Os11g0159000

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Revision as of 09:01, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0159000| Description = Conserved hypothetical protein| Version = NM_001072343.1 GI:115484298 GeneID:4349840| Length = 8123 bp| Definition ...")
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Gene Name

Os11g0159000

Description

Conserved hypothetical protein

Version

NM_001072343.1 GI:115484298 GeneID:4349840

Length

8123 bp

Definition

Oryza sativa Japonica Group Os11g0159000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:2844039..2852161

Sequence Coding Region

2846889..2846902,2849878..2849938,2850008..2850185,2850287..2850689,2851872..2851974

Expression

GEO Profiles:Os11g0159000

Genome Context

<gbrowseImage1> name=NC_008404:2844039..2852161 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:2844039..2852161 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcggagggcgatgatgggcgtggacgatctgatcgaggaggcgaaggtgcgcaccgtgtggtgggcgctctgcgtcttcgccatctcctacttcctcacgcatacgagtaaatcaatgtggacaaatgtgcccatgtcaattcttatacttgcgtttctccgatacctttcattcaaagtggaattccattggagaggccagcctgttcagaagcagacacatttgtctcaattgtcaaaacgacagttgtctgctcatgatcatcggctttcaactgtggcaccggtttcaagatggagaaggaaagttggttcaccttctgttgaggctgcttttgaaagtttcattgagaatattttgagagactttgtggtggacttgtggtattcatctattactcctgatagagaggccccagagttgatacgtggtctaatacttcatgctcttggagaaatatcaggcagggtgaaggaaatgaatctagttgacttgctaacaagggatatggctgatttgataggacaccatttagatattttccggaaaaatcaatctcaaattggtgttgatgttatgggaacattgtcatctgaggaaagagatgagagactgaagcagcacctaatagtttcacaggaactccatcccgcattgttatcttcagagcatgaatataaggtttttcaagatattgttgggggtataatggctctagttttaagaccgcaagatgctcagatatggttcaaatga</cdnaseq>

Protein Sequence

<aaseq>MRRAMMGVDDLIEEAKVRTVWWALCVFAISYFLTHTSKSMWTNV PMSILILAFLRYLSFKVEFHWRGQPVQKQTHLSQLSKRQLSAHDHRLSTVAPVSRWRR KVGSPSVEAAFESFIENILRDFVVDLWYSSITPDREAPELIRGLILHALGEISGRVKE MNLVDLLTRDMADLIGHHLDIFRKNQSQIGVDVMGTLSSEERDERLKQHLIVSQELHP ALLSSEHEYKVFQDIVGGIMALVLRPQDAQIWFK</aaseq>

Gene Sequence

<dnaseqindica>5260..5273#2224..2284#1977..2154#1473..1875#188..290#acgcccagagaactcgtcgcgccgccgccatcctccatctccggcgacggcggcgctcggacggcgagagggttaggattcgccgaagtgggcggaggaaacccccccccctccacggggaacccgccgccacgacgcccgtcaccccccggcgcgcgcgaggcacgcgagcggaaggaaggacgagatgcggagggcgatgatgggcgtggacgatctgatcgaggaggcgaaggtgcgcaccgtgtggtgggcgctctgcgtcttcgccatctcctacttcctcacgcgtaagcatgccccttctctctctccctctccctccatttgcgacctagaaatttccgcttcccgcaaccgccttgacatcatggttagattgcgtaattgggatgaagtgccctgtcgtttgatgacttatcggtggaacatgcattagattcatttcccctaggatttttttgttaactgctgcttgcagatgtgggaattggtgaggaaattttgattggctgcaaagttggccgcgacaagttggtaatcgagtagctagagcttgtaattatcccatctgggggttcatgggtgcatccgattgcaaggagtcctgatggatgttacgtgggagttttggggctgttcatttcttcttgcgtttgatccagttactgcttctagtggtggtggagttggtctatggagtttatttgtaagggaacttgtttcgttggcctggcacaaaatgcctaataaaaaaaagtccttcgagtttcatgtatgctgctgaattctagcaagttttcgtgatataatcttgaaatgccctagatggaagtagtgaatgggcacgggaacaaacagaaagcaccttttgttctgcttcatcgtttaatgtaacgtaataccttctttgttggctacctgagttacttcatactggagatcaacttctaactttactaggcattttggaccttgatgatgtatattgtaagttgaggacgagggatcctacctattgaagtaattcgatgaactagctctaggaaaattataggccttcttggtgttgactaaagatactgccacttttgttgtaaaacaattcactggcccaatttttagtggaaaaactagcttcaaataaacaaagttcaatttgcaggattggaaaaggaaagaaaaattggtctatgttgaatcacacacaattttattaatttattttgaagctaaccatgaataagtcttgcaagacttcaactgcaaacctgcaacacttcttttgctttcaaaataactctttctttgcttcctgtttcttttccttcatgcattctcatgttatatgttgacaaccaagatgcattgaaaactttttatgctgtgcagctgttgatttgatatccatactatcttcagttaaaatcaacaatcttgctaacattcctcttcatctttgtttgaaacagatacgagtaaatcaatgtggacaaatgtgcccatgtcaattcttatacttgcgtttctccgatacctttcattcaaagtggaattccattggagaggccagcctgttcagaagcagacacatttgtctcaattgtcaaaacgacagttgtctgctcatgatcatcggctttcaactgtggcaccggtttcaagatggagaaggaaagttggttcaccttctgttgaggctgcttttgaaagtttcattgagaatattttgagagactttgtggtggacttgtggtattcatctattactcctgatagagaggccccagagttgatacgtggtctaatacttcatgctcttggagaaatatcaggcagggtgaaggaaatgaatctagttgacttgctaacaaggtgactgggattgatattctaactactatctaccgttcctcatttataattttctcttttaaaggttaagagttggagcctttttctcttttctttttcagggatatggctgatttgataggacaccatttagatattttccggaaaaatcaatctcaaattggtgttgatgttatgggaacattgtcatctgaggaaagagatgagagactgaagcagcacctaatagtttcacaggaactccatcccgcattgttatcttcagagcatgaatataaggtaagggctataatttctatctttgagtaacccacttatacagcaacaattaatcaacatgagttgtaggtttttcaagatattgttgggggtataatggctctagttttaagaccgcaagatgctcagagtccattggttcgctgtttctccagggaactgctgacctgcttagtcctgcagccagtgatgaactttgcaagtcctatgtaagctctggcacttcatattatttttttgagttctaattaaagtttcttctttctaaacaattccggttactttggaagtttttatcctggtatatttagatgaagaaatcaatagaatgtatccgtaagttctacctagttatttttatctctttttcataataataaaaagcagcggcatgtaaagtctgtacatttaagaagttgtttaaagtgtggagttgcatctcagaccggtattatcagttggtcaactggggaaattaaccagtttcaatgttttcttttcctgtatctaaacctattccaatttcttttctttttcagctacatgaatgagctaattatttaccttatgaacaacaaaaatacaaacagtggaggagggaatttagataactctaattcttcagttacagtaacaaatgcccattcagctcataaaggaagttcacagggttgtcaagtggaatcaaggaatttgtctcaagaatccagtggcttagtaccagcaaatagttctgggatgaggtcacttgttactcatgatggtgacaagtcaaaaatgtcaaagattgaacatggtagcgccatccagtctcgacagccagattgggctgtgggactggatgcagctactaaaaggcgatctcaggttcttgctcctgagaatcttgagaacatgtgggcaattggaagaaattaccaaaagaaaatggtgaaattcgagcattcaaggggaaaaagttcaggcatagataacattccaagtgcaggagcagcaggaaaagagttatctcctaatttcaatgagagaattacatctgttgatgacaaatacatggtcaatttgatgcaaggttcaaataggaatgcccaatctacctatgtcacaggtagtcacccacttgtttcgcaagaatggcaagatacggatgaagcaaaaccaaatgaagggagtcaagttgattgcagcagcacagaaaaaccctgtgaaactatcaacaacacaaaagctcagttaaagaggtctaatagtactcctgatattgaaaaaagatatctagccaaaagtaatcaaaccatggtttccagtgaaatagcaagaaaaaatcagggtgatagaggttcttttcctgtctcacatggtgaagtagtattgtatgttccaaagataaggtgccgggtaagtttgttgatcctatcactggcactcttttaaatatcctttttattcatagttgtctgattaataggctttatgaataaataaatttatcccatccaacagtattctgtaataagtttccttcaaaaaaaattgtgtaataagtactcaccaaatgactacagtagctaattccatgtggaatgcagttatcaatagttataatagtaggaacaatatctattagagaatgagcctcttttttactatgccgagtttacccaagggatatcctcactggaaacttacttggggatttcataaagcttaattttggaggcagtttgggcagcagcaacttaaaaagtagcaaggtgctagggagggcaactattttggccttctgggcggattgatatctaactgctggcctgcctttgggggagccagtactctataaggacacaataacctgcccaaccaacacaagcagacagcacagatgtgcgggattctgtgcagtatagttgtgcgccaagttacatgtaaagataattttagcatttaattcggtgcatatgcaagtgttatatatttttatgcaatatgcaaatgtttctgagaagttatatccttctccataagtgtatgttgctcaagttttggtttcaaattttttgcaggttgttggtgcatattttgagaaacttagttcaaaatcctttgccgtttattctattgcggtgactgatgcagagaacaaggcttggtttgtgaaaagaaggtatgcctttaccagcacatagactttaatagctttcaaagagtaaagtacctatggttataacatatggcatggacttcaacttttactgtagataccgaaactttgaacgtcttcatcgacaactgaaggagattcctaattactctttgcacttgcctccaaagagttttctttcatctagtattgatgattaccttgtgcaccagcgatgcattttgctggacaaatatcttcaagtatgctttgaccctttaccatttgtctacatcttttgcctttaatatggtgacactaatcacttgtgtttcataggaactcttgtctatacctaatatagcagagcagcatgaagtttgggattttctgagtgcaacctcaaaggtgtgtagtttgaagccaagcaaatcaccataaaccttctacctagaaacaaaagaataaatatgtcatttttttagacctttctggtgttatttataacttttattctattttccgccttgtagaattactctgctggaaagtctacttctgttatgaaaaccttggctggtaggatccttgttctttctcttttgtttatgctgacaattatgaacgtgcctataaaatattttcctcactcacgatacttgtttgcccttgcaccaacagttaatgttgatgatgcgatggatgatattgttcgacagtttaaaggagtttcagatggtctgaaaagggctgttggaacctcacctaccagtgcaccttcttcacatttggcagagaatcagatgtctctatcttggaatcaggaagagatagataaccataatctgcataatagaaacctgtcaggtgctcatagtctttctgatggtgatagcaattatgaagatccctcctcatctgtaaatagtgctagccactcagacaatgagttgaacaacagtcagtatggttcaaatgatatcaagctcaatgaagcatattctggttttgatgcacaagcaagccaacaaatagagaaacctactagggcatattctgattcttcaaacatgtcttctctaaatacatttgaagatccagcaggaattcctcctgaggtacatgttgctagtatgcagggaacttctgttctgaagttctttttttccgtttgccctaaattttttattttatttcgcagtggacgccaacaaatgttagtgttcatttgttgaatctggttgacaaggtgttccaactaaagcggcgtggttggataaggtttgcctcccctttttcatgaactttctccaatttgttctttcataggatttacctgctagttctggactgtttcgacatagcaatgaggggactaaatgacagactgtagacaccactcaaagccaggcattggcggtatgaggtcaggattagaacctaactgctggaggggcactccagaatggctatggcccagaatgatcagctgtactagacaccaagagttgagcggagctgagtgacctgcttgggccaggttctagatatcatgaattcatgacagttctaaatatattttgtgaatatatttattaagataatttgcatgatctgttatcagacttgactctaggaggggagtaagtgtaagtatgctactgtttatgcaggggtggtttagattttgcagagattaaccaacatccttgcaatgtggatgtattttcactatccattatttgaatctaaaacacttgcaattttatatggcaaaacttgatttattttatgtacctgcagaaaacaagtactctggatatcaaagcagattttacagttagtcatggaagatgcaattgatgaatggattttaagacagatcaattggctccgaagagatgaagttattgtacaaggaatacgctggattcaagatgtaatgatacactatcttttctaactgaatttatctaaattttaataattcaaccactagttaaactaatattttcttgtgatgccttgacattctctgcaagttcctgctgcagcaaaccatgtgcaagttgtgtgccccatcaccacctcaatacatactcacacccctacacacgcacctttttactacttctgcacgctctatgatacaaatgtagtttattggtgtatagaatcatcaaaggaatatcataaatatcagcaaattattcttttgaggtatatggtctgatacaaataatccatcaatttactctgaaagtgaattatttctcttcaggatcaagaccaaccagaactaatttcaaagctagatgttgttgttttagccaatgtagaactcttttctccttttttttgcacataataaaatttccattctgcagactctctggcccaatggtgttttcttcaccaggttggatggatatcaaggaaatgcaggtccaagccaatttgataagcacccatctgggagtgctaatcaggctagtggcaacagaaaggatagtgcaagctcttttgaacaacaactggaggcatctagaaatgctagtgaagttaagaaacttcttctaggtgagtaactgaatatatcagctagtatgttttggccccatttcttttttagtctttgtatttacgagtttatccagacaacgttaggcgtatatctacagacttttatgatgtctcaggggagacagatacacaaaatcttgattatgtgaattgtaaatctgacacttggcaaaacctccagtgcacttatttacagcgtcactcctatatctattccttctactatgttatttatacagaatagaatgttccattttcgtttctacttccacagttccaatacacagttatctcagtttaagtcctgtttacaggagtatgattgaaagcaccattctctttagtatgcatgtgcaactttcaataaggaacaccaacttgactttcaataaggaacaccaacttggttctgtccagatgcatgccaactgctatgtaactccaactaacttgattttctatgccccttttaggtggaactccgccgacattagtcagcataatagggtacaagcagtaccagcgtagtgcgagggacatttactacttcctccaagtaagtaaatctaaaaccctagtagcatataagggcactctgataagacatcatctgatttacatgagacctgatgctgtgctgcagtccaatgtctgtgtgaagcagcttgcttatgcaatgatagagcaggtgcttgtgtcgctcttcccagagcttcgtcagctaatagaggacatacatgagaaaggtcgtaaggagcaagcgtcattcacttaccaactttgactgaaaagacgtcttgatccttcaaaaacctggtactgcacaaatggcctttgcttgtttcttcttttactctggcattttgcccatggcgaagctgcctggcacgcaaaaattttgcagatggatttcaacagcgtaaagttggattgaggatgcagttgttgattatccaaccaaaactatgtacagatgtatatcagaagctgtgtaaattagtcctctaatgcataccaagaactacgttcttacagtgatctctgatagtttgatgtatcgtatcattctttaattctttttctctcctcaatgtattctagtcgttcctagctctcttggctgaggtttgtaaaaatatcgaatgttccaattgtataggcgtaccgtatatctgactgtccattcttcagttgaagaactcaatccatgcatcttgacaagatagcaatcaagaacctttgactg</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0159000, RefSeq:Os11g0159000