Os11g0168500

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Revision as of 09:02, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0168500| Description = Similar to AP2 domain containing protein RAP2.6 (Fragment)| Version = NM_001072378.1 GI:115484368 GeneID:4349881| Le...")
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Gene Name

Os11g0168500

Description

Similar to AP2 domain containing protein RAP2.6 (Fragment)

Version

NM_001072378.1 GI:115484368 GeneID:4349881

Length

2213 bp

Definition

Oryza sativa Japonica Group Os11g0168500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:3290893..3293105

Sequence Coding Region

3290893..3291593,3292850..3293105

Expression

GEO Profiles:Os11g0168500

Genome Context

<gbrowseImage1> name=NC_008404:3290893..3293105 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:3290893..3293105 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtgcggtggtggcaaggtggcgagcccgccgggaccacgactgccgcggctcgccggcgccggcggcgaggaagaagaggaggaggcggcggctggaatgctgtcgaggcatggacaggcgagggagatgtctgtgatggtgtccgcgctggcgagggtggtcgccggcggcggcggcggcgaggcggaggagtggtggccgccggcgtacggcgcggcgccgctgccaccgtctacttcccctgcatctcacgagcacgcagcagccatggcggcagggcagtacgcgccggcgacgtcgtcggcgatggcgtcaccgcgcgagcaggcctcctcgccgtcgtccggcgacgccgccggcggcggcggcggcggcggcaggaagcggtaccgcggcgtgcggcagcggccgtgggggaagtgggcggcggagatccgcgacccggtgaaggcggcgcgcgtgtggctcggcaccttcgacaccgccgaggccgccgcgcgcgcctacgacgacgccgccctccgcttccgcggctgccgcgccaagctcaacttccccgaggacgccgcgctcctgccgcctccgcctccgcctcctgcgccggcgccggcgccgccgcagtcgcaggggatggtcggcgtcggcgaggagtactccgagtacgccaggttcttgcagggcgccggcgagccgccgcatttcctcgagcagataatggaggactcgcctcggccatcgacggcggccggcgcgtcgtcgtcgtcgtcggggcagtcgtcgtttccgttgttctacagcttcgctggacatgagcttggcggcaacgaagcgaaccttgcccgcccgccggagagcggcggcgctggtggtgacggtgggaggggctcctcgccgccggtgacttggccgggctatgggtggggtgcgccgccgccgtgggacccatcgagatag</cdnaseq>

Protein Sequence

<aaseq>MCGGGKVASPPGPRLPRLAGAGGEEEEEEAAAGMLSRHGQAREM SVMVSALARVVAGGGGGEAEEWWPPAYGAAPLPPSTSPASHEHAAAMAAGQYAPATSS AMASPREQASSPSSGDAAGGGGGGGRKRYRGVRQRPWGKWAAEIRDPVKAARVWLGTF DTAEAAARAYDDAALRFRGCRAKLNFPEDAALLPPPPPPPAPAPAPPQSQGMVGVGEE YSEYARFLQGAGEPPHFLEQIMEDSPRPSTAAGASSSSSGQSSFPLFYSFAGHELGGN EANLARPPESGGAGGDGGRGSSPPVTWPGYGWGAPPPWDPSR</aaseq>

Gene Sequence

<dnaseqindica>1513..2213#1..256#atgtgcggtggtggcaaggtggcgagcccgccgggaccacgactgccgcggctcgccggcgccggcggcgaggaagaagaggaggaggcggcggctggaatgctgtcgaggcatggacaggcgagggagatgtctgtgatggtgtccgcgctggcgagggtggtcgccggcggcggcggcggcgaggcggaggagtggtggccgccggcgtacggcgcggcgccgctgccaccgtctacttcccctgcatctcacggtaaggaattgaagtgtgccatttagcttggatagataattagatcttttcgtggcagtattattatgtgttaattttgagtttaattagcatcattgcgtgtaaaaagttaattgcatgtgcttagcagtttagcccaagtagtgtgtgtgtgtttttttttactagtctcatccagaacagagcaacttcatctggtagtttcggatttccagtactcatttctaacttgcattcctcgtttcaatttgaaaactatttcttttgttttatatatagtcttttgctgacttactaatagttttttaagtactccatttctgccttgatgtttttttttcagctattgtctgcttctcctcgtgtttatcaatctagttcttcacatttgtcacgtggagagggtagagagtaattagatggatatataatggatggacgtggtggttagcaaagcaagaaacaattagagaatggataatgattccaaatgtgcctaatgattatcattagaacgcatagttgcatcatagtcggtgaggtacacacgtttttcagattaagtaacagtggaatatgatcacgtcaccttgcaagagtagaacacgtgtgtgtgttccttttgtcactgtcccattgggtccatttggtcacctgcatgtacaccaaactacctttgtttttcaaaagaaaaaaaacacgaatattagaaaatgacctgatatcaaataaatagaaagggtgagaattcaaacccagactagctaacccatcaccttatggagttagccggaaaatccctaggtgtttctcaagaaaaggtaaaacattgtagtaaaattttattgaacactatgttgaagatcttggaaaaaaaaagagggagcagagctaaaggaaacatttgttggttgtttatatagagtagtacatggtaattattctgcttattcgtcagattatcgttgcagattatttactccgatccatgtccttttagaatacgatttttcaaaatacttttttactttattgtttagaccacctattctaatttatttgttaagtttataatgtataacattagctttcatcctcgaacaatgttgaaaacaccacctaagctagagatacgacaaaatttcaacataaatttagaaatatctaaaaaatgactatttttaaaatgaatcataatatatctctaatttcgtttaccatagccttcagtactctgtttcggttggattttgcagagcacgcagcagccatggcggcagggcagtacgcgccggcgacgtcgtcggcgatggcgtcaccgcgcgagcaggcctcctcgccgtcgtccggcgacgccgccggcggcggcggcggcggcggcaggaagcggtaccgcggcgtgcggcagcggccgtgggggaagtgggcggcggagatccgcgacccggtgaaggcggcgcgcgtgtggctcggcaccttcgacaccgccgaggccgccgcgcgcgcctacgacgacgccgccctccgcttccgcggctgccgcgccaagctcaacttccccgaggacgccgcgctcctgccgcctccgcctccgcctcctgcgccggcgccggcgccgccgcagtcgcaggggatggtcggcgtcggcgaggagtactccgagtacgccaggttcttgcagggcgccggcgagccgccgcatttcctcgagcagataatggaggactcgcctcggccatcgacggcggccggcgcgtcgtcgtcgtcgtcggggcagtcgtcgtttccgttgttctacagcttcgctggacatgagcttggcggcaacgaagcgaaccttgcccgcccgccggagagcggcggcgctggtggtgacggtgggaggggctcctcgccgccggtgacttggccgggctatgggtggggtgcgccgccgccgtgggacccatcgagatag</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0168500, RefSeq:Os11g0168500