Os11g0177400

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Revision as of 09:02, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0177400| Description = ABC transporter related domain containing protein| Version = NM_001072418.1 GI:115484448 GeneID:4349927| Length = 32...")
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Gene Name

Os11g0177400

Description

ABC transporter related domain containing protein

Version

NM_001072418.1 GI:115484448 GeneID:4349927

Length

3220 bp

Definition

Oryza sativa Japonica Group Os11g0177400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:3836781..3840000

Sequence Coding Region

3837112..3838067,3839515..3839998

Expression

GEO Profiles:Os11g0177400

Genome Context

<gbrowseImage1> name=NC_008404:3836781..3840000 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:3836781..3840000 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>acgctcctcttctgcgccatgctccgcctcccggcctcctcccccgcagccgccaaggccgccgccgccgaggccgtgatcgccgagctggggctcgcgccgtgcgccgacaccatcgtcggcaacgcgttcgtccgcggcgtgtcggggggcgagcggaagcgcgtcagcatcgggcacgagctgcttgtgaacccgagcctcctcgtcctcgacgagcccacctccggcctcgactccaccgccgccgcgcgcctcgtcgccacgctctcgtcgctggcgcgcaggggccgcaccgtcgtcatgtccgtccaccagccgtccacccgcgtctaccgcatgttcgactccgtcctcctcctcgccgaggggacctgcctctacttcggcgccggccgcgacgccatggactacttcgccgccgtcggcttctcgccggccttccacgtcaaccccgccgacttcatgctcgaccttgccaacggattcgctcaaacagagtatgataattgcaacgcagccgatggcggcaacgtgaagcagtcgctgatctcgtcgtacaaccgagtgctcgcgccgcgggtgaaggcgtccatcaacgccggcgacgtccacggcggcgagcagcagccaccgccgccggcggcggagagctgcagcgggtgcacgagctggtcgaaccagttcgcgatcctgctgcggcggagcctcaaggagcggcggcacgaggcgttcacgtcgctgcggctgttccagatcatcgcgccggcgctggtggcgggggccatgtggtggcggtcgtcgccggcggcggtgggcgaccggatggggctcctcttcttcgtctccatcttctggggtgtgttcgcctccttcaacgccgtgttcgcgttcccgcaggagcggcccgtgctggcgcgggagcgcgcgtcggggatgtacgcgctctcgtcctacttcatgtcgcgcatggcgggcgacctccccatggagctcgcgctccccgccgcgttcaccgtcatcgtctacctcatggccgggctcaacccgtcgccggccgcgttcgcgctcacgctcgccgtgatcctctcctacgtgctcgtcgccgaggggctcggcctcgccgtcggcgccgtcatgatggacgccaagcgcgcctccacgctcgtcaccgtcgtcatgctcgcctacctcctcaccggcggcttctacgtccacaacgtgccggggttcatggcgtgggccaagtacacctccttcacctactactgctaccggctgctcatcgccgtgcagtacagcggccgcctcgcccgcctcctcccgccggaggaggcccgcggcgaggccagcccggccgcctgcgtcgccgcgctcgtcgccatgttcttcgcctaccggctgctcgcctacctcgcgctccgccgggtcaggaagtga</cdnaseq>

Protein Sequence

<aaseq>TLLFCAMLRLPASSPAAAKAAAAEAVIAELGLAPCADTIVGNAF VRGVSGGERKRVSIGHELLVNPSLLVLDEPTSGLDSTAAARLVATLSSLARRGRTVVM SVHQPSTRVYRMFDSVLLLAEGTCLYFGAGRDAMDYFAAVGFSPAFHVNPADFMLDLA NGFAQTEYDNCNAADGGNVKQSLISSYNRVLAPRVKASINAGDVHGGEQQPPPPAAES CSGCTSWSNQFAILLRRSLKERRHEAFTSLRLFQIIAPALVAGAMWWRSSPAAVGDRM GLLFFVSIFWGVFASFNAVFAFPQERPVLARERASGMYALSSYFMSRMAGDLPMELAL PAAFTVIVYLMAGLNPSPAAFALTLAVILSYVLVAEGLGLAVGAVMMDAKRASTLVTV VMLAYLLTGGFYVHNVPGFMAWAKYTSFTYYCYRLLIAVQYSGRLARLLPPEEARGEA SPAACVAALVAMFFAYRLLAYLALRRVRK</aaseq>

Gene Sequence

<dnaseqindica>1934..2889#3..486#agacgctcctcttctgcgccatgctccgcctcccggcctcctcccccgcagccgccaaggccgccgccgccgaggccgtgatcgccgagctggggctcgcgccgtgcgccgacaccatcgtcggcaacgcgttcgtccgcggcgtgtcggggggcgagcggaagcgcgtcagcatcgggcacgagctgcttgtgaacccgagcctcctcgtcctcgacgagcccacctccggcctcgactccaccgccgccgcgcgcctcgtcgccacgctctcgtcgctggcgcgcaggggccgcaccgtcgtcatgtccgtccaccagccgtccacccgcgtctaccgcatgttcgactccgtcctcctcctcgccgaggggacctgcctctacttcggcgccggccgcgacgccatggactacttcgccgccgtcggcttctcgccggccttccacgtcaaccccgccgacttcatgctcgaccttgccaacggtaattaacccaaaacactaattatactctattattattactttcttactttattcaacaaaagcagggaaaaaatcaggaaacataaatttcactaaatttgctcaatttgaatgaggatcaaattaggcaagttataaatcaagggattatcttttaattgggtgtagtagatatgaatggtgaggattagaccaatgatcacaaaggagacaagtaaacacacctggagagtaagtgtggagtgcacccaagaaaaagttcatgcaagagaggagataaaagttttttgaagggagaaaaaaaaagaaagagtggatggaggtgagtgccctagccttctcaccttcataccttttgtgcaaagcactttatggttgaaagatcacacacccaactcaactggacacctgtcatggatggaggagagtggaattagggcactatctaccttaccttaccagcatcagtggggctggaccgctgctggacatcactcatatcgggcccgaacccgctaccggtaaacccgctagcccggtcaccgaacggcggccgggctagcgggtaatgtcatattggatatccattctgtttccaccaatcttgttggttgtggtggctgcagaagatgatgagatccgacactagtggcagctttcagttggatctggttcctttgctagcttaattagtagttagcttgggcagcttttttttaagtatgagaattagcagcttctcttttaccttgggatcaagcaaaatcaatggagcatatgggcatgatatgcagtgtggatatggttccaagtgcctgtctcactagactaagaaaattatgctcccccctggctcatggtgatggcactttagacagaaggaatcatttttttggtaccaatacttctccttttggaagggtagagagctaagctatccccctttttggcccctcctttggcacctggccacttaagtaagtgccttgtagccagtctagcatatcaaagcaatggggcagagagagagagagagagagagagggtgtctccatgatccgattatatcgaggtcaaccgcgtcgtggcacgattgggtctaccgatccctaggtggagggggagcggcgttcatggcccgatcaaggtcccgtttggcagaactcctactcgtttggaagccatatcgtgcactatcagcttgggagttgggaatacacataaactgcaaaatgcgcagaaaaacaatttaaagaaaataaaaaacaaaaaacaaaaaggaaaataatgaatggatggaattttcaggagtgattattttccattgtgcctacctttatttgatctttttctgattgttactacattgttaagaaattatgatcaatcatcctacttatgatctttgacactgaacatttctgctctgttttttttctatgcaggattcgctcaaacagagtatgataattgcaacgcagccgatggcggcaacgtgaagcagtcgctgatctcgtcgtacaaccgagtgctcgcgccgcgggtgaaggcgtccatcaacgccggcgacgtccacggcggcgagcagcagccaccgccgccggcggcggagagctgcagcgggtgcacgagctggtcgaaccagttcgcgatcctgctgcggcggagcctcaaggagcggcggcacgaggcgttcacgtcgctgcggctgttccagatcatcgcgccggcgctggtggcgggggccatgtggtggcggtcgtcgccggcggcggtgggcgaccggatggggctcctcttcttcgtctccatcttctggggtgtgttcgcctccttcaacgccgtgttcgcgttcccgcaggagcggcccgtgctggcgcgggagcgcgcgtcggggatgtacgcgctctcgtcctacttcatgtcgcgcatggcgggcgacctccccatggagctcgcgctccccgccgcgttcaccgtcatcgtctacctcatggccgggctcaacccgtcgccggccgcgttcgcgctcacgctcgccgtgatcctctcctacgtgctcgtcgccgaggggctcggcctcgccgtcggcgccgtcatgatggacgccaagcgcgcctccacgctcgtcaccgtcgtcatgctcgcctacctcctcaccggcggcttctacgtccacaacgtgccggggttcatggcgtgggccaagtacacctccttcacctactactgctaccggctgctcatcgccgtgcagtacagcggccgcctcgcccgcctcctcccgccggaggaggcccgcggcgaggccagcccggccgcctgcgtcgccgcgctcgtcgccatgttcttcgcctaccggctgctcgcctacctcgcgctccgccgggtcaggaagtgatcgagcaccttggttcgatcgccgcccgtggtaattaggtagtaagctctattaattaattccggcgaagtgtaatcaaagacgtaacgccggcgagcgagcgagctagcgtgcgccgccggcgacggagaagacgtacggctcgatctgacaatggtgtagttgttggcatggagatcgaccatggcttctgccttcttctcgtcctcttcgttttaatttttttttctttcttttttctgtttttctcctgatccattgatggatcgaggtgtcaagtgtattattactgccaaattaattaaattaaactaaaaaaatgatccggtgt</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0177400, RefSeq:Os11g0177400