Os11g0126400

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Revision as of 08:58, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0126400| Description = Nucleoside phosphatase GDA1/CD39 family protein| Version = NM_001072156.1 GI:115483924 GeneID:4349645| Length = 6059...")
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Gene Name

Os11g0126400

Description

Nucleoside phosphatase GDA1/CD39 family protein

Version

NM_001072156.1 GI:115483924 GeneID:4349645

Length

6059 bp

Definition

Oryza sativa Japonica Group Os11g0126400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:1184611..1190669

Sequence Coding Region

1184611..1184886,1185020..1185082,1185257..1185385,1186368..1186424,1186505..1186803
,1187129..1187220,1187337..1187551,1187732..1187915,1188037..1188131
,1189162..1189218,1189962..1190016,1190545..1190669

Expression

GEO Profiles:Os11g0126400

Genome Context

<gbrowseImage1> name=NC_008404:1184611..1190669 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:1184611..1190669 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggctcatcatgtcatgagcatcgccgcagcagcagtagccatgcttctcctgatggcgtcgtcgccggcagtcgccggcacggcggtgctcggccggaagggcggcgccatgactgacgacgatgtcgtgggagggcaggcggcgacagggccggggaagtacgccgtgatattggacgccggcagcacggggacgagggtacacgtctttaggttcgacaggatgatggatcttctcaagatcggcgacgacatcgaggtcttcgccaagaataagacactaataaacaagtaccgtattctaataggatattattttgtggtaaaaattaatgtggttcctggactgagctcgtacgctggacgaccgcgggaggcagccaactccatacagcctctgcttgataaggccatccacgttgtccctaactggcttatgaagaaaactccccttaaacttggggcaactgctggactcatacttattggagatgaaaaggcaaaccagattcttgaagcggtcagagatgttgtccacaccaagagcaaatttcagtacaatccaaactggatcaatgttcttacgggatctcaagaaggatcttacatgtgggttgctcttaactatcttcttgatagactgggtgaagattactcgaaaacagtaggcgtgattgatcttggaggtggatccgtacaaatggcctatgccgtctcatcaagcattgctgctaacgccccagaggtgcctaatgggcaggatccctatattacagaggagtatcttaaagggagagattacaacatttatgtgcacagttacttgcattatggcgctcaggcttctcgcgtagagatactgaagagaaagaatgggccatttagcaactgcatgttgcgtggattcaaaggcaaattcacctacaacggggagcagtacgaagcaatggcagcaccacaaggtgcagactaccacaaatgcagacaagatgtggtgaaggcactgaacctagactcgccctgcgaaaccaaaaattgcagcttcaacggcgtgtggaacggcggcggcggcgttgggcaggacgagatctacgtcacatccagcttctactacatagcctccggtattgggttcatcgacagtgaggcgcccagtgcaaagtctacaccagcagcgtacaaggctgcatcagagaaggtttgtatactgagcatcgaagaagcgaaagcagcatacccaatagctcgtgatcacgcctacttatgcatggatctcatctatcaatacaccttgcttgtcgatggcttcggtttggaagcaacgaaggagattactctggtagagaaggtgaagcatggagagtcctacatagaagcagcgtggccattgggcactgccattgaggcaactactggacccagacttattggagatgaaaaggcaaaccagattctagaagctatcctgaagagaaagaatggaccatttatcaattgcatgctgcgtggattcaatggtctggatccaaataagaagataatgctggtaaacaaggtgaagcatggggagtactacattgacgcggcttggccattgggtacagctattgaagctgtatcacccaaaaaagggcttcaatag</cdnaseq>

Protein Sequence

<aaseq>MAAHHVMSIAAAAVAMLLLMASSPAVAGTAVLGRKGGAMTDDDV VGGQAATGPGKYAVILDAGSTGTRVHVFRFDRMMDLLKIGDDIEVFAKNKTLINKYRI LIGYYFVVKINVVPGLSSYAGRPREAANSIQPLLDKAIHVVPNWLMKKTPLKLGATAG LILIGDEKANQILEAVRDVVHTKSKFQYNPNWINVLTGSQEGSYMWVALNYLLDRLGE DYSKTVGVIDLGGGSVQMAYAVSSSIAANAPEVPNGQDPYITEEYLKGRDYNIYVHSY LHYGAQASRVEILKRKNGPFSNCMLRGFKGKFTYNGEQYEAMAAPQGADYHKCRQDVV KALNLDSPCETKNCSFNGVWNGGGGVGQDEIYVTSSFYYIASGIGFIDSEAPSAKSTP AAYKAASEKVCILSIEEAKAAYPIARDHAYLCMDLIYQYTLLVDGFGLEATKEITLVE KVKHGESYIEAAWPLGTAIEATTGPRLIGDEKANQILEAILKRKNGPFINCMLRGFNG LDPNKKIMLVNKVKHGEYYIDAAWPLGTAIEAVSPKKGLQ</aaseq>

Gene Sequence

<dnaseqindica>1..276#410..472#647..775#1758..1814#1895..2193#2519..2610#2727..2941#3122..3305#3427..3521#4552..4608#5352..5406#5935..6059#atggcggctcatcatgtcatgagcatcgccgcagcagcagtagccatgcttctcctgatggcgtcgtcgccggcagtcgccggcacggcggtgctcggccggaagggcggcgccatgactgacgacgatgtcgtgggagggcaggcggcgacagggccggggaagtacgccgtgatattggacgccggcagcacggggacgagggtacacgtctttaggttcgacaggatgatggatcttctcaagatcggcgacgacatcgaggtcttcgccaaggtaattaactaatctactactactataattaatctacctctctattgattactccctgggtgatttttttttaagaaaaaaaacataatctctctataaaaaagtataaaacgtattaattttatttcgttagaataagacactaataaacaagtaccgtattctaataggatattattttgtggtaaaaattaatgtgagtatattcgaaaatacttaattttaattacacatttatgtgtagtatagtaacgactgtcggtggaagtttcatcctaaccaactaaaataagtcatatatttttatatttttttgatagagaaagtacttgtaaagataaataaaaaaagtttctttttgttgttacaggtggttcctggactgagctcgtacgctggacgaccgcgggaggcagccaactccatacagcctctgcttgataaggccatccacgttgtccctaactggcttatgaagaaaactccccttaaacttggggtactacttacctaacaaatttcaatattgttcttcatctaatttaacaaaacatgcaccactgccatacaattattataacaaaatttaagttttctaaaagaacaggattcaattaaatatttgatttggcccctcgttctgagatctgtgcaactagttcaaaacaaatcaatataatatatacacaagaaaaggcaatgatattttgggctctgtgatgaagtagttttcttggatcctttacccagaagttgaatactccatccgttcaattttataaggcatatttgatttttaaaaattcaaactttgaagattttgaccaaagattagtaagcgtacaaataaatttagtttataaaagttaagcctatagatttgtatttcaaagagctttcacatatataatattggtttcatgcccattaagaatatatattatgagaaattgatggtcaaagtttagtcccgaagagtttttttattcgaaatacaccttacggcttgtttggtaactcgatggaaggggattgggagtttatacaagggaattgatgatgagattaagataagaatttgatttttaatcccaatatcttgtttggtagaggagatggaaattgatagagagtttagttggagattaggtcattaataaaaacggatggctgagatttgcttagacaaagtaaaggataaatttcctcccaattacctgcccctacccaggtattgaaaaggagggagttccttcctcaattccccatccctatcccaccaaaattctcatgtctcccaaccaaacaaaacacttaatagcctcatcactctaaactcccaatccctcctactccctccaactaaacgggccgttatagaactgaacggagggagtatcgatcattcaagctcaaaccattttcctactaaaatattgtaaaatgtttctaacttgctaatcaaacatttaaacctacaggcaactgctggactcatacttattggagatgaaaaggcaaaccagattcttgaagcggtgcgtatactttaagaaaaaaatatactacataaatgaaatgccttcagaccacttacttaatttgattcatagtacaggtcagagatgttgtccacaccaagagcaaatttcagtacaatccaaactggatcaatgttcttacgggatctcaagaaggatcttacatgtgggttgctcttaactatcttcttgatagactgggtgaagattactcgaaaacagtaggcgtgattgatcttggaggtggatccgtacaaatggcctatgccgtctcatcaagcattgctgctaacgccccagaggtgcctaatgggcaggatccctatattacagaggagtatcttaaagggagagattacaacatttatgtgcacaggtaagtaatttccttctctgatagtattgttttagatgcatgtcagtccacaacaatttggtgaataactggtgatgatgaacacctgcagcttttttttatctgaatttactgtaaataatatatgggaagcaattattcatagtttttattagagaaattttatgatctttgagaaagtacctagagatatcaagatttttcactgaaaattttactacctcgaagtacctggtatctagagctaccaaatttcacactagaaaatatggtatctccttaaggatttacacttttactaagatcaatcagcaataacctgcagttacttgcattatggcgctcaggcttctcgcgtagagatactgaagagaaagaatgggccatttagcaactgcatgttgcgtggattcaaaggtgtcaagctagttttccttatttagttcaagatgcaaatatagacaaatcaaatgtttggccaatgcttaataattaatcaagtgatgtttattttatcatgggacaaataaaaggcaaattcacctacaacggggagcagtacgaagcaatggcagcaccacaaggtgcagactaccacaaatgcagacaagatgtggtgaaggcactgaacctagactcgccctgcgaaaccaaaaattgcagcttcaacggcgtgtggaacggcggcggcggcgttgggcaggacgagatctacgtcacatccagcttctactacatagcctccggtgtacgtctcattaactaaccggtttatactggagtaatcaatttatcaggcagcgtataaagttggctatttacatgagcatatatataataactcctattcagatttaattctgtgtaaattatgaatattgtgatcaacataatgatatattgttctctccaataatgggaaaaatagattgggttcatcgacagtgaggcgcccagtgcaaagtctacaccagcagcgtacaaggctgcatcagagaaggtttgtatactgagcatcgaagaagcgaaagcagcatacccaatagctcgtgatcacgcctacttatgcatggatctcatctatcaatacaccttgcttgtcgatggcttcggtatgtacatatggacaaattaaactatcaatgaagaacttgtactatgtgccatgtgtatatatggatgtatatattcttgagaaatgacatgaatatatgcactgcatgatatattcaggtttggaagcaacgaaggagattactctggtagagaaggtgaagcatggagagtcctacatagaagcagcgtggccattgggcactgccattgaggttatctcgcccaaaaagaagcatcaagagcctggccggagtagctaggatatgaattaatgtactattgttgtgtgttgcgtgtgtttccagtttattgtaacttgcatgtatatttgttgctaagtaataatggagcttagcttaatttacattccttgaacggatgattgatcgatcgaacaagacgacgggtgatggagagcagaggccggcaacccaataatattatattgtgcaatgacaaaagtaggtccaaggtcaaggccccaaagaaaaattgttccccacagaaaaatggcccaataaattggtcagatacgaatctaagtgggccaagtaggcgtagtatgctgagaaagaaccttgttgttcaacctcgtcctccgccgctgcagctagcaatccttattaaattgatggctcgaagctatggccccaatttgatcccctccgtgaatgttcgacgttcgagagatatatgcatatgtatgcctctgcattttgctgatttgaatctacggttctagactagtatcaattacctttatctcaaaatataataatctagtacatacaggataagacatattttagtactataaattattctagtttgtatcttgtctactacttattagattgctacattttaaaatggaggtagtagtatgaatatcattttgtgcaaaaaggctagacgtccctaggctgcagcaaactccatactgcctctgcttgacaaggccaacaccgttgtccctgccaggcttatgaacaaaactccccttaaacttggggtacgtacaccactaaattgatttactcttcatctaattatcaaacaaaacctacatcaggaacttaatccaaaaatttttgatacgtactaatgtttctgtatgatgttttatctgacgaaatagtttcttaaaatacttaatgatgataatgtttcctctcgaacaaaatggcctgacttcttgcactctataaattttgttctttgttaattcaatcaaatacgtaggcaactactggacccagacttattggagatgaaaaggcaaaccagattctagaagctgtacgtataattccagaatgatatacatcatatcatacaaaattttaactcaaaaccatttcttgctttgattctaataaatctttattcttaataatccctttagtactctgggtcttaatacaggttagggatgtagtccacaccaagagaaagtatcagcataacccgaactagatcaatgttcttatgttcttgagggatcccagcaaggatcatacatgtgggttgctctgaattatctgctggataaattgggaggagactactctaaaactgtaggggtggttgatattggaggtggatccgtataaatggcatacgccatctcatcaaacaccactgctaatgctccaaaggtgcccgaaggaaaagatccctatgttgtgaaggagtatctcaatggaaaagattacaacatttatgtgcacatgtcaattaataagttcaccctcttgttaagtataatttgataatgttttacatctcagtccactacaagctagtgaataatatactacttagaaagtgcaacattaattcattcgttgcacacaaaatactggtgaatactgaataaactgaactattgaagcatgtaggttgtagcctgttaatatctgaacttactgtacaaaatatgggaaagaatgcatatataatctttttgaaccgtagtttattaagatcaatcagcaaattgcagctatttgcactatggcggttttgcatctcgcacgcagatcctgaagagaaagaatggaccatttatcaattgcatgctgcgtggattcaatggtatgcttattacttgttatgtttactatgcatcgatccattaatccttcaggattcatataatcaattaacgttttgtgcttaatgaactaagtgatttaatttgtgtttgctcatttggcaaaagaaaaggtaacttcacctacgacaagaagcagtacgacgcaacagcttagctgaacagttatgtaaatactcctaaatatgtacatttaattacctgataattttctctccaatgcatatattttggtgggaacgggaaaaaggttgggttcatagatagcgaggctcccagtgcgaagtcgacccctgcaacgtttaaggttgttgcagaaaaggtttgcagaatgagaagcaaaagcagtataccctaaagttcgtggtcatgcctacttttgcatggatctcatatatgaatactctttgctcgttgatggcttgggaacataaaaatgtttatataggacataaatgttcgataatataattgacatgagtgcactaatatatatttttggtgatcaggtctggatccaaataagaagataatgctggtaaacaaggtgaagcatggggagtactacattgacgcggcttggccattgggtacagctattgaagctgtatcacccaaaaaagggcttcaatag</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0126400, RefSeq:Os11g0126400