Os11g0128900

From RiceWiki
Revision as of 08:58, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0128900| Description = Multi antimicrobial extrusion protein MatE family protein| Version = NM_001189399.1 GI:297727928 GeneID:9266407| Len...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os11g0128900

Description

Multi antimicrobial extrusion protein MatE family protein

Version

NM_001189399.1 GI:297727928 GeneID:9266407

Length

2039 bp

Definition

Oryza sativa Japonica Group Os11g0128900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:1329909..1331947

Sequence Coding Region

1329909..1329989,1330113..1330199,1330281..1330399,1330489..1330727,1330830..1330886
,1331183..1331269,1331412..1331545,1331561..1331947

Expression

GEO Profiles:Os11g0128900

Genome Context

<gbrowseImage1> name=NC_008404:1329909..1331947 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:1329909..1331947 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaagtgcattggaaacattgtgtgggcaatcatatggcgccaagcaataccacatgttgggcatctatctacaacgttcatggatagttctcttgtgttgtgcagtcctcctcctcccgatatacctcttcaccactccactcctaatttttcttggccaggatcctaagatcgctgctatggctggcactatttcattgtggtacatccctgttatgatatccaatgttgggaacttcacgctccaaatgtacctacaagcacagagcaagaacatgattgtcacttatcttgccatgctcaatcttgggcttcacctttttctatcatggcttttaacggtccagttctaccttggccttgctggggtcatgggctccatgattctagtatttggtcagcttgcttttgtcttctttggtggttgccctctaacatggacaggattctcatttgctgcttttactgaactcggtgctattgtcaagctttcactgtcttctggagtgatgctttgtgtggaattgtggtacaacacaattttggttctcctcactggttatatgaagaatgcagagattgctcttgatgctctttcaatatgccttaatatcaatggttgggagatgatgatttctatagggtttttgtctgcaaaaggagtgcgggtggcaaatgaacttggagctggaagtgcaagaagggctaagtttgccattttcaatgtggtcaccacttctttctcgataggatttatgttgtttgtgctcttccttatctttcgtggaaggcttgtatacatatttactgaaagtacggtagtagcagatgcagttgcagagctttctcccttgctagccttctccaatttgttgaatagtattcaaccagtgctctcaggtgtcgctgttggatcgggttggcaaagtgtagttgcctatgttaatgttacatcatattacttgttcggtatccctattggtgtaatactaggctatgtgctaggatttcaagtaaagggcatttggattggtatgcttcttggtacactagtccagactattgtgcttctatttatcactcttagaactgattgggaaaaacaggtagagattgctcgacagagattaaaccgctggtctatggatgagaatgggagacaacagaatccgggtgaaaatccatga</cdnaseq>

Protein Sequence

<aaseq>MASALETLCGQSYGAKQYHMLGIYLQRSWIVLLCCAVLLLPIYL FTTPLLIFLGQDPKIAAMAGTISLWYIPVMISNVGNFTLQMYLQAQSKNMIVTYLAML NLGLHLFLSWLLTVQFYLGLAGVMGSMILVFGQLAFVFFGGCPLTWTGFSFAAFTELG AIVKLSLSSGVMLCVELWYNTILVLLTGYMKNAEIALDALSICLNINGWEMMISIGFL SAKGVRVANELGAGSARRAKFAIFNVVTTSFSIGFMLFVLFLIFRGRLVYIFTESTVV ADAVAELSPLLAFSNLLNSIQPVLSGVAVGSGWQSVVAYVNVTSYYLFGIPIGVILGY VLGFQVKGIWIGMLLGTLVQTIVLLFITLRTDWEKQVEIARQRLNRWSMDENGRQQNP GENP</aaseq>

Gene Sequence

<dnaseqindica>1959..2039#1749..1835#1549..1667#1221..1459#1062..1118#679..765#403..536#1..387#atggcaagtgcattggaaacattgtgtgggcaatcatatggcgccaagcaataccacatgttgggcatctatctacaacgttcatggatagttctcttgtgttgtgcagtcctcctcctcccgatatacctcttcaccactccactcctaatttttcttggccaggatcctaagatcgctgctatggctggcactatttcattgtggtacatccctgttatgatatccaatgttgggaacttcacgctccaaatgtacctacaagcacagagcaagaacatgattgtcacttatcttgccatgctcaatcttgggcttcacctttttctatcatggcttttaacggtccagttctaccttggccttgctggggtcatgggctccatggtcattgcctactagattctagtatttggtcagcttgcttttgtcttctttggtggttgccctctaacatggacaggattctcatttgctgcttttactgaactcggtgctattgtcaagctttcactgtcttctggagtgatgctttggtaagtaacaattgtgtttatgcatacatatgaaatttcagatatgcaatatgttagatgctaaatgttgaccaacatattgtttagagctaattaattgctcatgtggtttattcttttttctttctcatttgcctttcagtgtggaattgtggtacaacacaattttggttctcctcactggttatatgaagaatgcagagattgctcttgatgctctttcaatatggtaatatattccactttcaattgttgcataatggtttagacaataaaagatggggcatttgcaaatttgccaccggttttttcaatattgcaaggatgccactcgaatgacagttctaatggcatttttgcaattttctagtggcagttttgcaataacgattcaaagtagtggtaaatttgcaattgccccttttatgggatcatgtttgtgggtacattgctgtattgttctttgttgttcctttagcagttgaaaaacttgcttatttagcgttattgtttttccatgtgtagccttaatatcaatggttgggagatgatgatttctatagggtttttgtctgcaaaagggtaacttagtgatcttacttgttacatgctaagtggttcatttgatcaatcattcatgtcacataaatttcatttgacatacctatacatgtacatttttagagtgcgggtggcaaatgaacttggagctggaagtgcaagaagggctaagtttgccattttcaatgtggtcaccacttctttctcgataggatttatgttgtttgtgctcttccttatctttcgtggaaggcttgtatacatatttactgaaagtacggtagtagcagatgcagttgcagagctttctcccttgctagccttctccaatttgttgaatagtattcaaccagtgctctcaggtatggtattccatttaaaagaatagcaaatatatcaatataatttgaaattgcacattggaattataatattttataatcatctataggtgtcgctgttggatcgggttggcaaagtgtagttgcctatgttaatgttacatcatattacttgttcggtatccctattggtgtaatactaggctatgtgctaggatttcaagtaaaggtgaggaaccgattgataaaatttcattagtcaatttgggacttaaattttgtttctcaattccatttgttgtttctatagggcatttggattggtatgcttcttggtacactagtccagactattgtgcttctatttatcactcttagaactgattgggaaaaacaggtatgttaattgctcacaattttacttatctttttttattaaatctcttaacccacatagcatgtgggtctctctagatttttttttctcatttaatgatgtgtttcatgttcctttttctaggtagagattgctcgacagagattaaaccgctggtctatggatgagaatgggagacaacagaatccgggtgaaaatccatga</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0128900, RefSeq:Os11g0128900