Os11g0148700

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Revision as of 09:00, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0148700| Description = The start codon is not identified.| Version = NM_001072283.1 GI:115484178 GeneID:4349776| Length = 4987 bp| Definit...")
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Gene Name

Os11g0148700

Description

The start codon is not identified.

Version

NM_001072283.1 GI:115484178 GeneID:4349776

Length

4987 bp

Definition

Oryza sativa Japonica Group Os11g0148700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:2229577..2234563

Sequence Coding Region

2230170..2231122,2231231..2231905,2232025..2232053,2232160..2232620,2232700..2232824
,2232908..2233205,2234111..2234563

Expression

GEO Profiles:Os11g0148700

Genome Context

<gbrowseImage1> name=NC_008404:2229577..2234563 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:2229577..2234563 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tctgatgaaggtaaggctccaacttcccatctgacaacaaaccaaaggaagaaactggctgctgactgtgctctacaagtgaaagcattttcctcagcagccttacaatttgtttggccaagtactgaaaagaaggttatggaagtcccaagagatagatgtggttggtgccttgcctgtcaaagttcagcaggtggaactaaaaaagcttgttttcttaacatggccactgcaaatgcttctaaaggatctgctcgaattcttagtggcatgcgtttaatcaagaattctgatagccatttccccagcattgttacttatttaagccacatggaggaaagtttgcgtggccttttagttggttcactacaagatgtgcagcggagacaacagtggtataatcaactaaaagatgcttccaactgtggaaatataatacccctcttgcttgaattggaaagtaatattcgtggtgtagcattttctactagctggctgaagctaatagatgactggcctgtggaatctcctagtgcatctgctggtgcatcccgtcctgcagcataccaaaaacgtggaactggtggaaggcggggcagaaaacgttcaatggcatctgaatctgctcctgttactgatgatgacaacagctggaaagaagtgaattggtggagtggaggaaatgtttcaaagcgtatcttacagaggggggctctaccaattttgaccattagaaaagctgctcgtcaaggtggaaaaaaaaggatgttcagtgtgtcttatcatgaaggctccaattttccaaggcggactcggcaacttgcttggagggcatgtgttggattaagccagagttcatctcaacttgctctccaggttagatatcttgattcccacataagatggaaggagttcatccctccagatcaaattccttcagaagggaaaagtgtagattctgactattctgttctcagaaacgcagttgtttgtgataaaaaaatagttgacaataagataagatatgcacttaagtttcccaaccagaagcatcttcctgtccgtgtaacaaagaatattttggaagcagaagataatcaggatggggatgggaaattttggttttctgaaaaccatatcccactatacttgctacgagaatttgagcagaaagctggggttagctccttgcctactccaggaatgttagattctaactgttttgccaatttctaccaaaggcgagtaaaatcatcaattggagatgttttcttctatctgcttcacaagggtgatgtatatccttgcacctcatgcaagaaggatgtttccttcagggatatcataaaatgcagctcttgtcaaggtaattgtcataaagagtgcacattaaggtctgttggtagcaaagagggcaatgctgcttccagtttaacatgcaagttgtgccttcagaagcgtagtcttatgcttacaaattacaatacaaacgcaagtttcatcctacctcaacagaagagtaatgtccatcacgcagtggcagctcccaaaataatctttaaggttggttcttcccattccgctgaaccagccacaaaggttgaagctccgccaatcgtgaaggtagaagcccagccagtggtcaagaaggaaacctggccagttgtgaagatggaaacccagccaactgcaaatgtagaagcacagccaactgcaaaagtggaagcctttccaatttcgaatttggcaactcagaataatgcaggggcgcaagtccagcctaagacaaaatctaaaaaacccaagccagaaaaaccgagaaaatccaagaagactgaagagatcaaatactttggtctcgtgtggaagaaaagcactaatgacaaaaataataatgaaaattctggagaagtgttcagggcgaatgatgttatcctaaaaggcaaggatggtgtaggttcatcaataaaacctacttgctgtctttgtaataagccttattgcccagatttcctgtatgtccgctgcgagaggtgcaaaaagtggtttcatggcgatgccttgcaacttgaggaagaaaagatatttgaattggtttcataccgatgttgcagatgccgaaggcgagccataccaaaatgtcctcattcagatgattataagaagcctgaaccagaatacagtgagcaaacagtcgctacgtcatcacagtcaactatgctttctagtgaggagaattttgctgtagcagatcaagatccactgcttgcttcatatggcagagttgaaccgtttggagcacaaacaatggatgctgatttatcgatgaacatgatgagctttaacccaggaaatcagaaactatcagtaagaaggggacaaaacaaaaattgtgaatatgttgaccaatccagtatacatgtggatgactattatatccagaatcaacctcaagggaatgcaaacatcaatttcagtcactcgaatgaattctctttgtcagaggctgatggtgtggatgcttcagagctgttgggatgggatttttctcaaggaaataccagtgctgccccttctgatttcgcagctaattgcccgtggaatgacatcagctgtggcagcgttgctggtgatgaatatgaaccacagacttatttctcattcaccgaactacttgaagctgatgatacacagttcgataatacatttgggatgtctaatagtgtgcaagatgatggtgaccaacaaggaattggttttgatgaaatggctttcatgatggaagatggggcctcaaacatgcctttcccagctattgactccgcctctgacgaggtagcatgtgacaggtgcaagaatcctcagccgccacctgatctcaaatgcgcagtatgtggactgcagatgcaccgtcattgctcgccttgggaggatggtgaacagccatcagatagtgccgattggagttgtggtgcctgccgggagtggcgatga</cdnaseq>

Protein Sequence

<aaseq>SDEGKAPTSHLTTNQRKKLAADCALQVKAFSSAALQFVWPSTEK KVMEVPRDRCGWCLACQSSAGGTKKACFLNMATANASKGSARILSGMRLIKNSDSHFP SIVTYLSHMEESLRGLLVGSLQDVQRRQQWYNQLKDASNCGNIIPLLLELESNIRGVA FSTSWLKLIDDWPVESPSASAGASRPAAYQKRGTGGRRGRKRSMASESAPVTDDDNSW KEVNWWSGGNVSKRILQRGALPILTIRKAARQGGKKRMFSVSYHEGSNFPRRTRQLAW RACVGLSQSSSQLALQVRYLDSHIRWKEFIPPDQIPSEGKSVDSDYSVLRNAVVCDKK IVDNKIRYALKFPNQKHLPVRVTKNILEAEDNQDGDGKFWFSENHIPLYLLREFEQKA GVSSLPTPGMLDSNCFANFYQRRVKSSIGDVFFYLLHKGDVYPCTSCKKDVSFRDIIK CSSCQGNCHKECTLRSVGSKEGNAASSLTCKLCLQKRSLMLTNYNTNASFILPQQKSN VHHAVAAPKIIFKVGSSHSAEPATKVEAPPIVKVEAQPVVKKETWPVVKMETQPTANV EAQPTAKVEAFPISNLATQNNAGAQVQPKTKSKKPKPEKPRKSKKTEEIKYFGLVWKK STNDKNNNENSGEVFRANDVILKGKDGVGSSIKPTCCLCNKPYCPDFLYVRCERCKKW FHGDALQLEEEKIFELVSYRCCRCRRRAIPKCPHSDDYKKPEPEYSEQTVATSSQSTM LSSEENFAVADQDPLLASYGRVEPFGAQTMDADLSMNMMSFNPGNQKLSVRRGQNKNC EYVDQSSIHVDDYYIQNQPQGNANINFSHSNEFSLSEADGVDASELLGWDFSQGNTSA APSDFAANCPWNDISCGSVAGDEYEPQTYFSFTELLEADDTQFDNTFGMSNSVQDDGD QQGIGFDEMAFMMEDGASNMPFPAIDSASDEVACDRCKNPQPPPDLKCAVCGLQMHRH CSPWEDGEQPSDSADWSCGACREWR</aaseq>

Gene Sequence

<dnaseqindica>3442..4394#2659..3333#2511..2539#1944..2404#1740..1864#1359..1656#1..453#tctgatgaaggtaaggctccaacttcccatctgacaacaaaccaaaggaagaaactggctgctgactgtgctctacaagtgaaagcattttcctcagcagccttacaatttgtttggccaagtactgaaaagaaggttatggaagtcccaagagatagatgtggttggtgccttgcctgtcaaagttcagcaggtggaactaaaaaagcttgttttcttaacatggccactgcaaatgcttctaaaggatctgctcgaattcttagtggcatgcgtttaatcaagaattctgatagccatttccccagcattgttacttatttaagccacatggaggaaagtttgcgtggccttttagttggttcactacaagatgtgcagcggagacaacagtggtataatcaactaaaagatgcttccaactgtggaaatataatacccctcttgcttgaagtgagttatagggttcgagtcaagtttgtttcagcatccattgatatttctcaatattctacaattattcatgatatatatagtttgtagtttataactctcaaagtgtgccatcatgtttaacatattctaaaatttctctgttactaggcaaatccttagttatatacatgccagtcaaatgtgttgtatcatgaattctttaaacctgaaacttgattgtatcccacagtagtagcagttaacatttataatcatacaactactgggatatgtatttccagtgttttattatgaattatttgaaccctaggtatgggctagtttcttgttaacttctttcaaacctgagcttatcttattttgcctggatgatgccatgactgatgggaaaataaaaggaaatattccctctgtcccaaattataagggattttgggtggatgggatatatactagtactatgaatctggtagcacatttttcagtcttgctatgcatcttgggctagatatatattttacatgtagggtttgccactcttcataagtgtaaagtgccatttgaggatcagccactctctttctcactgacatgaggcattcgagtgacaaattctcatccaccaatggtggagagtgacagaccccaaaatcaactcttggatgataaaatgaactcgatgctgaaattcttagtgggtagagcatggaattttgaaatacagtgtcatattttgcttaattatatcttgtgctaagtgcttctggagaatcaagttcgacatgcaataaataattgtaaaataaacttgaaatgttgtttcaacaagtgttggtgtaaaataaatacaaatgacaggttgagatcttattatctatttgttctttgcatcttttgtgcagttggaaagtaatattcgtggtgtagcattttctactagctggctgaagctaatagatgactggcctgtggaatctcctagtgcatctgctggtgcatcccgtcctgcagcataccaaaaacgtggaactggtggaaggcggggcagaaaacgttcaatggcatctgaatctgctcctgttactgatgatgacaacagctggaaagaagtgaattggtggagtggaggaaatgtttcaaagcgtatcttacagaggggggctctaccaattttgaccattagaaaagctgctcgtcaaggtattgcacatgtctgtctgttattattatccctttctctgtctcaaggtgagaacaagttgacatgatctgtcgctcactaggtggaaaaaaaaggatgttcagtgtgtcttatcatgaaggctccaattttccaaggcggactcggcaacttgcttggagggcatgtgttggattaagccagagttcatctcaacttgctctccaggttagcaccttctatcatgatgttttgaagtatttagatcaagctatatgtattcctaatatacatatctatctcacaggttagatatcttgattcccacataagatggaaggagttcatccctccagatcaaattccttcagaagggaaaagtgtagattctgactattctgttctcagaaacgcagttgtttgtgataaaaaaatagttgacaataagataagatatgcacttaagtttcccaaccagaagcatcttcctgtccgtgtaacaaagaatattttggaagcagaagataatcaggatggggatgggaaattttggttttctgaaaaccatatcccactatacttgctacgagaatttgagcagaaagctggggttagctccttgcctactccaggaatgttagattctaactgttttgccaatttctaccaaaggcgagtaaaatcatcaattggagatgttttcttctatctgcttcacaagggtgatgtatatccttgcacctcatgcaagaaggatgtttccttcaggtttttgttctacaccttattgctttgttcattctgttattgttttctttataagatgctgctttatctttatttctcatatatctttgttgttaatcttatgtagggatatcataaaatgcagctcttgtcaaggtacgggtttctagcataccccctttttttttgctatttccttaaagtagagaataactgataaattactgacgtttttccaatatgaactcacaatagtaactaaaacaatgtttcaggtaattgtcataaagagtgcacattaaggtctgttggtagcaaagagggcaatgctgcttccagtttaacatgcaagttgtgccttcagaagcgtagtcttatgcttacaaattacaatacaaacgcaagtttcatcctacctcaacagaagagtaatgtccatcacgcagtggcagctcccaaaataatctttaaggttggttcttcccattccgctgaaccagccacaaaggttgaagctccgccaatcgtgaaggtagaagcccagccagtggtcaagaaggaaacctggccagttgtgaagatggaaacccagccaactgcaaatgtagaagcacagccaactgcaaaagtggaagcctttccaatttcgaatttggcaactcagaataatgcaggggcgcaagtccagcctaagacaaaatctaaaaaacccaagccagaaaaaccgagaaaatccaagaagactgaagagatcaaatactttggtctcgtgtggaagaaaagcactaatgacaaaaataataatgaaaattctggagaagtgttcagggcgaatgatgttatcctaaaaggcaaggatggtgtaggttcatcaataaaacctacttgctgtctttgtaataagccttattgcccagatttcctgtatgtccgctgcgagaggtgcaaaagtaagcccgtctatcattattgtaggcttgtagcttcaagttatgtatatatatatatgtgtgtgttatctatcagattttaacttcttgatattcttctttgttcagagtggtttcatggcgatgccttgcaacttgaggaagaaaagatatttgaattggtttcataccgatgttgcagatgccgaaggcgagccataccaaaatgtcctcattcagatgattataagaagcctgaaccagaatacagtgagcaaacagtcgctacgtcatcacagtcaactatgctttctagtgaggagaattttgctgtagcagatcaagatccactgcttgcttcatatggcagagttgaaccgtttggagcacaaacaatggatgctgatttatcgatgaacatgatgagctttaacccaggaaatcagaaactatcagtaagaaggggacaaaacaaaaattgtgaatatgttgaccaatccagtatacatgtggatgactattatatccagaatcaacctcaagggaatgcaaacatcaatttcagtcactcgaatgaattctctttgtcagaggctgatggtgtggatgcttcagagctgttgggatgggatttttctcaaggaaataccagtgctgccccttctgatttcgcagctaattgcccgtggaatgacatcagctgtggcagcgttgctggtgatgaatatgaaccacagacttatttctcattcaccgaactacttgaagctgatgatacacagttcgataatacatttgggatgtctaatagtgtgcaagatgatggtgaccaacaaggaattggttttgatgaaatggctttcatgatggaagatggggcctcaaacatgcctttcccagctattgactccgcctctgacgaggtagcatgtgacaggtgcaagaatcctcagccgccacctgatctcaaatgcgcagtatgtggactgcagatgcaccgtcattgctcgccttgggaggatggtgaacagccatcagatagtgccgattggagttgtggtgcctgccgggagtggcgatgatgagcttcaaactttcattgcacttgttacctgagagctgcatagagcagctgtctaattacagtcgaaggtaagcacagcattttatctttgaatactacctgaatttttcagtttaacaagaatttggtttatggttctgagcataatttgtgtttaggtggatctgtagaagaaatctcatgaagcacaccaaggaggagcgagggaaaatttcccttctagctatttggcattgtcagtgccactgaccgtttgggagttgtggcgttgattactggacacaccttagcaatatggtttgacaaccaaggttttcggcgaactgtacatatattaatgaatggttgatcgaaaaagccgttttccattcatctaggcggttttctttttaaggggaggattataggattagattgctcttagttacgtgttatataggagctctggactttggaagccatgttcctgacaatgtgttgtcttggattcttttgcccctttttttccctcagaaaaagaatagaagtgcctctttctccgagtggatgcgatatccttgatatatatagcctcggctttttcctctgatt</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0148700, RefSeq:Os11g0148700