Os11g0189900

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Revision as of 09:03, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0189900| Description = Conserved hypothetical protein| Version = NM_001189468.1 GI:297728066 GeneID:9271253| Length = 6156 bp| Definition ...")
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Gene Name

Os11g0189900

Description

Conserved hypothetical protein

Version

NM_001189468.1 GI:297728066 GeneID:9271253

Length

6156 bp

Definition

Oryza sativa Japonica Group Os11g0189900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:4543410..4549565

Sequence Coding Region

4543410..4543471,4544234..4544309,4544756..4544815,4547306..4547468,4547546..4547600
,4547823..4547875,4548390..4548489,4549065..4549212,4549473..4549565

Expression

GEO Profiles:Os11g0189900

Genome Context

<gbrowseImage1> name=NC_008404:4543410..4549565 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:4543410..4549565 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgtcttcgggaggtggtggtggcgcgcggcatggtgtcgtcgccgcgtgggcgtcgttcttcagctcgcggatcgggctcgactgccaggaagctgtctcactgggaaagatagaggtggtgaatatacctgttgagattgggactgcaccctctgccaaacaggttcagcgattgacagaagttgtgtctgatagtgtgaagaagcccatttatcttcattgccaggaagggaatgttggggcatcctttgatagtgactatattctatcagttgcttctggtattactaatggaaaaccatccagcaatggagcctccacatctgttgaggaaaggtttacattggatcagtttggtcaggtaatcttgttgcaatgcagagttctagtccaaatgtgcagatcaattgataatcgatcagcaggcctgaaattcgtctcaagctgtacatgtaaggggggttttatacctacggcgctctcgtgggaggaggaagaggccgacacactaggccaggctggtgcaggaagaaagaggttgactgggccgcgtcagaagggaggaaaggaaacaggctttcccttgcaattgatgcatcttaaagagggttctgatccatacctgcccaaaattgaatgctacgagcataaccatctaatcacaaaggttgaaggagatgggggtgatagtagctataccgactggcagtacagcatactctggtgcagctggaggctcaatggtccatccaaatgccccatgtttgctgtttactccaatctgcccgcactcattgtcatttag</cdnaseq>

Protein Sequence

<aaseq>MVSSGGGGGARHGVVAAWASFFSSRIGLDCQEAVSLGKIEVVNI PVEIGTAPSAKQVQRLTEVVSDSVKKPIYLHCQEGNVGASFDSDYILSVASGITNGKP SSNGASTSVEERFTLDQFGQVILLQCRVLVQMCRSIDNRSAGLKFVSSCTCKGGFIPT ALSWEEEEADTLGQAGAGRKRLTGPRQKGGKETGFPLQLMHLKEGSDPYLPKIECYEH NHLITKVEGDGGDSSYTDWQYSILWCSWRLNGPSKCPMFAVYSNLPALIVI</aaseq>

Gene Sequence

<dnaseqindica>6095..6156#5257..5332#4751..4810#2098..2260#1966..2020#1691..1743#1077..1176#354..501#1..93#atggtgtcttcgggaggtggtggtggcgcgcggcatggtgtcgtcgccgcgtgggcgtcgttcttcagctcgcggatcgggctcgactgccaggttcgttggttcgatctcctgctgcttgtgagcatttcgtcgaacatctgcggagcggaccttggcgcactgcttgctgggttgatgcggcgtctaattcttttggctatcagatgagatagactgttgaggttgcattttggaggggaggacaattcagcggggagaaactagaatggttattgtcaaagggattcaaaattatagttgatctctgggaggaagatgttaaagatgatttatatcttttggcagttcaggaagctgtctcactgggaaagatagaggtggtgaatatacctgttgagattgggactgcaccctctgccaaacaggttcagcgattgacagaagttgtgtctgatagtgtgaagaagcccatttatcttcattgccaggaagggaatggtaggacatatgtgatggtctcgagatggaagcagcatgtcacttgtgctgagagactgtggatacacaaaatggctcattaaatgggaatggtaagcctgtgaagaatgatcaaacagaccagctcacaaacagcccaggtttctcctcagaaggtagcaaaaacagcacttctgtaatctgatggaacagtgaaggagagggaaacatgttacatagacattgaagcagcacggcataatctggatgtggcatagaagtgtatccaaaagtactgagcaagcacgacagtagtactgagcaaggtgaactgcatggcaccaggacagaacttcagtcaagctatatattagagagtaatccccttgaggcatggtttccttcttgagatgtgttccccaaacaaatgggatgactgacatttttagaagcaaaggagtatatccaaaatctgttctgaaccctcagtgacggtcgagtagtttactgaccacttaaggacaaaacagagtctcagcgctgaacaaaatgagccattgactataaagcagctgagattttatggtcttgaaaagttggggcatcctttgatagtgactatattctatcagttgcttctggtattactaatggaaaaccatccagcaatggagcctccacatctgttgaggaaaggtaaatcgaagcttcagtggtaacagttgatcctaggacatctgatgccagcaattctaaaggcaattgtcagcttggatcacaaaaatctgctgaaaggaacggtatcccttatctggagagaaaaaaaaacaggtcatattgatggatcatcaacacctggaagctaatggtaaatacaatttatttttctcgatagcctagcaacataatttcattaggataaaacctttattcgtacctgatatgtttccctcttgttaagatttaactcagggtgctcttcattcaatagccttgccagattcatgcgacatgttaatatgacttgggttgtgctgttgctcggtggagaagatcgttaagtatctcctgtcatgcatgccgctgccgtcgacattctttcttgatggccgtgagctggttatattctatccggtgttatcccagctgatgagcatcccgttcaatttttttctttgtttacattggttaagcttgatacatttttcaggtttacattggatcagtttggtcaggtaatcttgttgcaatgcagagttctaggtatgaacggttcatatatttcatatcatagttgtatacagtggtttcttctaatcattcccatgcgattcctgggaatagccaagtcggtacatggtcagatattaggaaggaagagcagtataatatctatgtgcagtttagttctaatttacaggatattcccacacgttggctttgtttattgactgagatttcttttttcttctgtttttactgcagtccaaatgtgcagatcaattgataatcgatcagcaggcctgaaattcgtctcaaggtatatacatggactctgctacaaatatatatgtttgtctgatctttatttgcgtataaataataaataattgacagctgtacatgtaaggggggttttatacctacggcgctctcgtgggaggaggaagaggccgacacactaggccaggctggtgcaggaagaaagaggttgactgggccgcgtcagaagggaggaaaggaaacaggctttcccttgcaattgatgcatcttaaagaggttatcgtttcaacaattgacagatatcctgcatagcattacagtaagttgctgaataccatttaatcttcctttcatatttttttaaagatatattcctattattgttcaactgtaactgatttgaaaaaccattagacataacatggcatgcaagcccatcgttatagttcactatatgtgacacaatgatgtgcgtgctattggctatcgcaaagaacttgcagagccattctatgaaatgtagccttgctggcgatgaattccatggtggcatccttttctcttgcttttgtgcctcagtgccttcatgctttttttttcttttgatttgtggtttccatggatatttcacaagggtccatgttttgtatatgttagctgccggacaagatgactaatagattaaatttctacgcatacctgatgcattaaaaataatagttctgaaatagattttgacataagtgagaactaattaaattatcttgtgtactgctaaacatagtagactggttttgtatggtaagattttgccatatggggtctcggtttgttaggtatattatatgtttctatcctgctagatcgtgtgatgtttttctataaattctaaaatgtcccttccttcatagcatcaatattctacatcatgatagtcgtgataactgcatgcattttttaatttctacaaacgaactcaaattatcacatttgatcttccttttagcgatcatgttgtgcatcttttgaaatgatctgaaactaatatgataatacacataattgatctgaaactaatatgatctggacaggagaggacccgagaatgctctctgttgggtcaactagctgttatgttctgacttgtgctctattgcttagattgttgtttgtctacgtgcttgagggaaatatttttaacctgttgaacctagagctcaacaactcctggtgatagattagttcactagaagagagtcctttagttgttcagggaagataattgcaatcttttttatgtttaggcctattacctaagagtcaaaatacccaggattgtgacgtggaacagtgctccaatatgagtagtgaccaaagcggattaaattgaattgtgaactcttttaccaagtgaacagagactgtagtgattcatatagccaggtcagtactaaaatcctatcgatcagtataaaattgcaatctcatttggtgttgcctttttcttggtggtcataggagtaaacccttttttcatgcttcaaaggcatatggttttgtataaaattccattgctcagtatagaatttaaaactgtcatttttgtctgaacgaataaactattggtcttctccaagatttgttcactaagttgcaatcgatagcacatttctacattttgttggcacggccaattgcgcctccacggttgcctcatatgctatcactgacatttcttattattcattcctgtttcttagagaacagtatttatttatgcaaaattgcaactcgatgtactgaggattttagaagtttttaaagatcctgctagagaattctttccatgaaagttgtacgattcatggttagaatgcacttttttgtcctgatctgttctgagcatctcattaatatatagtaagatgttggactacatgtaattagttgaaagttctttaggatcgtatgaggagtacaatacagtcaatacttgtagaataatttcttccatagtttggaaatgttctctggctttagtttatagaaatattttgattgatcaacaattcctgtttaagagcttgcttcaaaactaaaatgagctgtatgaattcatgggaatgtgggatacaccattggacttgtcttctggttatttaattgattggatacaataaccccttttcatgtcaagttgattaactggtattttatggtagggattttttgtgtgacacagttttgtatttttgtgtataaattaagtcttaaagatttcacagcatcgatagctcattcattttatgttttttggcaacatatctttgtgagtgtcaaaggtggtcttgatttagttctccctaaagctgtctattagccacttaggctaatatatttcatgtacttctacataattcccatctctgtttggcaacagacatagcttttgatctgctgactttcattcactttcttttcaggttgctttgcttttgatcatttgaatgttctcatcgagcctgctgttcatgatatatttgctaggattcctggttatggttttgtgcacaccttctatattcaagatgcaaggttttgtgctaggattcctcagcacttggagtggtaactgtcatccatggtaacattacacttggagtttatataacccttaaaatgcatatatgaggtgagatcttttgcaatggaaaagcaatgccaggaaaagtatttgatgtcctaaatgacgtacttgttgatcagggttctgatccatacctgcccaaaattgaatgctacgagcataaccatctaatcacaaaggtaagattcagagggtattaaaaaagtacatctcttgtagcataaatccaccttttctgtttggatatttagtggatggaatcatgaaggtaggcccatttctcaattcttttaagcttgacagagtttaggcgacagctgcactgaaatagagaagccataactatgttttttgctactgttcatatgataaaaaacatattgcattatgttcatatttctctaagctgaattgtccttcacaatttcataactcattgtgtcacttgattgcctgaagcaagtgttggttggaactaatgattaaatactaatgtagacacacttcttggagcttatttttgttattttattcctgtatttgtttataagttcaggatttttaatattattttagatatgtactaaaaacttctatttttttaatatgatgagaatatttctaggttgaaggagatgggggtgatagtagctataccgactggcagtacagcatactctggtgcagctggaggctcaatggtaggctaattcttacaagttgtagaaatcctcagaagcactaaattaccccatgttaagtgataaatgaccatgaaaaaaagcattttcccgtgttattaaataagatctgtttcctctattgctttccgctccatgttatgtatagatatttctcattgatgatgcacatgcttaatattttcagggaagatttttacatgaaaatacgacattattttatataaatatgacttctctctaataatgcatcctgtacatgttcaaagaggaacatatgaaaaggctagttgtgccgctttccactctataccagtgaaatagttcctggaaccatcttgctaaacttcaaagaagcatgcccagcatttactttaagaataattgtaacagccaatctccaaggtcaatgagctaaatatcattttctttcttcttaactatttcatcggaaatatttaatattgaacattgttactgcattgaaaatacttatcatttttggcgctcttgtataatccattttgatttctgaaaactgagcaaggataaatgatgggtagatttgttgcttttatggtggtcatgtactcttgtttgttgtttcattcaaatacattgtgttcgatatgcaatcacataatgtgtgtttattagtctttttatatctgccatggaaatgtttcatttccaagcacgctacccagtgccaattgaacaggacagttattcactatgatcattgttgctcttgttatctaggtccatccaaatgccccatgtttgctgtttactccaatctgcccgcactcattgtcatttag</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0189900, RefSeq:Os11g0189900