Os11g0187500

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Revision as of 09:03, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0187500| Description = Similar to Heat shock protein 70| Version = NM_001073940.1 GI:115484528 GeneID:4349971| Length = 3081 bp| Definitio...")
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Gene Name

Os11g0187500

Description

Similar to Heat shock protein 70

Version

NM_001073940.1 GI:115484528 GeneID:4349971

Length

3081 bp

Definition

Oryza sativa Japonica Group Os11g0187500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:4426377..4429457

Sequence Coding Region

4426421..4426658,4427483..4428944,4429214..4429247

Expression

GEO Profiles:Os11g0187500

Genome Context

<gbrowseImage1> name=NC_008404:4426377..4429457 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:4426377..4429457 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcctccaacaccaccaagaagggcggcggcggcggcggcccggcgatcggcatcgacctcgggacgacctactcgtgcgtggccgtgaggcggcgctaccgcagcgaggccatcaccaacgaccagggcaaccgcatcaccccctcctgcgtcgccttcaccgccgccgaccggttcgtcggcgacgccgccgagaatcaggccgcgctcaaccccaccaacaccatcttcgaagtgaagcgactgatcggccgccggttcagcgataagtctgtacaagaggacatcaagctttggcctttcaaagtcattgctggccgtgacgaccggccaacgatcgtggtccgccatgagggcaaggagaagcagttcgtccccgaggagatctccgccatggtgctctccaagctgagggacgccgccgtggcctacctcggcgagccggtcacggacgccgtcatcaccgtccccgtctacttcaacaacgcccagcgcgaggccaccctcgacgccgccaccatcgctggcctcaacgtcatgcgcatcatcaacgagccctccgccgccgccctcgcctatggcctcgacaagatgccgccggccagcggcggtgcagggaggatggtgctcatctttgatcttggtggcggcaccctggatgtctccctccttaacattggtcgtccgggcaacaacaacagcagcgacagcggcagcttcgagttcgaggtgaaggccgtcgccggcgacactcacctcggcggcgccgacttcaacaacgcgattgtgaagcactgcatcaacgagttcatcaggaagcacggcgtggcagcagaaggcatctggagcaaccagaaggcgatcaggaggctgaggaccgcgtgcgagagagccaagaggatgctgtctttcacgacgcttgccagcatcgaggtcgactcgcttcacgacggcatcgacttctgcggcaagatgagccggtcccggttcgaggagctgaacaaggagctcttcggcaagtgcgtcaaggccgtgaagaagtgcctcgaggacgccaagatggacaagaacgccgtggacgacgtcgtgctcgtgggcggctccagccgcatccccaagctgcagagcatgatccacgacttcttcgacgagaaaaagctccgcaggaacgtcaaccccgacgaggccgtcgcgtacggcgccgccatccaggcctccgtcctcaacggcgacgccgacgaagccgacgacaagaagcaggtgatgatcctgcgcgacatcacgcccctctcgctggggatcgaggtcggtctcgatcacacgatgagcgtcgtgatcccgaggaacaccttcatcccgaccaagaacgtgcggcgttactccaccatattcgacaatcagatcgccgtgagcatcaatgtgttcgaaggagagagcgcgagcatcctccgcaacaacctgctcggcaagtttgtgctgtccggcatcctcccggcgcccaggggagtgccccagatcgacgtcacgttcgagttcgacgccaatggcgtcctgcacgtgtccgcgaaggacatgggcactgggagcaagaacaacatcgccattaccaaccacagcggccggctgaagaaggaggacgtcgaacgcatggcgcgggaggccaggagctacaacaggaccagatcatctctagcgataacttctgggaacctggtgatctttcaatga</cdnaseq>

Protein Sequence

<aaseq>MAASNTTKKGGGGGGPAIGIDLGTTYSCVAVRRRYRSEAITNDQ GNRITPSCVAFTAADRFVGDAAENQAALNPTNTIFEVKRLIGRRFSDKSVQEDIKLWP FKVIAGRDDRPTIVVRHEGKEKQFVPEEISAMVLSKLRDAAVAYLGEPVTDAVITVPV YFNNAQREATLDAATIAGLNVMRIINEPSAAALAYGLDKMPPASGGAGRMVLIFDLGG GTLDVSLLNIGRPGNNNSSDSGSFEFEVKAVAGDTHLGGADFNNAIVKHCINEFIRKH GVAAEGIWSNQKAIRRLRTACERAKRMLSFTTLASIEVDSLHDGIDFCGKMSRSRFEE LNKELFGKCVKAVKKCLEDAKMDKNAVDDVVLVGGSSRIPKLQSMIHDFFDEKKLRRN VNPDEAVAYGAAIQASVLNGDADEADDKKQVMILRDITPLSLGIEVGLDHTMSVVIPR NTFIPTKNVRRYSTIFDNQIAVSINVFEGESASILRNNLLGKFVLSGILPAPRGVPQI DVTFEFDANGVLHVSAKDMGTGSKNNIAITNHSGRLKKEDVERMAREARSYNRTRSSL AITSGNLVIFQ</aaseq>

Gene Sequence

<dnaseqindica>45..282#1107..2568#2838..2871#ctaaaccccaaacgccctctgattgcggtgcggagggacatcagatggcggcctccaacaccaccaagaagggcggcggcggcggcggcccggcgatcggcatcgacctcgggacgacctactcgtgcgtggccgtgaggcggcgctaccgcagcgaggccatcaccaacgaccagggcaaccgcatcaccccctcctgcgtcgccttcaccgccgccgaccggttcgtcggcgacgccgccgagaatcaggccgcgctcaaccccaccaacaccatcttcggtcagaaaaacattcactcctttatactgctatgctagcttcttgttatttttcttccatcttccaagaactagcacgaactagtactgctatgtgcagggcctctgaatttctctcgctgcctgttcatgcttctgcggttttttttttaccttttgttaatggaatgctccggccaagaaaaaccttccttttaaactaaggttgtgtttggtttggtggatgaggttggatgtgagatgcccgtgcagatttttcatatgttcgattaatttgtgggcttgcaaaagatatggcggccgaaaaagaattactacctgaatataccagatgaatggatctggctgattttttttccaaattattagtattgcttatattgtacacacatctactcgatccacttcaaaaccaggcctattttgatttcggtcatttcggttcttccaaaattcctgaaatttcggtcttttcggcacttctttggtcagaaattttaaaagagggtgtgtttagttcacgccgaaattggaagtttagttgaaattgaaatgatacgatggaaaagttgaaagtttgtgtgtgtacaaaagttttgatgtgatggaaaaattgaaagtttgaagaaaaaatttggatctaaactcggccaaagtttaactgaatttgactaattgaccaaaaatagctcctatcttttctatactataaacattataaattactggaactaggctatttatgtttcactcaattgcttaacatgacttaaattattgatttatgtttcacccaaattcttaacatgacttgaattattgcagaagtgaagcgactgatcggccgccggttcagcgataagtctgtacaagaggacatcaagctttggcctttcaaagtcattgctggccgtgacgaccggccaacgatcgtggtccgccatgagggcaaggagaagcagttcgtccccgaggagatctccgccatggtgctctccaagctgagggacgccgccgtggcctacctcggcgagccggtcacggacgccgtcatcaccgtccccgtctacttcaacaacgcccagcgcgaggccaccctcgacgccgccaccatcgctggcctcaacgtcatgcgcatcatcaacgagccctccgccgccgccctcgcctatggcctcgacaagatgccgccggccagcggcggtgcagggaggatggtgctcatctttgatcttggtggcggcaccctggatgtctccctccttaacattggtcgtccgggcaacaacaacagcagcgacagcggcagcttcgagttcgaggtgaaggccgtcgccggcgacactcacctcggcggcgccgacttcaacaacgcgattgtgaagcactgcatcaacgagttcatcaggaagcacggcgtggcagcagaaggcatctggagcaaccagaaggcgatcaggaggctgaggaccgcgtgcgagagagccaagaggatgctgtctttcacgacgcttgccagcatcgaggtcgactcgcttcacgacggcatcgacttctgcggcaagatgagccggtcccggttcgaggagctgaacaaggagctcttcggcaagtgcgtcaaggccgtgaagaagtgcctcgaggacgccaagatggacaagaacgccgtggacgacgtcgtgctcgtgggcggctccagccgcatccccaagctgcagagcatgatccacgacttcttcgacgagaaaaagctccgcaggaacgtcaaccccgacgaggccgtcgcgtacggcgccgccatccaggcctccgtcctcaacggcgacgccgacgaagccgacgacaagaagcaggtgatgatcctgcgcgacatcacgcccctctcgctggggatcgaggtcggtctcgatcacacgatgagcgtcgtgatcccgaggaacaccttcatcccgaccaagaacgtgcggcgttactccaccatattcgacaatcagatcgccgtgagcatcaatgtgttcgaaggagagagcgcgagcatcctccgcaacaacctgctcggcaagtttgtgctgtccggcatcctcccggcgcccaggggagtgccccagatcgacgtcacgttcgagttcgacgccaatggcgtcctgcacgtgtccgcgaaggacatgggcactgggagcaagaacaacatcgccattaccaaccacagcggccggctgaagaaggaggacgtcgaacgcatggcgcgggaggccaggagctacaacaggaccagatcatctctagcgtaagtaaatcatactccctccgtttcacaatgtaagtcattctaacattttttatattcatattgatgctaatgaatctaaacatatatatctatctagattcattaatattaatatgaatgtggaaattgctagaatgacttatattatgaaacggaggaagtacattattattgttgtcttggtttggttttaatttaagcaaatcatactagtgctgtctgtgactttttggtttggcaaatcatctctatgtttgtatctgcaggataacttctgggaacctggtgatctttcaatgatgttctgcttctgcacctgcttgctggatgtcttacatctgcccatcgaactgatttcaatgacggggaaaagtttgtgctactaaatttttttgctaaaactaatctaggtctagtgactacttatctaaatgagctaatgcggaagatgatggcatactgacgtgtgtttgatggagccataattaatcttaagtcgcatttggcgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0187500, RefSeq:Os11g0187500