggggggatttgagagtccttgagcaagtggatccgtagctttcgttggtatgtaatgtggagaattgaattttctaaagcatacatgtacgtttctgttctttcgtagctgtaccgtacacggtgatggttctgaccagatttcgctaagaccttttcttctatgctattagcctattattagccatgtaggagttggaattttactccatttggcatcaattcaatcctttcaagaaaaataactcatggagcaagactacttctttgtttgccttttagttgtatgtgaagtttatcaagctgcagttcacccccccactttggtaaaaagacaccaacagcatcttgtatcatcccatcatcatttgttaagacgaataatggcagatcaactacttgtcctaaaaagagaagcgcattatttacaaaattgtcttaagagcttaatttgtttcaagtaagaaaaatgatgggatgagtattaggttcagacttcagtctcagagaggtgcaggctgttgtcacaacaagctttgtagagtacattcaactaaccacatgaacgtggagcccagggatttgccaagatatgcaaggcacacctaatccaacataacctactacagttctctgtcatcagaaagttgaaagtgtttcttgtgttgtatttatacccctcttttggcagtagaatagtcacagtcaaagtaatttgcttgaaatttattcaacaaaatatatacaaatttcacatagtgaatttgatattttatcttgactgatacctcctccctttcatctgcggtagtctttagtgtacaacacatgcttttaagaccttagtgtttttaggaagcaagttgataattacaattgtttatacttgtaacaacaaggcttgattttagcattgaaagtatctttccagaaataaaaacctattgaacaaaaagtggtcacacataggcaaactgtcaaacatggagcaagtatctcaagacagtgatctcattgaaactgtccttatttctttttcgtaagcgcacaggtccacttttatcttccttcacatgcttaaaggcttaaagctatccctgctgtttcttcctacaattctcaacgaatctgactctaacctccatttcctttactttcccctcgactcctcttggtctttcaccctactggaacgaccatacagatttagccattaatcatccacctcttccttcctaacataggccatcatcatctgacagtaagaatccagaggtgggtgtgacaagaagatgctgaagaaactgctatcaaagcctaagagcaagaagaaggaggctgcctcctctgcgctccccactttggatcgtctccatgaggttgttcatcccttttcttttattccttttctattctcgattactttgtattctgtgttgtctccgcagaaatttatcagctgtgggactattatcaagctatctaatgttagcatgacggggttgggagtttatggctgcacagtttgaagagatagctaattagttttagtatccccgaagaaaagctttagtaaaaaagaagggtttattttaacaactgaccaccttggaaatatatggaagcaaaacctcatgaccatgcattgcccaagtaaataggcaaaccaatctcatgaagctaccctgaccatcttatgttgaaggcagcaatgaatgtgattgactgtgtttctgtgtgttcttaaaatggatctctagaagacaatactgaatgaaaaagcaatatcttaagttcagttttgacatggccaaacttgctagccagttgtatatcttgactgttagttgcgctgcatctagaagaatatacttggttgaatctgggattcctctagtcaattttataaagcactttcctgttaaaacttacaaggaaataataagcttataagctacattgttgatggtgacacttctgatgtactcttgttcttagtctttatcactatgaagttcagtctacctctcagtagacatataataactttaaaaaaaatagtaaagtatgtttgaggaaaaaaatcattgccttatgaaaaggaaaaacaaacttcatattagggtgatcgctattgttccagcctagtccctgctgaagtggtatcaatatttatgccttcggtttgctattgctgcatatagtatcacaacaaaaatgatgtataatgttgaagagagccttagtttagctaaagaagatggaaatctcttatattctaaggagctttcagctgatactaacgagataattgctccagttataaatagaactgattttttttatcttatatgtaccattcactgcggcctaattttaatacaatttgcatgtgcagactctagaaatgctggagaagaaagagtgctttcttcagaagaaggcttctgcagaagttgaaaaggctaaggattatacaaaagctaagaacaaaagcggtaagcatttctttcaagaaatttttttgtttgttaagaaacatttacacttatatcacattttttatgtaaatgtatataatacataaacttgttgaagatgtttgtttgttatgcattaatacttgaagaactttgcaactaggagattaagaagcctgtaaagaacaatagcagttaccctgttttgttatggccaaatacaagcttcctggtcatgtcttacattacccatcaactcatgtatgataaagagtagaaaatatgtgggtcagtaatcttgcacatcaactcatgtatgatacagagtagaaaaactgtgggtcagtaatcttgcatgtgtacctatggtaatggttccttaatgatgagaaaaatatttctcaagcttgtgacacttctataaactatatgagagagtacctgtttgttgcagctgcaattcagtgtctaaagaaaaagaagctgtatgaaacacaaattgagcagctagcaaatttccaattgcgagttcatgatcaggtgatgagatatatgggcgcatattcaatcttgacttttgaagcattctgatattccagaaggttgttataaattcaaattgacaggaaattgtttgttttggtagataataatgcttgagagcgcaaaggcaaccacagataccgttgatgctttgcgctctggatcatctgctgtcaaagctattcatcagtcagtgtaagtctctgattgccctccattcatggtttctgaaattgaatcgttaatacaatgaattcagaagcataagatgctctaaatgccaaatgtgtgtacatttctactgtattgttgttccttttgtctttcacattatgaacttaaatatagatacaaacttatagcaagtagttaaaatcagcaagagtgtcagttaatccatacaggaggcaacagtctagttagcatcaggcatgtgcttggatcaactgataacaacatttctttcacaggagtattgatgacattgaaaatgccattgaagaggcaaatgaacacacagaaaatatgaggcagatacaggaggcacttgcaacaccaattggcgcttctgctgatttcgacgaggtactgttcatctatctctttcccctctggcgtcaattaaaacgtgtgcaagatggtattatctaactcgaaataggcatgccaccaagacacaaaatacataattgcacacgatgccaattttccgaagatgtttgactctcatattttctattttgaaggatgaactagaagcagagctggaagatctggaggaggaagagctcgaccatgagctgcctgaaccacctcagagtacacgcatggaaccatcagcgagagttacaacttcatctcaaccagccaatgatttggctgaactgaccaaacttcaagcagagatggcgctttaatcacagtttggagggatttgtttgtattttgctgacatcctgtttgtgtagtgtactcggaaataacatgttgtaaattcagtttgttgtagaaaaaaacccttccttttataatttgttcttttctgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0123500, RefSeq:Os11g0123500