Os11g0175000

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Revision as of 09:02, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0175000| Description = Protein of unknown function DUF1618 domain containing protein| Version = NM_001189453.1 GI:297728036 GeneID:9270068| ...")
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Gene Name

Os11g0175000

Description

Protein of unknown function DUF1618 domain containing protein

Version

NM_001189453.1 GI:297728036 GeneID:9270068

Length

1704 bp

Definition

Oryza sativa Japonica Group Os11g0175000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:3705110..3706813

Sequence Coding Region

3705211..3705874,3706066..3706625

Expression

GEO Profiles:Os11g0175000

Genome Context

<gbrowseImage1> name=NC_008404:3705110..3706813 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:3705110..3706813 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacctcgtcgctgaccacgacgaccactccgtagtgctcctcgagatgcgttacgacaaggaaggctacgacgaattcgggatcgattacttcgtctacaattacgccgccgccgacgacgacggcgacgacgatgacccaccacggccgccgtcgttgtcgctgctcccgtcctactgggatccattggacgaggacgaaagaaggcggcgtcaggatccgaaggtgcaccagctggacgcagatagcaccggcctcctccgccgccgccgccgccgccacggcgaggacgacctcgtggtggcggagctcatcaccaccagggagagcgagagcagcaagctggaggaggtcaagctcctcgtgctccgctccggcgagtggagcgtcacgcgggcggagatcatccacgacggcagcaagggcgaggagctctcctactgggagaccgacatggccgtccccgtcggcgaccggcggctctgctgggtcgacctgtaccgcggcgtcatcctctgcggcgacgacctgttcgacgaaattcccccgcggctgcagatcgacggcgacggcgaccacaccatgttgtcatggaccatggacgccatgatcgacgccaccgagctctggtccctcgacgcctacgccggcatcccacgtgtcatcccggagtaccctgtcatcagcacagacgacgctgacgtcatctgcttcctcgtgaccgagccatacaatcacaaacaggggaaaccctatttcgaaagaacgacatgggagatgacgatggacaccaagaacaagacactgctatcagtatgcacatacgatgatgatatttcccaacgagagccatcttatggacacacttacattccaaacaattttgctacaaagccaccaccggccatcatctgcgaggcaacgacgacgatcacaaccgaaatcaacggtaataatctgtcgcaatctttgccatctgccaaacatctgcaggtgtcaaggatggctcctgaggagatattggtagcacttgaagagattcctgagctttctcgcgatgatttgctgaaagcgtatagtattctttgccgtgacaatggccgcctatttaggtctcttcttgggctcccaatgagtctgaggaagaagtggctgttgatagaaattaaggcttgtcgagattgtcccgtctgcagtgcatgtacaactgatggcctataa</cdnaseq>

Protein Sequence

<aaseq>MDLVADHDDHSVVLLEMRYDKEGYDEFGIDYFVYNYAAADDDGD DDDPPRPPSLSLLPSYWDPLDEDERRRRQDPKVHQLDADSTGLLRRRRRRHGEDDLVV AELITTRESESSKLEEVKLLVLRSGEWSVTRAEIIHDGSKGEELSYWETDMAVPVGDR RLCWVDLYRGVILCGDDLFDEIPPRLQIDGDGDHTMLSWTMDAMIDATELWSLDAYAG IPRVIPEYPVISTDDADVICFLVTEPYNHKQGKPYFERTTWEMTMDTKNKTLLSVCTY DDDISQREPSYGHTYIPNNFATKPPPAIICEATTTITTEINGNNLSQSLPSAKHLQVS RMAPEEILVALEEIPELSRDDLLKAYSILCRDNGRLFRSLLGLPMSLRKKWLLIEIKA CRDCPVCSACTTDGL</aaseq>

Gene Sequence

<dnaseqindica>940..1603#189..748#ataccggtcagagatgggttatctgtgacgggtgtttcatccgtcacaggtgattttgtcatcagtgaccactaatcactgaccaagaccaaacccgtcaaaggtgagggtttgggcccgtcagagatgacctggtccggcgtagtgtgagcttccgctgctccccgtgcggcaaggacggaccctcgatggacctcgtcgctgaccacgacgaccactccgtagtgctcctcgagatgcgttacgacaaggaaggctacgacgaattcgggatcgattacttcgtctacaattacgccgccgccgacgacgacggcgacgacgatgacccaccacggccgccgtcgttgtcgctgctcccgtcctactgggatccattggacgaggacgaaagaaggcggcgtcaggatccgaaggtgcaccagctggacgcagatagcaccggcctcctccgccgccgccgccgccgccacggcgaggacgacctcgtggtggcggagctcatcaccaccagggagagcgagagcagcaagctggaggaggtcaagctcctcgtgctccgctccggcgagtggagcgtcacgcgggcggagatcatccacgacggcagcaagggcgaggagctctcctactgggagaccgacatggccgtccccgtcggcgaccggcggctctgctgggtcgacctgtaccgcggcgtcatcctctgcggcgacgacctgttcgacgaaattcccccgcggctgcagtacgtgccgctccccgtggaggcccccgccggcgaattcgaggaggacagcgacgacgagagcacgcggagatgcctgatggcgagctcaagttcatcgacgtcttcccccgctgctgctgcggcgaccccggcgccaccctctgcgaccattctcgccacgccttcgtcatcaacatctggacactcaggatcgacggcgacggcgaccacaccatgttgtcatggaccatggacgccatgatcgacgccaccgagctctggtccctcgacgcctacgccggcatcccacgtgtcatcccggagtaccctgtcatcagcacagacgacgctgacgtcatctgcttcctcgtgaccgagccatacaatcacaaacaggggaaaccctatttcgaaagaacgacatgggagatgacgatggacaccaagaacaagacactgctatcagtatgcacatacgatgatgatatttcccaacgagagccatcttatggacacacttacattccaaacaattttgctacaaagccaccaccggccatcatctgcgaggcaacgacgacgatcacaaccgaaatcaacggtaataatctgtcgcaatctttgccatctgccaaacatctgcaggtgtcaaggatggctcctgaggagatattggtagcacttgaagagattcctgagctttctcgcgatgatttgctgaaagcgtatagtattctttgccgtgacaatggccgcctatttaggtctcttcttgggctcccaatgagtctgaggaagaagtggctgttgatagaaattaaggcttgtcgagattgtcccgtctgcagtgcatgtacaactgatggcctataacatgattgattaaaatatttgttatagtggtacttgtatacacttgtgggattaactgtgctaattctgctgaattaagttccttatttgttgtttttatt</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0175000, RefSeq:Os11g0175000