Os11g0160000

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Revision as of 09:01, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0160000| Description = Protein of unknown function DUF241, plant family protein| Version = NM_001189434.1 GI:297727998 GeneID:9271401| Leng...")
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Gene Name

Os11g0160000

Description

Protein of unknown function DUF241, plant family protein

Version

NM_001189434.1 GI:297727998 GeneID:9271401

Length

7399 bp

Definition

Oryza sativa Japonica Group Os11g0160000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:2884796..2892194

Sequence Coding Region

2884796..2885317,2885952..2886037,2888233..2889022,2890646..2890688,2891114..2891844
,2892177..2892194

Expression

GEO Profiles:Os11g0160000

Genome Context

<gbrowseImage1> name=NC_008404:2884796..2892194 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:2884796..2892194 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggatcaacgagatcggcggcggcggcggcatgcgcttggtgtcgctggcgtacgccgtgctctccctctacctcctcctatggcgcgtacctggcgaccagccgctaacctgggtcaccgacttctcgctcctcgcctgcacctacatgtacttctggatcatctccctgtcagagaccatcaccaaggtcgccaccttcaccggcatcacatgcggcatcctactgtccttcgccgccgcgcaactcctcggcccggtcaccggcatggccgtcatggtcctcggcatgctctgcgccgccggggtcctcggccacgccgtcgccgagcaccgccaccgcatcggcagcgaggaggccgcatccgccctggccacatggacgctaaccgaggagcagacggagctcgaggaagggccctacgccttccacgccggcgtcctcgtcgccgcctactcgctcttcctcctggctgtcatggcgtggctcgccgtcgaccagcgcggcggcgtcgacacggtggatacttgcaatgctcttgcgtattcggctctacacatgcttgctgttgcgttcctcatcatctttgtcagcacaattgttggtgccatccatgaaggttgggcaccagcaaagtactacatctgttcttccttctctcttcaatctcaaacaagaatcatcataccattcactagaaacatggcttgccatcaaagatcttcaagtcttccttcagggcctcactcaactgtggccaaagttgaagaagaactccagggtctaaaagcacacatctcttcgccttccgtgaccgtcgccgcaatatgtgatggcttgaggaagcttggagatgtgtacaacagcatagaggggatcatgtgcttgcccagcaaccaagttggcctctccttgccccagcagaagcaaatggttgaggaagagcttgacaggtcccttgttctgattgatctgtgcaactccatgcaagagaacttatcagagctgaagatgagcatcctggaattgcagctggtcctcaagagaggagatcatgcagctattcagctcaagtttgagtcttttgttcgtatagcgaggaaggcgcaaaagcctttcaagaagacaggcagcaaggcaactgctgaatgttgcaatttggttaggataatggctgaagccagagagatggctgtctctttgcttgataccacatcaggcctcttggtgaagaagattggtgcacccagttcaagcaaatggtctcttgtctccaagaggttccagaaaaaaaatgttgtttgtgatgaggaacagttgcaagcactagagcgtgaaattggagatcttgagaatggagctgagttcctcttcaggagattgatccagaccagggagagacatgctaacagtgagctgcataaagatctagatgcagaagaacacatcttggcatccaacatcacaagcatggcttcccatcaaaggtctgcaagtctgccatccaggcttcactccactgaatccaatgtggaagaagagcttcatggcttgagatcatgcatctcttcaccttccgcgacaatcggcacgatgtgcgatggtctgaggaggctcggagaggtctacaacagcatagaggagatcatgttcttgcccagcaaccaagctggcatctccttgcaccagcagaggaagatggtggaggaagaacttgacatgtccctcctgctgattgatctctgcaatgccatgcaagagagcttatcagagatgaagatgagcatccatgagctgcagctactcctcaagagaggagattctgtggcagttcacaacaagatcgagtcttttgtccggctcgcgaagaaggcgcagaagatgccattcaagaagacaagcattggagccatctcagagagttgcaagatgatcaggctactgggagaagccagagagatggctgtctctgtgcttgaatccacatctcttctgttgccaaagcagattgccaagaacagtgcaagcaaatggtctctggtgtccaagaggtttcagagaaggaatgttgttgtgtgtgaggagcagcagttgcaagaactggagcatagcatgggggatcttgaggatggtgctgagttcttgttcaggagattgatccagatcaggaattcagatgctcattga</cdnaseq>

Protein Sequence

<aaseq>MRINEIGGGGGMRLVSLAYAVLSLYLLLWRVPGDQPLTWVTDFS LLACTYMYFWIISLSETITKVATFTGITCGILLSFAAAQLLGPVTGMAVMVLGMLCAA GVLGHAVAEHRHRIGSEEAASALATWTLTEEQTELEEGPYAFHAGVLVAAYSLFLLAV MAWLAVDQRGGVDTVDTCNALAYSALHMLAVAFLIIFVSTIVGAIHEGWAPAKYYICS SFSLQSQTRIIIPFTRNMACHQRSSSLPSGPHSTVAKVEEELQGLKAHISSPSVTVAA ICDGLRKLGDVYNSIEGIMCLPSNQVGLSLPQQKQMVEEELDRSLVLIDLCNSMQENL SELKMSILELQLVLKRGDHAAIQLKFESFVRIARKAQKPFKKTGSKATAECCNLVRIM AEAREMAVSLLDTTSGLLVKKIGAPSSSKWSLVSKRFQKKNVVCDEEQLQALEREIGD LENGAEFLFRRLIQTRERHANSELHKDLDAEEHILASNITSMASHQRSASLPSRLHST ESNVEEELHGLRSCISSPSATIGTMCDGLRRLGEVYNSIEEIMFLPSNQAGISLHQQR KMVEEELDMSLLLIDLCNAMQESLSEMKMSIHELQLLLKRGDSVAVHNKIESFVRLAK KAQKMPFKKTSIGAISESCKMIRLLGEAREMAVSVLESTSLLLPKQIAKNSASKWSLV SKRFQRRNVVVCEEQQLQELEHSMGDLEDGAEFLFRRLIQIRNSDAH</aaseq>

Gene Sequence

<dnaseqindica>1..522#1157..1242#3438..4227#5851..5893#6319..7049#7382..7399#atgaggatcaacgagatcggcggcggcggcggcatgcgcttggtgtcgctggcgtacgccgtgctctccctctacctcctcctatggcgcgtacctggcgaccagccgctaacctgggtcaccgacttctcgctcctcgcctgcacctacatgtacttctggatcatctccctgtcagagaccatcaccaaggtcgccaccttcaccggcatcacatgcggcatcctactgtccttcgccgccgcgcaactcctcggcccggtcaccggcatggccgtcatggtcctcggcatgctctgcgccgccggggtcctcggccacgccgtcgccgagcaccgccaccgcatcggcagcgaggaggccgcatccgccctggccacatggacgctaaccgaggagcagacggagctcgaggaagggccctacgccttccacgccggcgtcctcgtcgccgcctactcgctcttcctcctggctgtcatggcgtggctcgccgtcgaccagcgcggcggcgtcgacacggtcaccgtggccaccatggtgtttgaggtcttgctcgtgagaaacgcttaggggttttccggctagctctccacaagatggtgggctagacgacctgggtttaaagcctcaccccctttaattatttaagagtaaatttcacaaaactacacgttttgtagtccaaattgcagaaaaccacacactttgacatttggcacttaagtacatatattttagtagtctagtttcagaaaaccacactatcaatgaatggattcacctgcgagatgacatgactgtttcacctagaatgaggacatgacatcctcatccttgatgccacgtcctcatccttgatggaacaaccacgttatctcatgggtgaatccattcatcgataatgtggttttgtgaaactaaactatcaaaatatatgtacttaagtgccaagtgtcaaaatatctgtaattttctataacttgaaccataaaacatgtagttttgtgaaatttactctttatttaatcatattaggtcatactctaatattggcgtctttttttttaaggtgtcgctcgtggttgtgttcgtctccttcatctggaccggcttcgtgtccgtcttcctgctccatgaggccctcctctcgcaggtggatacttgcaatgctcttgcgtattcggctctacacatgcttgctgttgcgttcctcatcatctttgtcagcacaattgttgggttgctcgtgctattgttgggttgctcgtgatatgtttaaccgttcgtcttattcaaaaaaattaagtaattattaattcttttcctatcatttaattcattgttaaatatacttatatgtatacatatagttttatatatttcacaaaagtttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaatatttagaaacggagggagtaatatatatgtttctttgctcttacattgtcctttaaatcccctaattaaatgggaattaattaattagttattgcaactcgatctcaatccctaacgtgtattatattaattacttgtttttatcatctcctatataggcaagtttaacgtcgagaatccggagcaaatgatggttgatgtgacgaagctgaagtatgattggagttgtgatgtctaatggtctccttgtgatgaactggtgttaggatgctgatgtttagtgttttactttccaactggcttttgaaccggtgttagaatactgctatggctaattaattaactggaccttatgttattagtgtgtttaattaccttaagtttatgttattgaaatgtactgaaccatgttatcgtattggaaggtatgctttgagtacttgtgttaatgaagtaaggggataatcacttgtattgggtggatcaatatgaaattgtgttgcttccttctccatgttccaaggacaagcaccactcacaatgacaacctgccaccttcccctgatgatatataataactcaaaatgtaaggaaggaatgaaggatctgtcagattgggtaaatttgacaaggacaaggccaatttgcaataacaataatttttattatgaggtttctgcctttggatatttggatctgattttcttttcctgatgattttcttcttctgctttctgcctgacctgggttttattttatagtaaatatgatttgtgatattttcatggaatgaaatcgactcggacatcaagtaaaccttttatcattgataacaggatttggcatttttcattggaagatagagacaccataattgatcagcttgacaggtactctttcctactctgctaattgagatagtatgtagtttgtgagaatgatgatgccctgagtatgcaccatgctcaagaaaggtaggttattttattttcaggcaatgcataaatgcgttctgtgtagttttcttcaaattaaagagagtaatgatataacttgtaatgctcattaaggcctatgaaccttataattgcatttttttattatagttaaaaaaggtcgttcattaattcagtgtgaattgttcttgatgagaactgaaaaagcaccatagacataatttcctgtctcaatgttacacaaactagaaaagtttattcctcatactaattggcaatatattagcagataattagttcttccttttatggttcttatggttggattggtctgctctttagtacatcttgttctctttattctaatacgcatgcatttggtttttcctgaaatgattgaaacttaattgacagatgcttgtcctatactacactatgaatatgaagtactcgtgcagactccagatttacaacatgtggaacttgaggaagctatatgtttaattagaatttagcaacaattggctctctaaaataatcaaatgtggggatcatgttatatgcattcatgtctgaaatagtgatccaatgcttcatgatcattttaaatggataagcatttcttaggatcattctgcatgtagctgtctagcttaggcatgttaaacatgctatatgataactgcagagcatgtgcaatgatctgcttgagagaccagctggtcattcaacagacctcagatcaagaaattcagtgctcgttttcttattttatttcactagtagtttgctgatctgtattttgaactaagcacccgtgcagatacacgcacactgtcaccaatagttgagacatcgtatattctgaagctcaattattgatgtctactgcattggagtgatagagcatctgtttgtcttggaggcagacaaacttgctccatgattgcaagcaatggaggttggattagtagcttagataacttgtcaattccattgcataatttgcatttggttcttgactataaatacagtgccatccatgaaggttgggcaccagcaaagtactacatctgttcttccttctctcttcaatctcaaacaagaatcatcataccattcactagaaacatggcttgccatcaaagatcttcaagtcttccttcagggcctcactcaactgtggccaaagttgaagaagaactccagggtctaaaagcacacatctcttcgccttccgtgaccgtcgccgcaatatgtgatggcttgaggaagcttggagatgtgtacaacagcatagaggggatcatgtgcttgcccagcaaccaagttggcctctccttgccccagcagaagcaaatggttgaggaagagcttgacaggtcccttgttctgattgatctgtgcaactccatgcaagagaacttatcagagctgaagatgagcatcctggaattgcagctggtcctcaagagaggagatcatgcagctattcagctcaagtttgagtcttttgttcgtatagcgaggaaggcgcaaaagcctttcaagaagacaggcagcaaggcaactgctgaatgttgcaatttggttaggataatggctgaagccagagagatggctgtctctttgcttgataccacatcaggcctcttggtgaagaagattggtgcacccagttcaagcaaatggtctcttgtctccaagaggttccagaaaaaaaatgttgtttgtgatgaggaacagttgcaagcactagagcgtgaaattggagatcttgagaatggagctgagttcctcttcaggagattgatccagaccagggtctctctgctgaacatccttagctcctagactctcttgttgctctttggtgcttgtgattggcatctacattttagaggatctgtcaatcttctaagacattttatgttaggatagcacaccaattgtatatagtttgatcaaattaaagaaaaaaagttttgaccatgttcttgttgtcaaagtccctttgtgcatgctcccatgctcttattcctcttgctcattttgctgaatagtgtgtcaaatcattacagccttattctaaaagtggccaattattacttggtggtttgtatctgaattggtcttgatacctcacaattattaatatttcagttagctcatcatgtgtgtctaacaactggttatgaactaacttgttataaaatccatttagtagaaactcatcatacccaaattttgcacaggaaagaataacatattaatacatgtcgaacaacaagtcttaagagcatgttgccaacaattttgatccttgtaaatagagcagagacagtaatggtaacttatttggttcagcttatggtaaatttctgcaatgcacatgaagccatcttacagctgcgttaatgagttcctgtttcagatggtcaagaatactgatccttttgtgatggatcttgttgcaggaggataaaacatgccagcaaggaagcaacatgcaacatagatgttgagttcatactttattttgatggtatctgtacaaatacaagcattgagcacgtttctggaggttaagtcagctctttaatattgttcccttgggattcttgctccctcaaccttcagccaaaaaactaacttgaacaccagtgcagtcagtgctgtccataataattgaaaggtgacagattgacaattctaataataaatattgccaccatatgttaactattgagcaaccgtgcattgccagcatgtgaaacatgactttaggtcctatggtaaaatatatatatatttagaagcatattattacacatggtaccttcaaacatcatggtccaggatacattctgtattgtcatatattttattgttctgtttaattatgtcatgaattttgcttgacaggaaaaccatttgcatatgaatcttcagtggcatatttaactgtttaactccagaaaccaagaatcttcttctgagaatagacaaaaaaaatttaggtggttgttattcacagtgcaagttgttcttactgacaaaataaccagcattgtagttgtctttgtaactgtgttatctgacaaatagttcatgtgttcataattttttcctgaaacagatgacatgagctctatcttccagtaaagagaggaacatggattcaaagttacaccgatctcatgatctaatttcattttatattttcagtttagcccagtggcagacgcaagaatttttcagaccccgggcaaaccgaacaatgttgggtgtttattctgcgaaaacattcttatgataactacaaaagccaatcaggagatcgcccatggtttagccatcaactgaaatctggattcagaaaacaatcagatcatgatacgcacgagcggtgagtggtattggatgattggatcatgttgctggtaggagagacatgctaacagtgagctgcataaagatctagatgcaggtacaactacaagaagttgcaaccaaattgacagattgttacaagatgagagtcagctgctgcttcaacgaacatcacggtcagttgcatgactggttctccagatcttccggttgagctaagcactcgtgcagatgcttttgtcaccaacagctgagacatcacatggtcacatcaagctcacttgttgatgtctctgcactggaattaaagaacataactatgtcctggagacagatgattacaccgcgtttagcagaaaacttgcttcattgtcagttgacagcgaatgctagagcaatggtagctgagatgacattctcaatgccattccctctggttctcgagtataaatagagtgagctgcaaatggttgatcacaaaagaaagtgtcaagctcttctcttctcttccatttctgacagaagaacacatcttggcatccaacatcacaagcatggcttcccatcaaaggtctgcaagtctgccatccaggcttcactccactgaatccaatgtggaagaagagcttcatggcttgagatcatgcatctcttcaccttccgcgacaatcggcacgatgtgcgatggtctgaggaggctcggagaggtctacaacagcatagaggagatcatgttcttgcccagcaaccaagctggcatctccttgcaccagcagaggaagatggtggaggaagaacttgacatgtccctcctgctgattgatctctgcaatgccatgcaagagagcttatcagagatgaagatgagcatccatgagctgcagctactcctcaagagaggagattctgtggcagttcacaacaagatcgagtcttttgtccggctcgcgaagaaggcgcagaagatgccattcaagaagacaagcattggagccatctcagagagttgcaagatgatcaggctactgggagaagccagagagatggctgtctctgtgcttgaatccacatctcttctgttgccaaagcagattgccaagaacagtgcaagcaaatggtctctggtgtccaagaggtttcagagaaggaatgttgttgtgtgtgaggagcagcagttgcaagaactggagcatagcatgggggatcttgaggatggtgctgagttcttgttcaggagattgatccagatcagggtttctttactgaacattcttagctcatagatttctctcaagctttgtcttgtgattggcatatgcctttttaaaggattcgtcaatcttgtatataaattgatagtttctaaatgagaacaaatgtatatatcgatcaaggaaagacagttttgatcatattcatgttgttcatgatcctttatgcctgctccttatttctatgaaatgtttttatgactctgttatgtttatgtgcactttgtgcttttgtggtgaacacgataaagaaaatcttagtttgtaaaatctgagtcctttttttttttcttataattccattgggagttcagaattcagatgctcattga</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0160000, RefSeq:Os11g0160000