Os11g0168200

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Revision as of 09:02, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0168200| Description = 60S ribosomal protein L3| Version = NM_001072376.1 GI:115484364 GeneID:4349879| Length = 2868 bp| Definition = Oryz...")
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Gene Name

Os11g0168200

Description

60S ribosomal protein L3

Version

NM_001072376.1 GI:115484364 GeneID:4349879

Length

2868 bp

Definition

Oryza sativa Japonica Group Os11g0168200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:3277366..3280233

Sequence Coding Region

3277629..3277713,3278399..3278509,3278791..3279095,3279218..3279627,3279754..3280012

Expression

GEO Profiles:Os11g0168200

Genome Context

<gbrowseImage1> name=NC_008404:3277366..3280233 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:3277366..3280233 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgcacaggaagttcgagcacccgaggcacggatccctcggcttcctcccgaggaagcgctcctcccgccaccgcggcaaggtgaagtcattccccaaggatgacgtcaacaaaccatgccacctcacctcctttgtcggttacaaggctggaatgacccacattgtgcgtgaggtcgagaagcctggttccaaactccacaagaaggagacctgtgaggctgttaccattattgagacacctcctattgtcgttgttggacttgtggcctatgtgaagactccacgtggcttacgcagtctcaactctgtctgggctcagcatcttagtgaagaagtaaggagaaggttctacaagaactggtgcaagagcaagaagaaggctttcaccaagtatgctctcaagtatgatagcgatgccggcaagaaggaaatccaaatgcagcttgagaagatgaagaagtatgcttctgttgtccgtgtgatcgtgcacactcagattaggaaaatgaagggcttgaagcagaagaaggctcacctcatggagatccagatcaatggtggtaccattgccgataaggtggactatggatacaagttctttgagaaggagatcccagttgatgctgtgttccagaaggacgagatgattgacatcattggtgtcaccaagggtaagggttatgaaggtgttgtcacgcgttggggtgtcactcgccttccccgcaagacccacaggggtctccgcaaggtcgcctgtatcggtgcctggcatcctgctagggtttcctatactgttgctcgcgctggtcagaatgggtaccaccaccgcactgagatgaataagaaggtttacaagatcggcaagtctggccaggaaagccatgctgcctgcactgaatttgacaggactgagaaggacatcactcccatgggtggcttccctcactacggtgttgtgaagggcgactacctcatgatcaagggttgctgtgttggccccaagaagagggtcgtcaccctccgccagtccctgctcaagcagacctctcgtttggcgctcgaggagatcaagctcaagttcatcgacacctcgtccaagttcgggcacggtcgcttccagaccaccgacgagaaacagaggttcttcggcaagctcaaggcttag</cdnaseq>

Protein Sequence

<aaseq>MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVNKPCHLT SFVGYKAGMTHIVREVEKPGSKLHKKETCEAVTIIETPPIVVVGLVAYVKTPRGLRSL NSVWAQHLSEEVRRRFYKNWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYASVV RVIVHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMI DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYH HRTEMNKKVYKIGKSGQESHAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVG PKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEKQRFFGKLKA</aaseq>

Gene Sequence

<dnaseqindica>264..348#1034..1144#1426..1730#1853..2262#2389..2647#gtcctagggtttaccctgctccgcctccacacacaccccaccgccactcggcgccgccaccccgcaccaggtaaccatctcatccttcgcctcccctcgattcgctgctcgcctgcggcggcggcgcggctaggccatttcgttgccggcgtcggcctgcgggttcaccggtgggtgctttgccgcgtttgcttttgtcgtggatctgatggagtttgcgttttctcgcgggattttgtaggtaagggaggaggagtaagaagatgtcgcacaggaagttcgagcacccgaggcacggatccctcggcttcctcccgaggaagcgctcctcccgccaccgcggcaagggtatgctcactcacctactctctctctctctctcttttgcttgtgcggtgctgtatttgtagagcttgcgccttgtatggtagagtagaaacttgttggatcctcttggtagaaaataggatgtagtcgtggacgagatgctgttgctgtatggatctataggcctagttctgtgtgcctggctagattgttgtgcgccccagtgttcttagcaaaatggactttgattctggtgctctgtatatatgacctgaaagcctatgctctatttgtccccataatttctttttgttagtgtaatggtccacataatttctttttgttagtgtaatgggggaaaatagtaaaaatgaggtaataattctatgttgatctgatcaatccatgtgcttccatcattgattgttgaattcctactaagagcatacccctgcggtgatgcatttccccatatatctgcatatctgacatgagtgtactctgcctatttttcaaaatgctgaaatttattgtttttcttgccaataatatccaagtttgggaattctttctagcagtctctaaggcttagcttcaacttttagttttttcttgttccagtcgtcttctcggtgccattttgcactgccagttgtttatgtgtgattacactaccaatctgatattttgttctctgttattgcagtgaagtcattccccaaggatgacgtcaacaaaccatgccacctcacctcctttgtcggttacaaggctggaatgacccacattgtgcgtgaggtcgagaagcctggttccagtatgtgtctaatccttttgccttttgccaatgctattttgttcaacctggaaatagatgaccatgtattgtgactatgcggaagaagcaactacattagtttcatctgttgttcttaattttacttggaagaacataatattctgaattaatggcaacaagtcctaacatagttgagtactggcctttagccaagactttaatactaagactttagtattcatctgaatatgcatactactgaagagatttaaccttgtcatttttctaatgcttttcagaactccacaagaaggagacctgtgaggctgttaccattattgagacacctcctattgtcgttgttggacttgtggcctatgtgaagactccacgtggcttacgcagtctcaactctgtctgggctcagcatcttagtgaagaagtaaggagaaggttctacaagaactggtgcaagagcaagaagaaggctttcaccaagtatgctctcaagtatgatagcgatgccggcaagaaggaaatccaaatgcagcttgagaagatgaagaagtatgcttctgttgtccgtgtgatcgtgcacactcaggtcagtaacctactgttattttactatcttgtattttgagcccttctattcagttaattggatggtaaccatgtgctgtaaattgtttgttcattctcattctaaatctttatgtgcttcagattaggaaaatgaagggcttgaagcagaagaaggctcacctcatggagatccagatcaatggtggtaccattgccgataaggtggactatggatacaagttctttgagaaggagatcccagttgatgctgtgttccagaaggacgagatgattgacatcattggtgtcaccaagggtaagggttatgaaggtgttgtcacgcgttggggtgtcactcgccttccccgcaagacccacaggggtctccgcaaggtcgcctgtatcggtgcctggcatcctgctagggtttcctatactgttgctcgcgctggtcagaatgggtaccaccaccgcactgagatgaataagaaggtttacaagatcggcaagtctggccaggaaagccatgctgcctgcactgaatttgacaggtaccaattcgtctaccagatattacaccagcactccatgattgcaaatctgtcttctgtttgatatgctattgcatctgtttgcgagcgaaacttaaacgatattgtgcttgctcttgcgctcaggactgagaaggacatcactcccatgggtggcttccctcactacggtgttgtgaagggcgactacctcatgatcaagggttgctgtgttggccccaagaagagggtcgtcaccctccgccagtccctgctcaagcagacctctcgtttggcgctcgaggagatcaagctcaagttcatcgacacctcgtccaagttcgggcacggtcgcttccagaccaccgacgagaaacagaggttcttcggcaagctcaaggcttagtttgtgcggttcctcagcaaagtcagaatttgtcaaaacgatcatcactactctatacttggttctcttctcttgatattttctggggtattaagttttgtagcagatgtttcaggacctgttgatctatgaatttgtgctcccttctgctgtccctaccttaactctgttgaaccctatggattaaatctcgtaatgcggttttgctagttgcttgttgt</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0168200, RefSeq:Os11g0168200