Os11g0173500

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Revision as of 09:02, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0173500| Description = Protein kinase-like domain containing protein| Version = NM_001189450.1 GI:297728030 GeneID:9266358| Length = 4700 b...")
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Gene Name

Os11g0173500

Description

Protein kinase-like domain containing protein

Version

NM_001189450.1 GI:297728030 GeneID:9266358

Length

4700 bp

Definition

Oryza sativa Japonica Group Os11g0173500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:3616513..3621212

Sequence Coding Region

3618565..3621212

Expression

GEO Profiles:Os11g0173500

Genome Context

<gbrowseImage1> name=NC_008404:3616513..3621212 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:3616513..3621212 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagcctattgcaattggacagtcgttcgttctgctactggtttttagtactgtgagtgttgtcatttgctctgatggaaatgagacagatcggctgtcactgcttcagttcaaacaggctatcagcctcgacccacagcatgccttgctctcctggaatgatagcacccatttctgcagctgggaaggtgtctcatgtagtttgaggtatccacgtcgtgtcacttcccttgatctatctaacagaggtttggtggggctcatatctccttcacttggaaacctgacatctcttgaacacctcttcctgaataccaatcaactcagcggacaaatccctccgtcacttggtcacttgcatcaccttcgatcactttacttagcaaacaacacgctacaaggcaacatacctagctttgctaattgttctgctctcaaaatacttcatctaagccgcaatcagattgttggacgtattcccaaaaatgttcatttaccaccaagtattagtcaactgatagtaaacgataataaccttactggtaccatccccacttcacttggcgatgttgcgacactaaatatacttattgtttcatacaattatattgaaggcagtatcccggatgaaattggaaagatgcctgtcttgacaaacttgtatgtgggtggaaacaatttatctggtcgatttccactagctctcacaaacatttcttctcttgttgaactgggacttggcttcaattattttcatggtggtctgccgccaaatcttggtacttctctacccaggcttcaggtgcttgaaatagcttctaatctctttgaaggacacctcccttattccatttcaaatgctactagtctttacaccatagacttttcaagcaattatttctctggggtggtgccaagttccatcggtatgcttaaggagctttccttgttgaatcttgagtggaatcagtttgagtcgttcaataataaagatttggagttcctgcacagcctaagcaattgcactgaccttcaagtgctggcactgtatgacaataaactgaagggacagataccatattcattaggcaacctttctatccagcttcagtacctctttctgggaagcaatcaactatcagggggctttccctctggcataagaaaccttcccaacctgatttctctaggtttgaatgaaaaccattttaccgggatagttccagaatgggttggcacacttgcaaatttggaaggcatatacttagataacaacaagtttacaggttttcttccatcatccatatccaatatatcaaacctggaagatctccgcctttccacaaatctatttggaggaaaaatacctgcaggcttgggaaaactccaagtccttcatctaatggaactttctgataacaatctccttggcagcataccagagagcattttcagcattccaacgttgacacgttgtatgctatctttcaacaaactagacggggcacttcccactgaaattggcaatgccaagcaacttggatctctgcatctatcagcaaataagcttactgggcatattcctagcaccttgagtaactgtgatagtttggaagaactacacttagatcaaaattttcttaatggaagcatccccacatcattaggaaatatgcaaagcttaacagcagtcaacctgtcttataatgacctatcaggatccataccagattctcttggtagattgcaatctcttgagcaactagatttgtcattcaacaatctggtaggagaagtcccaggcataggggttttcaagaatgcaactgccatacggttaaacagaaatcatgggctttgtaatggggcactggagctggacctacccagatgcgctactatatcttctagtgttagtaagcacaaaccatctcatctactcatgttttttgtcccatttgccagtgtggtttcactagctatggtcacatgtatcatcctgttttggaggaaaaaacagaaaaaagaatttgtctcgttaccttcttttggtaagaagtttcccaaagtttcttatagggatctagctagggcaacagatgggttctctgcatccaatttaattggcaccggaagatatggttcagtatatatggggaagttatttcatagtaaatgtccagttgctgtgaaagtcttcaatcttgacataagaggaacacagaggagctttatatcagaatgtaatgctttaagaaatcttcggcatcgcaacattgtacggattataacagcttgctcaacagttgattcgaaaggaaatgatttcaaggctttaatttatgaattcatgcccagaggtgacctgtatcaagtcctatattcaacctgtgctgatgaaaattcttcaactagccattttggtttggcccaaagggttagcatagtgatggatatagccaatgcattggagtacctgcacaatcataacaaaggaattattgttcattgcgatctgaagcctagcaacattctcttggatgataatatgactgctcatgttcgtgactttggcctttcaaggtttgaaatttattccatgacatcatcttttggttgctcaacttcttcagttgcaatcagtgg</cdnaseq>

Protein Sequence

<aaseq>MKPIAIGQSFVLLLVFSTVSVVICSDGNETDRLSLLQFKQAISL DPQHALLSWNDSTHFCSWEGVSCSLRYPRRVTSLDLSNRGLVGLISPSLGNLTSLEHL FLNTNQLSGQIPPSLGHLHHLRSLYLANNTLQGNIPSFANCSALKILHLSRNQIVGRI PKNVHLPPSISQLIVNDNNLTGTIPTSLGDVATLNILIVSYNYIEGSIPDEIGKMPVL TNLYVGGNNLSGRFPLALTNISSLVELGLGFNYFHGGLPPNLGTSLPRLQVLEIASNL FEGHLPYSISNATSLYTIDFSSNYFSGVVPSSIGMLKELSLLNLEWNQFESFNNKDLE FLHSLSNCTDLQVLALYDNKLKGQIPYSLGNLSIQLQYLFLGSNQLSGGFPSGIRNLP NLISLGLNENHFTGIVPEWVGTLANLEGIYLDNNKFTGFLPSSISNISNLEDLRLSTN LFGGKIPAGLGKLQVLHLMELSDNNLLGSIPESIFSIPTLTRCMLSFNKLDGALPTEI GNAKQLGSLHLSANKLTGHIPSTLSNCDSLEELHLDQNFLNGSIPTSLGNMQSLTAVN LSYNDLSGSIPDSLGRLQSLEQLDLSFNNLVGEVPGIGVFKNATAIRLNRNHGLCNGA LELDLPRCATISSSVSKHKPSHLLMFFVPFASVVSLAMVTCIILFWRKKQKKEFVSLP SFGKKFPKVSYRDLARATDGFSASNLIGTGRYGSVYMGKLFHSKCPVAVKVFNLDIRG TQRSFISECNALRNLRHRNIVRIITACSTVDSKGNDFKALIYEFMPRGDLYQVLYSTC ADENSSTSHFGLAQRVSIVMDIANALEYLHNHNKGIIVHCDLKPSNILLDDNMTAHVR DFGLSRFEIYSMTSSFGCSTSSVAISG</aaseq>

Gene Sequence

<dnaseqindica>2053..4700#actctccgtccctcggtaactgtaagctcctcatggcgagccggagccggtgaccgctggcggcggcggcggcggcggcggaggcggaggcgggaggcgagggttactcgggatacggcggcccgagaggagatggcagcaggttgcaacaggcgttccatggtttcagggctccacaccctccgggtgacgccgagccggggagtatcgccgtcttggagaacctaggcctcctatcgccaaatctacgcccatcaacgagacctatcagctgcgctgggattacttccgaggttagcccaaaaaaccgaatctctactatctgaaactctgaaccatgacagcatgttcacaattcttaaaactttgggagttggtatatgttaatatatcgttgactactgtaactcaggtgtaccttcagttcagcggctgaaggtaccaattcatgcgaatagtacaacgtttttagattaaattagatggtgatgatctataagtttcattgatttgagtgaggataccagtgtaagatatttgtgaacatatttaccaatatgattactctatatgtatttggtcactgaaagtagggtaattttaccatccttaaaaaggtaccaggagttatcacattttctagccacctccaagtactttctcaaggaccataaaatttctcctgaaagtatgcttgatatcgaatgttcctgaccttcaatcgtacataacaatttaatttcaggggaataatagaaatggctggagagacttgatgaagatggataggtgggtgactgaacccttgggtgatagctggttgttggcaacttggcgtgcaacttggtacatcactcattacagggagaagcgcatgctagttgagatggaggagctcctctgcttcttcacggtagaacatcactatcacaggtaattgaaccaaactgtgtagcttgtagcctctcttatggaggtcggaccaagtcactggttaattgagcctatctttgactgctgatatctcatgggatcctgttgtgacataattcatgtttcatggggttctatagttttagctttcatggcattcgatccataaaaaatggacctacagtacaagcgtcaagtaaatcacatgaccagtgtttcagaaatgcataatttgtgtttgaaaaaagagagacatgatttgaagaagtttcatggacgtatcaagtagattagaaagatttgcgcggagtatccgagtagggacagaggagactcctggttaccattccacgtacattttctaaatcctatcctctaatagtagagtttccaagggttgatgggaatccattccaattggccatcgccatctctgtcccaatcacatactgttctgctctgcttgagagtgaactcccttatgtttttttgcaatttttccatgtgaaagattatttcgatagcagtggcttccacttccagaatttggaggcttatctggagcagtggctagaagtgaatggactgcaaatttgatagatccttctagactgcagctggaaagatgacctgctagaagaggcagatttaaggcttgatggatagaggagagaggaacctagtccaaatgaaaacacctataagtaagtagcagctggccacaagtacatgacgacctacgcactgctgctgctccaactggcctgcatcgtattctgcaaggtacacagctcgatctagtcatttttcctccctcatcaagtattcgcttgtgtagatctcatggagcttagtactattcatcagggtttggtttgtcactcactcctcatgagttagtttctgccagaaagagtgaaaatttaccattgttggacttttactgaggaatataaatagctcttatggtaaaagtaagttcaaaagatccttaaggtattttcgtacttaacaaataactaatgttaatatctgcttccagggacatctaaattgtgctgtccttttttcagctttgcatataataggaaggtgatacacaatactcatagcgttggcatgaagcctattgcaattggacagtcgttcgttctgctactggtttttagtactgtgagtgttgtcatttgctctgatggaaatgagacagatcggctgtcactgcttcagttcaaacaggctatcagcctcgacccacagcatgccttgctctcctggaatgatagcacccatttctgcagctgggaaggtgtctcatgtagtttgaggtatccacgtcgtgtcacttcccttgatctatctaacagaggtttggtggggctcatatctccttcacttggaaacctgacatctcttgaacacctcttcctgaataccaatcaactcagcggacaaatccctccgtcacttggtcacttgcatcaccttcgatcactttacttagcaaacaacacgctacaaggcaacatacctagctttgctaattgttctgctctcaaaatacttcatctaagccgcaatcagattgttggacgtattcccaaaaatgttcatttaccaccaagtattagtcaactgatagtaaacgataataaccttactggtaccatccccacttcacttggcgatgttgcgacactaaatatacttattgtttcatacaattatattgaaggcagtatcccggatgaaattggaaagatgcctgtcttgacaaacttgtatgtgggtggaaacaatttatctggtcgatttccactagctctcacaaacatttcttctcttgttgaactgggacttggcttcaattattttcatggtggtctgccgccaaatcttggtacttctctacccaggcttcaggtgcttgaaatagcttctaatctctttgaaggacacctcccttattccatttcaaatgctactagtctttacaccatagacttttcaagcaattatttctctggggtggtgccaagttccatcggtatgcttaaggagctttccttgttgaatcttgagtggaatcagtttgagtcgttcaataataaagatttggagttcctgcacagcctaagcaattgcactgaccttcaagtgctggcactgtatgacaataaactgaagggacagataccatattcattaggcaacctttctatccagcttcagtacctctttctgggaagcaatcaactatcagggggctttccctctggcataagaaaccttcccaacctgatttctctaggtttgaatgaaaaccattttaccgggatagttccagaatgggttggcacacttgcaaatttggaaggcatatacttagataacaacaagtttacaggttttcttccatcatccatatccaatatatcaaacctggaagatctccgcctttccacaaatctatttggaggaaaaatacctgcaggcttgggaaaactccaagtccttcatctaatggaactttctgataacaatctccttggcagcataccagagagcattttcagcattccaacgttgacacgttgtatgctatctttcaacaaactagacggggcacttcccactgaaattggcaatgccaagcaacttggatctctgcatctatcagcaaataagcttactgggcatattcctagcaccttgagtaactgtgatagtttggaagaactacacttagatcaaaattttcttaatggaagcatccccacatcattaggaaatatgcaaagcttaacagcagtcaacctgtcttataatgacctatcaggatccataccagattctcttggtagattgcaatctcttgagcaactagatttgtcattcaacaatctggtaggagaagtcccaggcataggggttttcaagaatgcaactgccatacggttaaacagaaatcatgggctttgtaatggggcactggagctggacctacccagatgcgctactatatcttctagtgttagtaagcacaaaccatctcatctactcatgttttttgtcccatttgccagtgtggtttcactagctatggtcacatgtatcatcctgttttggaggaaaaaacagaaaaaagaatttgtctcgttaccttcttttggtaagaagtttcccaaagtttcttatagggatctagctagggcaacagatgggttctctgcatccaatttaattggcaccggaagatatggttcagtatatatggggaagttatttcatagtaaatgtccagttgctgtgaaagtcttcaatcttgacataagaggaacacagaggagctttatatcagaatgtaatgctttaagaaatcttcggcatcgcaacattgtacggattataacagcttgctcaacagttgattcgaaaggaaatgatttcaaggctttaatttatgaattcatgcccagaggtgacctgtatcaagtcctatattcaacctgtgctgatgaaaattcttcaactagccattttggtttggcccaaagggttagcatagtgatggatatagccaatgcattggagtacctgcacaatcataacaaaggaattattgttcattgcgatctgaagcctagcaacattctcttggatgataatatgactgctcatgttcgtgactttggcctttcaaggtttgaaatttattccatgacatcatcttttggttgctcaacttcttcagttgcaatcagtgg</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0173500, RefSeq:Os11g0173500