Os11g0150200

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Revision as of 09:00, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0150200| Description = Plant protein of unknown function DUF868 family protein| Version = NM_001072290.1 GI:115484192 GeneID:4349783| Lengt...")
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Gene Name

Os11g0150200

Description

Plant protein of unknown function DUF868 family protein

Version

NM_001072290.1 GI:115484192 GeneID:4349783

Length

6032 bp

Definition

Oryza sativa Japonica Group Os11g0150200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:2316958..2322989

Sequence Coding Region

2321618..2322634

Expression

GEO Profiles:Os11g0150200

Genome Context

<gbrowseImage1> name=NC_008404:2316958..2322989 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:2316958..2322989 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgagcgcgtcaagcctgctgctcccgtcgtccgtgcgggacttcgcctcctgcatcggcgacggagccgtccgcgtcgccgacgtcgcggcgtgcaccgcgccgtcctccacccgcgtctccacctgctcctcctcctcctccaccaccgcctcctcctcctccccgacgctctccgtcaccgtctcctaccgcgccaccctgctcgcggcccccgcgccgccgctgcagctccgcctcacgtggggacactccccgctcggccccacgctgtcgttcgcgccgtcgcccaccgcccgcgccatccagctccgacggaggaggggctcccgctccctcccctcgggctccagctccggcgacgagaacgggggtggtggtgatgagtccggtactaccacgccgcccccgcccccgccgctcgcgctgttctgggatctcaccgccgcgcggtacgaccccgcggcgtcgtcgccggagccggtgtccgggtactacgtggtggcggtggccagcgcggaggtggtgctcgcggtgggcgacctggcggcggagttcgtcaaggctaagttcgagggccagatcccgcgcgcccgcgtcgcgcccgtctcgcgcgtggagcgcgtcgtggtgtccgacccggcggcgatgcacgccgcgcgcgtccggttcgcggagggcgggcccgagcacgaggtcagcgtcagctgcgcgcccgccgcccccggctccggcggcggaggggacgagctgtgggtgtgcgtcgacggcaagcgcgcggtgcaggcgtgccggctgcgctggaacttccgggggaaccagacggtgttcgtcgacggcgcccccgtcgacgtgatgtgggacctccacgggtggtggttccgggagccgccgggctgcgcggtggtgatgctccgggcgaggagcgcgctcgagagccgcctatggctggaggaggaggccgccgcgccgggattctccctcatcgtgcaggcgttcaagtcgccaccctga</cdnaseq>

Protein Sequence

<aaseq>MVSASSLLLPSSVRDFASCIGDGAVRVADVAACTAPSSTRVSTC SSSSSTTASSSSPTLSVTVSYRATLLAAPAPPLQLRLTWGHSPLGPTLSFAPSPTARA IQLRRRRGSRSLPSGSSSGDENGGGGDESGTTTPPPPPPLALFWDLTAARYDPAASSP EPVSGYYVVAVASAEVVLAVGDLAAEFVKAKFEGQIPRARVAPVSRVERVVVSDPAAM HAARVRFAEGGPEHEVSVSCAPAAPGSGGGGDELWVCVDGKRAVQACRLRWNFRGNQT VFVDGAPVDVMWDLHGWWFREPPGCAVVMLRARSALESRLWLEEEAAAPGFSLIVQAF KSPP</aaseq>

Gene Sequence

<dnaseqindica>4661..5677#tttattcaatgcacataaggatacctatttcttgttgccagaaaggtcctaatcctactgcaggtactgtaaactgttcaagatggggttatctcatgctttaggctactaatatgaagccatatacatcaatggcttccccaaaagggtataatgatgagcactaacaatttacctatccgtatgggcagtacaacttatctgtagagttccaagacaatgccagtttatgttactcccctactcggtaattgtgggtgcgtcaacttgatttcagttttggcaaggtagtatagaatggaatcatattactgttgaaggattctttaatgtcaagctaaacaatgggcccatcatggaatggaaacttctcacactgatctgatcagcagattattattttgagcaatttcaacttgcagctagcatggggatgttccaacttcaactgcacagaagaagacaagtttgttttcaactggtatgcctttatttggaaatctgaatttttatccaatatttctctcttatttttagtaggtatgatcagagaaggctttgtactctctcgtcaactgccttgttgcagtcagttagagttatatatattcactcgaactgcataatattatctagcagcttgttcagtagattagaaacataaatgcctcctacgtcaacttgtgcttgctgtatctttaaaaactgcagcgttatcttttcctagtttaacaaaaagacaaaagaaactgtccccgctacacacggtttgatggttatgctgctaaaaatatcatgcagcatgatatattactgtttgcctcttcgttttgttggcagttggcaatgcagtcgtttatgctcttgccaactggactaaatccactggagctgtagatcattccgtgtgaagacccacattatcggagtatcacaaaatagacattataaacttaagtatattattttgtttttgctggttgaaaactaacaaattgcggtcgatgattttcagggttccttgttcccttgctgtcagctgaatgtctcatttcagctttaccacgtatgcctcttttgtgttttctgtacttataatatttgcattgtcaagttgtcctagtttagtcaaaaagagaaaaaaaaaagaaagtaagaaaagaaaccgtgttcagtgtacattggtcatcttcagttattaaaacatacaagtagactatttgcctcttccactttctggcaatacatttatcttcttgccagctggattgaatcatgtagatcgttgtgtgaagagccaccctatctgatgtatcagatgaaaaaacctattaacttgctgtgttaacatttgatttttgttcttccccggttgtcgaaagctaaagagaactgctgtctatcattttcagggatcctttgctttccttattttcaggtgagtgtcccatttctccattaccaacttaatgcaagggacagccctttttttctcatcgaatctaaaaacaaagtcaacaaaccttgctccaattttctaatgcctctgggatcaagtgcctggttttccgtgcccgatgaatgaatcacactctcacaccccaaagcagattgtcctcccatgactcaatttagtatacttcagttcagcatttttataacccatactattttgtattctcgcatctctgatcagactgattcattattcatggaccaatgggccatctgctctgcagggtcagcataagcacagcaggttagcccattcgttctctataatctggcgtattctttcagttagtgggttaaacgcaatgatcaggtgaaaagggtgcaaattgatgagattacggtcacatttccgtgcaacccttttttatctgccatgtgtgcgttggagttttgctatttaagagcgaatagtacagtgattgtgctggttccttcattgttgaatcatctctcaacagcaatacgggcaactttcagagaaattcagacttgagcccaagagacaagggggacaagttctttttgcttcatttctaattcaccatcacgctttccacgacgttcgtttggttacttagttaatcctcaataattggggaggtgaaaccctttttggtttatgattaaaacctgtaggtaacaaggtgacaaacctggcatagtattccattggatttgtgaatcttgagagggttggtggtgatggcctatgctttgatgtatgaccgtactgatgcgtagtaccgttccttttgcatcatcatacatgtcaccagggaccatgaccaaatgcatgatccaccggttccatctccccaggttgatcggtctcatccaacatatattgcctctactttcatcttcatgttaagctaattttgttactactactgaaactatgcccccattgcctgcacaaaagtcagctcacagtgaagaaaacactactagcacatggaaataaagatgaaagatgccataatacatgtgtcctcagaccatttgacctcaaagttttcaatatgctagtatttgtttcatttaagttatgagggaggtgagggtttgtcccgttccggttttattctaccatattctttttttaatgtcagaacgagcggcatctgcgcacaaagtgtaagagctgaaatcgctacatttcctattattatattaaatattttagtataattttatagctcaagttctgaccttggaaaatttcctgaacccacaggattggagaggcagccatgtcaggatcagtggcggtattctgtctgtacccagatgacctgactccagtgactcgtgaaggtgaagagaagccgcacaagcaggtgatgatcttttcttttttttaattaggaacttaaaaagtctactccctccgtcaaaaaaaaaaagacaaaccctggtttctgtgttcaacgtttgactgttcgtcttatttgaaaagttatgaaaaaaattaaaaaaaataagtcacgcataaagtattaatcatgttttatcatctaacaacaacaatgaaaatactaattataaaaaaatttcatataagacagacagtcaaacgttggcacgggaacccacggtttgcctttttttttggacgtagggagtacgtattttccggttggatgtagcctttttaaattactccatccgtcctattttaagtggaaccatgagtttccgtatccaacttttatcgtttgttttatttgaaatttttttataattagtatttttattgttatgagatgttaaaatatgaatagtattttatgcacgacttatgtttctaaattttattaaaatttttttaaataaaacagacgatcaaagttgggcacgtaaaatcatgtttgcacttaaagtgggacggagagagtaggaacttagcctaactactagtccgtccccaaaaaaaaaggtaaaccctaactacgaatctggacacacatgacatgctgcatgtgtctagatttatagtcagtattgacatgctactcagttcattgcaaccaatttttgccctctcactccgactcgtccaacactctgtccgagagcgtcccattctcctccgtggttgcatggagacacatgcattttgcctcaacagttgttctcccatgttatgcagctcatcatctcatcgcatcctcctcctcgtcacccctcctgccccatcctcccaaccactcgtgactgcagctggatggcgacgccgtctaatccatctatcttcgtgcgccaaatgcatcatggcaccatcatcatggtatggcccctcctcccctgcatgcccaaaggatgaacggacccaccaaaagccctcataataattttaaaaaaaaattgatttactcgaagctaaaaagaagattgtgcggtcgagatctagattacttgtggataaatgggtgacggtactttctcgtctgattaggcttgcttattgtcggtaaggacgtagtagaatcatcgtttttcttttgataggatttcagggaagctaaagatttttctctagttttcatttctttaaacatgtgataagagatggaatacagaaaggtttgcacgttagtacgtgtgtatgtgtaatcgtaagagtaaaatcaaatcacatatagctaattaaaaagaggtgaaaaaggtagaatgacgctaaaaaaaagagagaagagaatgcggtcgagatcgggtttacttgtcgtgcataaatgggtgaaaagattgttttctcattttttttgtcattagtatattacaacacaggaatttcacgcgaatttaatttattattatatccaaggggtattttttcccacgtgattccggaaaaaaacatctccactcgcactcctgtacggtcgatcggacggtccacgtcgcgcgagttgatgatccaacggtcgtcatcgtctcaggcagacttaaaggcttcctcctccccaacctctgctccggcagttaccagttgagcagcctcgccgccgtctccgcctccgctattatgagttccactcctccaccaccgtaacctctactctactagccccacctcctcctcctcctcttcgccgccgccgcctccgcctccgccgccgcagatctcgccgcggtagcgggaatggtgagcgcgtcaagcctgctgctcccgtcgtccgtgcgggacttcgcctcctgcatcggcgacggagccgtccgcgtcgccgacgtcgcggcgtgcaccgcgccgtcctccacccgcgtctccacctgctcctcctcctcctccaccaccgcctcctcctcctccccgacgctctccgtcaccgtctcctaccgcgccaccctgctcgcggcccccgcgccgccgctgcagctccgcctcacgtggggacactccccgctcggccccacgctgtcgttcgcgccgtcgcccaccgcccgcgccatccagctccgacggaggaggggctcccgctccctcccctcgggctccagctccggcgacgagaacgggggtggtggtgatgagtccggtactaccacgccgcccccgcccccgccgctcgcgctgttctgggatctcaccgccgcgcggtacgaccccgcggcgtcgtcgccggagccggtgtccgggtactacgtggtggcggtggccagcgcggaggtggtgctcgcggtgggcgacctggcggcggagttcgtcaaggctaagttcgagggccagatcccgcgcgcccgcgtcgcgcccgtctcgcgcgtggagcgcgtcgtggtgtccgacccggcggcgatgcacgccgcgcgcgtccggttcgcggagggcgggcccgagcacgaggtcagcgtcagctgcgcgcccgccgcccccggctccggcggcggaggggacgagctgtgggtgtgcgtcgacggcaagcgcgcggtgcaggcgtgccggctgcgctggaacttccgggggaaccagacggtgttcgtcgacggcgcccccgtcgacgtgatgtgggacctccacgggtggtggttccgggagccgccgggctgcgcggtggtgatgctccgggcgaggagcgcgctcgagagccgcctatggctggaggaggaggccgccgcgccgggattctccctcatcgtgcaggcgttcaagtcgccaccctgacgaacgccatcttcttcttctccaagaggtcaaatctgttcactgctctggttactgtctgtctccattgggagaatttggtggtctcaattctttaccaaaccatcaaagcaaaagcaaaatgatgtgtggttgttgtttattgcaacttaggtgttagatttttcatgttggggagaaaaaaaacacaagatcatgaacagggcatatacattgatgagattggtgtgtgtgtagtgtaggatcctcttcttttatttcttcatcttttctgaataattgttagtttggtattgtgtccgtacagttaacaaacaacaacagaaagcaatttagagtgtgttttaattctgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0150200, RefSeq:Os11g0150200