Os11g0141000

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Revision as of 09:00, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0141000| Description = Similar to PP2A regulatory subunit-like protein| Version = NM_001072246.1 GI:115484104 GeneID:4349739| Length = 4149...")
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Gene Name

Os11g0141000

Description

Similar to PP2A regulatory subunit-like protein

Version

NM_001072246.1 GI:115484104 GeneID:4349739

Length

4149 bp

Definition

Oryza sativa Japonica Group Os11g0141000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:1876609..1880757

Sequence Coding Region

1876725..1876812,1876863..1876885,1876989..1877111,1877224..1877310,1877448..1877552
,1877740..1877901,1878476..1878511,1878641..1878712,1879317..1879594
,1880318..1880344,1880492..1880552

Expression

GEO Profiles:Os11g0141000

Genome Context

<gbrowseImage1> name=NC_008404:1876609..1880757 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:1876609..1880757 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gaatggtcgaggtggaggaagtcagcaacaagatgcaggtgcagatgcgcctccaccccgccgcggcggcggaggaggaggacgccgacctccagctcctccctcgaccaggaagggatccgcaagggggtcgacctgctgcggcggtgcgacgagatggtcagtaaggtcggcctcttctcctccaacgagaccaaggatgacatctccaccgccaacctcaaatacctactcgtaccgtactaccttggggaaatgactgaaagggtagcgcaggaagatcggatcccagtccttaaggcgtcgcaggatcatttgaaggaattcatttctatctgtgaagcactggagcttatatcagaggatgagcttgaaatatctaggcagaagcaacctgataccatggcaaatcgaagagcacagaaggttgcacggttcaagcgccaaaaggctgcagaaacaaagctcctagaaatcaaggagaggaaagaaaggcgtaggcggtcattgagagcagctgctttatcagctcctattgaagctggggaggaagatgcttttgaggatgatggagaggaagaaagagaggcatggttagctactatctcattggctctatgcaaggcttttgaccttcttgacatgttaaagaaggaagaagaaatgcttccggcagtaaaagaaaggaaagcgaaggatggtaatgcatttgctcgtgaaatgcttgatgaacgtacaaaaagggctgaagcatggcaccataatgctgccaaccgtgcaccatactccaaaccagctgatccaatcacttgtgcaacatttgctcaagatgtcattgaaggtagagcaagtgtttcacaagcacatgagcacaaacaccagccgctgatatttggccctgcaagtcttgttggtggaggactaaccagtgaaagagagagaatggcagcacaagtttttcagccaagttataggttgccaacgatgagcatagaagaagctgactggaaggacgataaccctcgtggtgcaggcaacaagaagctcactccctgtggctaa</cdnaseq>

Protein Sequence

<aaseq>EWSRWRKSATRCRCRCASTPPRRRRRRTPTSSSSLDQEGIRKGV DLLRRCDEMVSKVGLFSSNETKDDISTANLKYLLVPYYLGEMTERVAQEDRIPVLKAS QDHLKEFISICEALELISEDELEISRQKQPDTMANRRAQKVARFKRQKAAETKLLEIK ERKERRRRSLRAAALSAPIEAGEEDAFEDDGEEEREAWLATISLALCKAFDLLDMLKK EEEMLPAVKERKAKDGNAFAREMLDERTKRAEAWHHNAANRAPYSKPADPITCATFAQ DVIEGRASVSQAHEHKHQPLIFGPASLVGGGLTSERERMAAQVFQPSYRLPTMSIEEA DWKDDNPRGAGNKKLTPCG</aaseq>

Gene Sequence

<dnaseqindica>117..204#255..277#381..503#616..702#840..944#1132..1293#1868..1903#2033..2104#2709..2986#3710..3736#3884..3944#gacgtttccagtttcccttccttccttcctccgcgtcgcttcccttccttcgcgcggcgctgctccggtagggttttagccggcgatctctcccctctcgcgcgctcggcgactgagaatggtcgaggtggaggaagtcagcaacaagatgcaggtgcagatgcgcctccaccccgccgcggcggcggaggaggaggacgccgacctcccgctccccgccctcttcgacaaggcgtcccacctccactccctcgcctccagctcctccctcgaccaggttttccttcgattcacccccctttctcctcatccccatcaaccctctcgtggcggttttgtgcgagcgctcactgtgattgcttggtttgggatatttgcaggaagggatccgcaagggggtcgacctgctgcggcggtgcgacgagatggtcagtaaggtcggcctcttctcctccaacgagaccaaggatgacatctccaccgccaacctcaaatacctactcgtatgtttgtttcctgcactacatctgcgtttatattcgtttctcttaccgtatcatgtttgtgcatctgcgacatgtggttatatctgtgattccgattgattttcttcaggtaccgtactaccttggggaaatgactgaaagggtagcgcaggaagatcggatcccagtccttaaggcgtcgcaggatcatttgaaggttatatcagtttgtcctgtcacatttagttgatttggtgcatatttgtcatgtctttcttatgcccttttcaattgggagcactctgtcatcacaacactcatgtttctcatgttttaatcactacggttacacaggaattcatttctatctgtgaagcactggagcttatatcagaggatgagcttgaaatatctaggcagaagcaacctgataccatggcaaatcgaagagcacagaaggtgagccttgacgaaatatttttctcaaatatgttaaaggggtcatcaatcattctgcaatttacgaacacaataaactgggatccaaatctattattgagactgcaaaatctgggactcataatctgcttgaccttttccaaagtcggttaatttccactctaattttcttgtttgccgaacctaggttgcacggttcaagcgccaaaaggctgcagaaacaaagctcctagaaatcaaggagaggaaagaaaggcgtaggcggtcattgagagcagctgctttatcagctcctattgaagctggggaggaagatgcttttgaggatgatggagaggaagaaagagaggttagcagttagcaccaggcatttagaacccatttacgtagcaaatctgatcttgtttaccaaatggaaacatcgtgatatattcttaaattaccacatagcatatttgaaaataccccaaactaaaattagctacaatgtactagaagtggaagaagaatatttactttttccagaaaagagaaggaaaggaaaggctttgttctgttcaataaaagatggaatttgacaaatttgatgattcaagataagttttaaaaaatcccatagggaactgatcacatttcctgaattgacccatttttgttcaaatgaaacacacagcgtatttattctgtactggcagattgtcaccaccaatctttttcctgtaacaatatgatgctcattgcctttcctgtgctttttatatacgatctcttacttttgtgggcaatcaaccttttgggatctgtcgatgtgtgcttccaaagtttgggttccatgccatgcctgtcataactcactttgatgtacaaatgataaatggttatgccgtggttttgattctttttttttttgttctatgttgcaggcatggttagctactatctcattggctctatgcaaggtttgtgttttatgggcaagaatgattctcttatactgcttgggatgtttatttgcattcttttaagctactgtgctcgctttggttatcctgatcatcagacgcactcatttctacttcattttataggcttttgaccttcttgacatgttaaagaaggaagaagaaatgcttccggcagtaaaagaaaggaaagcgaaggtaaaacaaatgaataaagtttgccaatttctcgtcaatagtatctttggttgatcctttccagtatcatattggccttttaacttttcttctataaccgttctgtacatttctggttgtgtttttactgatacaattattgaacttcgctttgccttgagcttatgttgtagtagagcttaccttcaccaagtagaccatgaccaagtaggtagctggatagttgtatacagtaattctgtttgaaaaaaattatacaccggattctgagttaggagatacaattaaattaattgtcataatatgataataacttgccattgcaagtatttcatcacacttctctctctctctctctctctctcagtgtctgcagagtgctgagtgttttgttgttactacatgcaagtaatattagatgtttgattttgttttcatgatccttttatagcactcgatggtagatgttctaccgtaagaaaaaaacaattagatttttttttatctttgcttcctttgtgttgcatgtctgtttcaataaattctgcacttacatggaggtttcctttagtaatgaaataatttcctgctcatgatgttttaggatggtaatgcatttgctcgtgaaatgcttgatgaacgtacaaaaagggctgaagcatggcaccataatgctgccaaccgtgcaccatactccaaaccagctgatccaatcacttgtgcaacatttgctcaagatgtcattgaaggtagagcaagtgtttcacaagcacatgagcacaaacaccagccgctgatatttggccctgcaagtcttgttggtggaggactaaccagtgaaagagagagaatggcagcacaagtttttcagccaagttataggtatgctttaaaatactactacatacctggctgaaactgcactgcttctttttattgtgatggtgaacttcggttatggcagaatgtggaggggcattatttgtggcaacctttaatgcatcatactagtcatactttgatatatttgtaggaactttgacctcctttttcgttgagcattactcgatgagcaaattatttcttggtaaatttgtaaagtggtcctttacattgtatttgcttcaccacattagtatgtgaccatgtttattcaatcgtaggtgtttccttgtcctgttgttgcatgttctgccataagtccgtgacaaattcgtggtttacactgttgatatcattcatttttttcatgctggaaaggcaccatgtttaaatttgctattcagtgcaatactagattcactgacaataaactgttgtcttgtactctgttgtgactacgaacacttggtgcaatcgtatagatgctgagatagtgattcgtaggtgtgaccttatgtttagtcataatctatgaaaaattccaagaaatgatactattctgctgcaatttctacatttgctcataaaaaacattagatttcccctgcagcaattaagtgttgagctatagatcatctctattaaagtgatcttgcattgttcagtcctaaaagttagtgaaaatatgcatatgagactatcctttgatccaataattcttaggttgccaacgatgagcatagaagaagctggcttacgtgagatgaaaatgatggagaaatggcaagaaagaactgccaagatgattcaagaatcaaactccgcatggcacaaggatggcagtcggtcagcccaagaggacgaggacgccgaagaggagaaagcgagaggatgggatgactggaaggacgataaccctcgtggtgcaggcaacaagaagctcactccctgtggctaaattatatgctatggcaattctattgaacttacatctgaaactgaagctcgtgtaaaaatatgtggtttttactaactttccttactgcggcatttgttgattgctgagtaataatgtgttccatatgtatattataattgtgcatggtttccttctgccaatatatgggcaaccaagtaatgccagaaaagctgatttgagaagc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0141000, RefSeq:Os11g0141000