Os11g0167300

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Revision as of 09:01, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0167300| Description = Protein of unknown function DUF537 family protein| Version = NM_001072370.1 GI:115484352 GeneID:4349873| Length = 42...")
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Gene Name

Os11g0167300

Description

Protein of unknown function DUF537 family protein

Version

NM_001072370.1 GI:115484352 GeneID:4349873

Length

4233 bp

Definition

Oryza sativa Japonica Group Os11g0167300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:3233487..3237719

Sequence Coding Region

3233748..3234522,3235077..3236697,3237265..3237646

Expression

GEO Profiles:Os11g0167300

Genome Context

<gbrowseImage1> name=NC_008404:3233487..3237719 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:3233487..3237719 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgcgggctctcctcccgcgcggcagcattctactcgtccttcgaccgcgagtcccgtccacaccccaccgatgcttcgcgattggggcggcggcggcagttgacggcggcgagacgtggcgggggcaactccggcagggggagggggaggggaggagcagggcggtgaaggtgtcggtgtggtgggacttccagagctgccacctcccgcagggcgccaacccgtgccgcgtcgccacgcgcgtcacggcggcgctgcgggacgccggcatccgcggccccgtcgacatcaccgccttaggcgacgcctacatgctcccccgcgccgtccaggaggctctcgccgccaccggcgtcgccttctcgcacgtcccttccagtggaaagggcggtcccgaccaattgttcatggctgatctgacctattggattgctcagaatcctccaccggcccatttcttccttatatctggcaacaaaggccttgcaaacattctgcatcgcctccggatgagcaattataatgtactgcttgcctgccccagtgctgactctagtgtattgtgcagtgcagcaacgattatgtggccatgggatgctttagttaaagggttggatttctcaccaaaacattttaaccaaccacctgatggtatatccttttcttggtacggtcactataggggaccccttgatgacttgttcttgaactcagagtcagatgactctatggcagagtcagaggactccctggcagagtcaagggactccaaggcttttcaaccacataccaagtcagtgaaaccacctattttacccaaatctgtggccaatggggttaggcaagtactgtactcctttcctgaaggtatcagtcttccaaatcttcgagcagagcttagaaagaatcatgtgttcatggataaaggattatttggcttcaaaaacttctcttctcttctccaagccatgcctgatgttgtgaagtttatagatcctctaccaggtgaaagaaaccagcctgctgtggttggggtttccaagagatcaatggagcctgctgagcaaatttacaagggaaagagttctgctcaaagcagtggtgagttcaaacgcctcgttcagactcttaatgagaaaccaccatcatcacatgtcccatcttcttcatcagatattttatctgcggaccgcaagaaagttctagcagttgatgccccatcttcccaatctgacttgttatctaggaaccaagagaaagctccccctgttgatttgactacacaacctgaaacacctgcaagctgtatggaagctgatgtggagagtgttgctggagcttctgcctttacaggagagcaaattactgttgacaaaaaggggctatttgaaaggatttgtgtactatggaatgatacagagcctgttaagcctatgctttctccgtctcaagatgatacccattctaaaggctccaatgatttactaactcagtatgccaatagtaacgaacataacagtcttttgacaaggaccttgaagatcttttccacaactgacaattcagatggagacaatgttgacagcacttcagcaattagcagcagtttctcaaatatgactgccaatgaccattcggacaaattaaatgtcaaggagaatgtagggaatacgatcatccattctagtagatcagttgacacgagcaacgctgaacataaagttgggtttatagaaaaaagcaaaggaatatttagctgggctgcaaagtggtgggcgtctggaaaaccagacacagatgacaatttaagttcagtacatatcaatgatggaacaagggaagaatcagaaaaagaatctgcatttgtaaagacagctgctactgcaagtgaacagcaagtaggagttgaactgttcatgaaaccttacttctgggatgcactacagcaatatttgtctacccctcatggatcagatcttgtttcaaaagcaaagacaagggaggagttagcgcatggactacagaagcaaggccattggcctctaaaaagccttggtgggaaacaccaccaccaattagtagatttgcttatctcagaaaagcaatggatcaaagaatcttcatcacaaacgtctccttttcgacttgccctcccccagagaagagctcgttctccactactttcattttttacgaatggaaggccatcaggccagcgtaaacatgtcgatgacagaagcccaactctgtctagaacgtcggtccatgttttacctacaaaaaatgggaagggtcaggccagctgcaagagcaatgagaatcaaagtaagagtgatgactttttggagaaagagcttggtccagtatctgacagtggtaaaccatatcgacaaaatgataaagcagtccggcatcatcctcctacctgttcagatgatgaattttctgatgatgaaaatcatgaggtggtccaagaggctgggagagatgcagcacaaagttcactcttcaaaattattgattcgtggaacactagtaagactatttgttctagcaagaaacagcacggcattggtggtatagtggactgctctagaatcaacagaggtaatggtggtgacaattcgatcacagaaaatgcagaaaaggctacaagcttatcaaaacattcttatatgacctcagattcagattcagattcagatgaagagaagttattcaacagtgtcttgggcagtctgcagaatgcaaagaactcaagtttgcccggttga</cdnaseq>

Protein Sequence

<aaseq>MSRALLPRGSILLVLRPRVPSTPHRCFAIGAAAAVDGGETWRGQ LRQGEGEGRSRAVKVSVWWDFQSCHLPQGANPCRVATRVTAALRDAGIRGPVDITALG DAYMLPRAVQEALAATGVAFSHVPSSGKGGPDQLFMADLTYWIAQNPPPAHFFLISGN KGLANILHRLRMSNYNVLLACPSADSSVLCSAATIMWPWDALVKGLDFSPKHFNQPPD GISFSWYGHYRGPLDDLFLNSESDDSMAESEDSLAESRDSKAFQPHTKSVKPPILPKS VANGVRQVLYSFPEGISLPNLRAELRKNHVFMDKGLFGFKNFSSLLQAMPDVVKFIDP LPGERNQPAVVGVSKRSMEPAEQIYKGKSSAQSSGEFKRLVQTLNEKPPSSHVPSSSS DILSADRKKVLAVDAPSSQSDLLSRNQEKAPPVDLTTQPETPASCMEADVESVAGASA FTGEQITVDKKGLFERICVLWNDTEPVKPMLSPSQDDTHSKGSNDLLTQYANSNEHNS LLTRTLKIFSTTDNSDGDNVDSTSAISSSFSNMTANDHSDKLNVKENVGNTIIHSSRS VDTSNAEHKVGFIEKSKGIFSWAAKWWASGKPDTDDNLSSVHINDGTREESEKESAFV KTAATASEQQVGVELFMKPYFWDALQQYLSTPHGSDLVSKAKTREELAHGLQKQGHWP LKSLGGKHHHQLVDLLISEKQWIKESSSQTSPFRLALPQRRARSPLLSFFTNGRPSGQ RKHVDDRSPTLSRTSVHVLPTKNGKGQASCKSNENQSKSDDFLEKELGPVSDSGKPYR QNDKAVRHHPPTCSDDEFSDDENHEVVQEAGRDAAQSSLFKIIDSWNTSKTICSSKKQ HGIGGIVDCSRINRGNGGDNSITENAEKATSLSKHSYMTSDSDSDSDEEKLFNSVLGS LQNAKNSSLPG</aaseq>

Gene Sequence

<dnaseqindica>3198..3972#1023..2643#74..455#ccgtcgccgccaccgccaccgccttcccctcgatcgccggagcggcgagcccacggcggcgagcgccgcagccatgtcgcgggctctcctcccgcgcggcagcattctactcgtccttcgaccgcgagtcccgtccacaccccaccgatgcttcgcgattggggcggcggcggcagttgacggcggcgagacgtggcgggggcaactccggcagggggagggggaggggaggagcagggcggtgaaggtgtcggtgtggtgggacttccagagctgccacctcccgcagggcgccaacccgtgccgcgtcgccacgcgcgtcacggcggcgctgcgggacgccggcatccgcggccccgtcgacatcaccgccttaggcgacgcctacatgctcccccgcgccgtccaggaggctctcgccgccaccggcgtcgccttctcgcacgtcccttccagtttcgtcttccaaacccatcccaatttcgttactcatcgaagtgccattgtggaattaattaatatctcttgtgttaatggaattaaggagtgatattacttcatgatgtagagagtacatatcatagaagaacactagttttaatgcttttcaatttatgactgacactgattaggctatatatgtcaaaatgatcaccctttttactgattctaattgattgcgttggggttatatccggtgttggattgggtttgtggggtgggattggaagaaacatcctgaattcttcttaatgatactctgctctatatgatttccaatatggtattgagtttgtgctaaatgtgtaagtatttctccaactgttagcaatgaatcataatttttcattttcagacaaatttgcagtgctttggattgttgaaacttgcaaattaaccactggcatgctttaaatgttgtgactttcatgtttaacgaggaaatttagagcagcttatatttcacttatctgatgctgctacttcgttgcatgatattaataaatagtttgatattgtaggtggaaagggcggtcccgaccaattgttcatggctgatctgacctattggattgctcagaatcctccaccggcccatttcttccttatatctggcaacaaaggccttgcaaacattctgcatcgcctccggatgagcaattataatgtactgcttgcctgccccagtgctgactctagtgtattgtgcagtgcagcaacgattatgtggccatgggatgctttagttaaagggttggatttctcaccaaaacattttaaccaaccacctgatggtatatccttttcttggtacggtcactataggggaccccttgatgacttgttcttgaactcagagtcagatgactctatggcagagtcagaggactccctggcagagtcaagggactccaaggcttttcaaccacataccaagtcagtgaaaccacctattttacccaaatctgtggccaatggggttaggcaagtactgtactcctttcctgaaggtatcagtcttccaaatcttcgagcagagcttagaaagaatcatgtgttcatggataaaggattatttggcttcaaaaacttctcttctcttctccaagccatgcctgatgttgtgaagtttatagatcctctaccaggtgaaagaaaccagcctgctgtggttggggtttccaagagatcaatggagcctgctgagcaaatttacaagggaaagagttctgctcaaagcagtggtgagttcaaacgcctcgttcagactcttaatgagaaaccaccatcatcacatgtcccatcttcttcatcagatattttatctgcggaccgcaagaaagttctagcagttgatgccccatcttcccaatctgacttgttatctaggaaccaagagaaagctccccctgttgatttgactacacaacctgaaacacctgcaagctgtatggaagctgatgtggagagtgttgctggagcttctgcctttacaggagagcaaattactgttgacaaaaaggggctatttgaaaggatttgtgtactatggaatgatacagagcctgttaagcctatgctttctccgtctcaagatgatacccattctaaaggctccaatgatttactaactcagtatgccaatagtaacgaacataacagtcttttgacaaggaccttgaagatcttttccacaactgacaattcagatggagacaatgttgacagcacttcagcaattagcagcagtttctcaaatatgactgccaatgaccattcggacaaattaaatgtcaaggagaatgtagggaatacgatcatccattctagtagatcagttgacacgagcaacgctgaacataaagttgggtttatagaaaaaagcaaaggaatatttagctgggctgcaaagtggtgggcgtctggaaaaccagacacagatgacaatttaagttcagtacatatcaatgatggaacaagggaagaatcagaaaaagaatctgcatttgtaaagacagctgctactgcaagtgaacagcaagtaggagttgaactgttcatgaaaccttacttctgggatgcactacagcaatatttgtctacccctcatggatcagatcttgtttcaaaagcaaagacaaggtattctgcttctcaaattacttttatctacatatataaatgtttctactttgcctgcaattctatctttagcagattccaacatgcacagatagtaactgtagttgacattgaacaaaaatgccatatcctaactacaagtccatggttctgattgcaagctgctcttttactatgctaacagcaagcagaaactaatctcttgcagcacaccaagagataatcaaaatggtaagaactgaatatgcaagcatgcggggtgataatggctgctggctgtgatcatattcaataattgtagttcttatattttactttataattgcactttcctcttcaagttcctgattttattctatattttgttaccaatgcaaatcttatcacagaagatacgaaataaatgcagtcttaaaataaatgatgactcaaataatttcatcttttataattcttgttcttaggtggacatggacccaaatgtctcacctcaaatataactagaatcatttctgagtaaagcttcactcaacctagctgcttgtttttgccagggaggagttagcgcatggactacagaagcaaggccattggcctctaaaaagccttggtgggaaacaccaccaccaattagtagatttgcttatctcagaaaagcaatggatcaaagaatcttcatcacaaacgtctccttttcgacttgccctcccccagagaagagctcgttctccactactttcattttttacgaatggaaggccatcaggccagcgtaaacatgtcgatgacagaagcccaactctgtctagaacgtcggtccatgttttacctacaaaaaatgggaagggtcaggccagctgcaagagcaatgagaatcaaagtaagagtgatgactttttggagaaagagcttggtccagtatctgacagtggtaaaccatatcgacaaaatgataaagcagtccggcatcatcctcctacctgttcagatgatgaattttctgatgatgaaaatcatgaggtggtccaagaggctgggagagatgcagcacaaagttcactcttcaaaattattgattcgtggaacactagtaagactatttgttctagcaagaaacagcacggcattggtggtatagtggactgctctagaatcaacagaggtaatggtggtgacaattcgatcacagaaaatgcagaaaaggctacaagcttatcaaaacattcttatatgacctcagattcagattcagattcagatgaagagaagttattcaacagtgtcttgggcagtctgcagaatgcaaagaactcaagtttgcccggttgaaatgatgtatgcagtcatactaaccccatgaactcttctgtaatcaatttggttccataccatcatgtgataatttgatctttctgccattctgggctaggtggaggcgtggagcagcttgaggatgctttagaaacatcttcccaagctcagttagatttatgaagatcacgttacagtagaatgttctgtttattttttattttgttggagaggaatcctcatattcttttgagatgctaaggtttgtgctggtgtagt</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0167300, RefSeq:Os11g0167300