Os11g0200600

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Revision as of 09:03, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0200600| Description = Cyclin-like F-box domain containing protein| Version = NM_001189476.1 GI:297728082 GeneID:9269367| Length = 3971 bp|...")
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Gene Name

Os11g0200600

Description

Cyclin-like F-box domain containing protein

Version

NM_001189476.1 GI:297728082 GeneID:9269367

Length

3971 bp

Definition

Oryza sativa Japonica Group Os11g0200600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:5043193..5047163

Sequence Coding Region

5043430..5044464,5044931..5045086,5045172..5045351,5046832..5046843

Expression

GEO Profiles:Os11g0200600

Genome Context

<gbrowseImage1> name=NC_008404:5043193..5047163 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:5043193..5047163 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctacgaggcgcgacggcagcagcagacgcgagggactcacggccgaggaggacggcggcgaggactggcttagcaccctcccggacgagatcctccacaatgtcctctccttcctgccagcgcacgaggccgtgtggacgtgcgtgctctcccgccgctggcgcaacctctggaggtccgcccccgtcctgcgcatcagaaacgcaaagagatggggtggtatggctaagttcgacaagtttttcaacaatctactgctcttgcgcgacccggtgcctcttgatgagctcgagttccaaaccgtattgggcatttgcaagttgcatccactacaaccttctttccgcttgcttaagtacgctaacacatggatcaggcatgcgctaatgtgcaatgttcgggttctcagagtcctcgttcaatatcaatatgatctacccctgctgaaagtcaacatgcctctcatctctgaacacttaaagaccttagagcttaggcgtgtactgctggacaagcgtgctctggatttctcaagctgtccttcactggaggaacttgagatgaatttttgtgggaattccaccaccaacaagattttctcacagtcactgaagcgtctttgcatcaccgatggtcggtttactgacgatctgtcaagcttacctgcattgcaagaccttgagatggaatcatgtggaatttgcaccgagaagttggtgtgccagtcactaaagcatctctgcttcactcgatgccacttcgaggagcccacacatatttctgccccaggtcttatttcgctacagctgaatgatatatggggctggactccttcacttgaaaccttgccattgctagtaacagcatctgtcaagcttgggaaagagtcaatgggttgctgttcggaatgcacatttcatcctggtacatgtgctgattgtgatggtgatcctgatagcagtttcaagtgtgagtttctcagagatctgtccaatgctgtgaatttggagttagcagctgaagatggaatgtgtatgttcaaacaagacttgacatggtgccccagattcagcaaggtaaagactttgcttcttgatgggtgggttgttgggcatgatttctatgctgttgtttgctttctccaacacacaccaattctggagaagctcacccttcagctttgtgagggacatgaacgtatggtggaaattgaagaaagtagcagatcagtgggacgtatggttcagtttgagcaccttcaaacagtcgaagtcagatgtttaaggaatgatgaatgggttcacaagattttgaaaatcttgaatacctatgggattactccagacaaaatcaccatccagatccaggattcagtctga</cdnaseq>

Protein Sequence

<aaseq>MATRRDGSSRREGLTAEEDGGEDWLSTLPDEILHNVLSFLPAHE AVWTCVLSRRWRNLWRSAPVLRIRNAKRWGGMAKFDKFFNNLLLLRDPVPLDELEFQT VLGICKLHPLQPSFRLLKYANTWIRHALMCNVRVLRVLVQYQYDLPLLKVNMPLISEH LKTLELRRVLLDKRALDFSSCPSLEELEMNFCGNSTTNKIFSQSLKRLCITDGRFTDD LSSLPALQDLEMESCGICTEKLVCQSLKHLCFTRCHFEEPTHISAPGLISLQLNDIWG WTPSLETLPLLVTASVKLGKESMGCCSECTFHPGTCADCDGDPDSSFKCEFLRDLSNA VNLELAAEDGMCMFKQDLTWCPRFSKVKTLLLDGWVVGHDFYAVVCFLQHTPILEKLT LQLCEGHERMVEIEESSRSVGRMVQFEHLQTVEVRCLRNDEWVHKILKILNTYGITPD KITIQIQDSV</aaseq>

Gene Sequence

<dnaseqindica>238..1272#1739..1894#1980..2159#3640..3651#gtacacttcacactgccatccgctccatcgaccagcggtggccggcgacgccgccacggtgctcgtcccctaccagaagcggcggcggccggagcgacggagagcgtgtgttccggcgactgagttgaggtgagtgtgtcttctcgtttcttctctgtgttccgtgatgagttttttttggcgtctcacctctctctgctctggcgcaggaggggcgctcgccacctgttcgacggaatggctacgaggcgcgacggcagcagcagacgcgagggactcacggccgaggaggacggcggcgaggactggcttagcaccctcccggacgagatcctccacaatgtcctctccttcctgccagcgcacgaggccgtgtggacgtgcgtgctctcccgccgctggcgcaacctctggaggtccgcccccgtcctgcgcatcagaaacgcaaagagatggggtggtatggctaagttcgacaagtttttcaacaatctactgctcttgcgcgacccggtgcctcttgatgagctcgagttccaaaccgtattgggcatttgcaagttgcatccactacaaccttctttccgcttgcttaagtacgctaacacatggatcaggcatgcgctaatgtgcaatgttcgggttctcagagtcctcgttcaatatcaatatgatctacccctgctgaaagtcaacatgcctctcatctctgaacacttaaagaccttagagcttaggcgtgtactgctggacaagcgtgctctggatttctcaagctgtccttcactggaggaacttgagatgaatttttgtgggaattccaccaccaacaagattttctcacagtcactgaagcgtctttgcatcaccgatggtcggtttactgacgatctgtcaagcttacctgcattgcaagaccttgagatggaatcatgtggaatttgcaccgagaagttggtgtgccagtcactaaagcatctctgcttcactcgatgccacttcgaggagcccacacatatttctgccccaggtcttatttcgctacagctgaatgatatatggggctggactccttcacttgaaaccttgccattgctagtaacagcatctgtcaagcttgggaaagagtcaatgggttgctgttcggaatgcacatttcatcctggtacatgtgctgattgtgatggtgatcctgatagcagtttcaagtgtgagtttctcagagatctgtccaatgctgtgaatttggagttagcagctgaagatggaatggtacattcgtgttcatttctgacttgtcttccagccaatttttgtcattcatactatcaaacactacatattcattagctttatatttaaacagaattctatgtgttaccatggatttctgttctgccttaccatgtttcaatgaggacatcctgaacgttggtttgtgggggtgggcggggtgaactattgaattatatggttttgaagcttgtgacatcaatatgttttctagaacttgaaaatagttcgatttgttgtgagctctgtataacttcaaccagtatcgttaacacaagaatatttctttgtcaacacaagaatatttctttcagtaaagagaaccttataaatcaagtagtgatctattggcatgtctccttatgtcttcattttgctctagtgttctgtctaatgtccatacctttgtatgttaaaatgatatattccatcttactttgcacagtgtatgttcaaacaagacttgacatggtgccccagattcagcaaggtaaagactttgcttcttgatgggtgggttgttgggcatgatttctatgctgttgtttgctttctccaacacacaccaattctggagaagctcacccttcagctttgtgaggtatatacattctaatgtgatagtgatggcttatcaaagttatcatgcatgattgattgagctgagttttttttttcttccatagggacatgaacgtatggtggaaattgaagaaagtagcagatcagtgggacgtatggttcagtttgagcaccttcaaacagtcgaagtcagatgtttaaggaatgatgaatgggttcacaagattttgaaaatcttgaatacctatgggattactccagacaaaatcaccatccagatccaggtttgagatgactcaaaatccatcctacatatccaatctacctacttctctcattactatatttatttataactagaggcattggatgaaaatgaaaaggtttaaatggcccatatgagtgaagaaaattttatgtaaagtaatatgcatttattttaattacaactgtcgttcactattgtatctatagatgtcatgtggggactacatatgactggagaccagtaggtgctgtgagagatgtatcagcaacagttttggcagtggagagtatagttaagcgttctgattgcagttcttatagatagatttgtgcctagtgagtttgtaacgagaattggagatgtgtacactgattgactttgattgtatccattctggtttttagagtactagtagtttattaggaagttgaacaaataaatgaatcattggcgacttgagtacatccctcctgaactggcccgtactttggcattcattatacctatactttcaacatcatactcttcaatgattctgttaggaagaaacacagctcatttagttctcgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaagtagcagatcagtggacgtatgttcagttgagcacttcaaacagtcgaagtcagatgttaaggaatgatgaatggttcacaagattttgaaaatcttgaatacctatgggattactccagacaaaatcaccattccagatccaggttgaagatgactcaaattcccatcctaacatatccaatctacctacttctctcattactatattatttataacctagaggcattggatgaaaatgaaaaggtttaaatggcccatatgagtgaagaaaattttatgtaaagtaatatgcatttattttaattacaactgtcgttcactattgtatctatagatgtcatgtggggactacatatgactggagaccagtaggtgctgtgagagatgtatcagcaacagttttggcagtggagagtatagttaagcgttctgattgcagttcttatagatagatttgtgcctagtgagtttgtaacgagaattggagatgtgtacactgattgactttgattgtatccattctggtttttagagtactagtagtttattaggaagttgaacaaataaatgaatcattggcgacttgagtacatccctcctgaactggcccgtactttggcattcattatacctatactttcaacatcatactcttcaatgattctgttaggagaaaacacagctcatttagttctcgggagcaagtgataatttctacagtatatacttttatcaactgcaaagtcccttatcatgcaattcaatgttttttaatatatgccaaaggatatctgaactaatatgctcttcgtgcttgtgtaggattcagtctgagaagttcagagatctagcagatgattgatcgagctgacgacgtccatgctgaagtccttatctgaattctgaaagtgtgtgctttgggtctgcaagaattaatactaacactgttgcttgctgaagctcatagaaatacagctttgatcgaattggttacagaaaactagcacacggtacttctcaattggttatcatactggttgttaaaacttatctcgactagctagtttgtttgtttacgatacggttttcgttgccgactcggacagagactcatgtgtccctttgtagtttgtatatccatgtgagatttctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0200600, RefSeq:Os11g0200600