Os11g0153800

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Revision as of 09:01, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0153800| Description = Similar to Ribosomal protein S25 (40S ribosomal 25S subunit)| Version = NM_001072314.1 GI:115484240 GeneID:4349810| ...")
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Gene Name

Os11g0153800

Description

Similar to Ribosomal protein S25 (40S ribosomal 25S subunit)

Version

NM_001072314.1 GI:115484240 GeneID:4349810

Length

5921 bp

Definition

Oryza sativa Japonica Group Os11g0153800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:2505405..2511325

Sequence Coding Region

2505484..2505486,2505582..2505656,2505764..2505898,2511014..2511127

Expression

GEO Profiles:Os11g0153800

Genome Context

<gbrowseImage1> name=NC_008404:2505405..2511325 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:2505405..2511325 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgccgaagaaggacaaggccccgccgccgtcctcgaagccggccaagtccggcggaggcaagcagaagaagaagaagtggagcaaggggaagcagaaggagaaggtgaacaactcggtgctgttcgacaaggccacctacgacaagcttctctccgaggtgcccaagtacaagcagatcaccccctccgtcctctccgagaggctcaggatcaatgggtcgctcgctcgacaggccatcaaggatcttgagtcaagaggcgccatcagggtggtgtctgtacattcgagccagctaatctacaccagagccaccaacgcttga</cdnaseq>

Protein Sequence

<aaseq>MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNSVLFD KATYDKLLSEVPKYKQITPSVLSERLRINGSLARQAIKDLESRGAIRVVSVHSSQLIY TRATNA</aaseq>

Gene Sequence

<dnaseqindica>80..82#178..252#360..494#5610..5723#acccaaacgcctcaccacctgtttgccgccgccgccaccgccacttcgccggaaccctaaaccagcccggcctcctcccatggtgagaatcaacatttcctccacctcacctatgaagatttcgccatattggttagtaatgggtgcttgtttttttctctgtgatgtgatgtgcaggcgccgaagaaggacaaggccccgccgccgtcctcgaagccggccaagtccggcggaggcaagcagaagaagaaggtcatccagatcccctgtgaattactgcttgtttcgattcgtctcaaacgctcacttgttttgtcctttttggatctgtgtgttggggatgtggtgcgtaattgcagaagtggagcaaggggaagcagaaggagaaggtgaacaactcggtgctgttcgacaaggccacctacgacaagcttctctccgaggtgcccaagtacaagcagatcaccccctccgtcctctccgagaggctcagggtatgtatcccccctttgtcttcctctccatgattctgtagcagtatctgtaacaatttggaatcgagtcattggaagttcgtaaaccatgttgtctctgaattgcttcacaggctcacaatgcgatgattatattccttcttttttttccttttagaaggggttaattggatttatgctattaagaatttgcctgttttgaaaaaaaaaatgtcattacaattcgtctagttggaacgatgccattaaaatcagaaatacaattaggacaatatctcatccttcacccttagaatgggatagtgtaatgagacaatctctgtctctcatatatcaccttttcacacaccctttcctcatagccctgtcgtctacatgagccccaatgtcacatcgtgcacctttatcgcatgcggtggagtcacatgccccatcttgtgccagaacagcatggcatgcagtagtatgactaatagtactagtcccatgcagtagtactactactaagtcactctcactcaccctacacgaggactactagtgtgtatttccttcatcccaaaatgaaaaaatctagtacattatgtgtttgacatatcctgtactagatttgtttattttgggacggagggagtatccagtagtagtagcagcaactgtttgaatcatgaaaaaagtgaaattaatgtcatgacataaaggataagatagtaaaaaataattgctatctttgtttcgattagttttctattacattagagttccaacaatcacaggtatagcaactactatatgatattcatatacttgtaggtatcagttccggtactcaactataaagtttggtacctacgagaaaattggcattttgtgattgtcaaaagtgggtatcgttggaatttcattccacaaattggtttcgctaaaataccactatcaaacgggggcaatacactagaatgctatttcttcttaattgaatgaggtgtgccttgtttttcttgacgacctgacccaaatacccctctggattcttttcctatctcctctctctctctctctctctctctctctctctgacttgttcactttttagccatcatcaacgaaccgccggcacccttcttccttgttgttcctctccgtgcttccatcccaacacatggctaacgattgacgaaacagtgtgcaaatccaagccgtgcaaaggatttgcttgaggttggaggtgactaggaggccacatgagaaggagtttgatgctagaggtgacgaggagaaagaacacaatgacgacgatgactgtgagcatcgtgtctcatcaatgtgggtgtggcttctatgatggccccgccgccatgaagcctagaattgtcctcgtgacgttgctcacttgctatggcttcgccaatggcgactgctataggctcctctttgctcgtgtcgctcactcccacaactctccggcctccctctccatctccatcgcaagccatgtcttggtcatgaagcctcatccctagccaatccgcttggccaccatcggttctctcagcgccgctcacgaccatcggtgtctaatccttccacaaccactcattgtgccgtctaaggaggaatccaatatttggtacgtgagggaggagacgtaatgaggacatcactaacttggatatgatcatggctacattatttattcatcaaccaaaggtgcatgttttctatgttttctatgtaagatttacgtgttacaacgaatctggacaggcttatgtccagatttgttgtatgtgtcatatcccaccaaaatcccttatatttagggatggagggagtttatatttgaacaaacattattgcaccatgagttttgtgtcttcccgtttgtaaaaatatttgcgtaggtaaaggagagtgggctcactaagtgcttggataatcgaagttgattggggaccaaactaagatcttacccaagtctactactacatcacaacatcacttttggtccatagaaagcaagagatgaagttctgcatgttttggatttggatttgggcttcctgtcagtatcaacttcaaataaacctagtcgtttatccaaaaagattcctgaggcccatgagtacttgttggaaagcttatggagtttactttgatatggttctggtcccatgtcgaaattccttccgaactgtcgggaatctgtaaaacaaaccacataccttatccagtccaagtctgatttgggtcttggaccttgtaattgtgtcgtgggctaagcccaagggggtggtgcaggttttgcttagattatttcatagttcggtttgtagaataccatcttcgagttcttgattaatcactcatctgcaattgatggcaacaggatgctcgatcttccatcaggtaaagataactcttgatttggcgaaaacttgtcacacatgatttgactttcgatcaacacgatctaaacttgcaatttcagcaccatgtcttttctagttaccaaccgtgccgaaatctgattggccttcactgagaaggctaatccttgcatgcgaatcgaagaatacaagcaagaaaaaggtagattgtagctcaattgcagatgaatgatttagcactcgaagttggggttctacaaaccgaactagtggtgaaattgcaatggtagaaataatctaaccgaaacttgactctaaactatggcgactactcaacaaatatgattaaggacgtcctaagattagccctagggcgccacctccttgggtttagcccacgacacaattacaagtttcaaggcccaaatcaaactcgggctggatgaggcacgtggcttgttttgcagattcccgatagcttagtaggaattttgacgtgggaccaaaaaccatctaaaagtaggctctataagctttccaataagtactcgagccccaagattccttctagatcagtggctaggttcgtttgaagttgatgtcatatgtcccgaatctaaatccaaaacgtgcagaactttatctcttgccttctaaggatcagaagtgacgtggtgatgtagaggtagacttgggggaagatctcggtttggtcttcaatcaacttctttgatcatcaagtacttcgtgagcccgctcttctttacttcacccacacaggtaattttttggaaatgagaatatacaaaacgcatggtgcagtaacgtttgttcaaacatataatgtgtaaatctaatacagaacatatgcacctttagcttgatgtgtaacataagcatagctatatccgagccaatgatgtcctcaccaagacgaagataatgacgagatttgaggtggatgcaccctagtcacttcgtcttcatctcgctcatcgccgatcccatcgaggtccacacagcaaaggccaccatgagctcatgcaccgctttcctcgtcaggctagcagcggtagcggtgtgctgtggtgctaacgcggcagatgtgcaggtggtgagctgacccaaggtggatctatccccttctcgtctcttctgttcctcaataggagagcccaagggcatttatgtccatttgctatgtaaaaaaaatgcaaaaactgaccaaaagggaagaaaaaacattctagcgtgttgcctatatttgagagtggtattttatcgaaacccatttgcgggatggcattccagtgtaacccacttttgacaatgacatctcggtacctacaggaatcagagttggtacgtgccagacttgatacctgtatattaggtttgatgcttatgcataccagattatcgtcattaagaccctaacatggtgtatatattttagtattgactataacttaatgtgacattcatatatcatctaggtaatacactatccaaacaaacaactttggggatgaatgtggacaaatatttgtctatattcatccctcaaaagttgattcttttttaaagaggacagaaatttcttgagacaaataatattttgttgggtttatcatcaattgatgaagtctatcgctttgggttttggttttgttgggatggatgcaaggtgttgagtttggatccgacgacaggcggtagcggggcttgggaacgacgcttggggatcgagagggatgggaggaagagtggagaggatagaggtagaagataaggggcaatttagtccaaaataaaatctcagtgcatccaaggggtatgtagtggcatatctccgatttcaacagaattataatggcatcattccaattagacattgtaatagcattttttgaaatgggcaaatttatgatggcatggatccaattatccattttaggagctcagtggtagactttgttaggaatgtatggtggatcttggcagtttcgttgttcagatgtgtaggttaatagtattattgtagtacaactggcaactagtataccaacactatattgtttagaggttggcatatttgtcctgcaagatatcatgacctgtgctatatcagaattcacatgatcataggtaagtgagtttatttgcagaatcaattggtattttttttgtaaatttgacagtggaactgatctaagtgataaaaatgtctaatcagatagcaggaaaaacacttaaaccctcttctttgtattagaaactacaagatagtataggacatttgattctttttcactcttaaatttcgtaatataataggatgccagcgcatatagcgtgttgtttgaagcgaaagtggcatattgttttttttatgtgatctacattcttacattattttttatttacttcacagcaatcttttacacctgttgcatctttcttttcttgtggattacttctacctgaaattgatgtacactgctctgtactttacgttccacggctttcttcctcggatcatctttttgctctttcatgactgcaaaatgagaataaagctgttgttaaaattgtttgattagacaattaagtttaaaagttgtcatgctacttcttcaatttgacgtagtttgtttatcagtagaataaactgctattcagatgtgtcattgacagtattaattgaaattgaatgttttgccagatcaatgggtcgctcgctcgacaggccatcaaggatcttgagtcaagaggcgccatcagggtggtgtctgtacattcgagccagctaatctacaccagagccaccaacgcttgaggcataagctttcactaaaaaaaaagcttgggacataatcagtctagactcgcaaccaaaaaaatcgtattgtacgatctttgttgatcttgagatcctgaagaaaaaaaattgggagttctgattcccatgacaattgcaacatgaaattgcttatcttcactgaaattcaatgttcaacaagctggctattttatt</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0153800, RefSeq:Os11g0153800