Os11g0201600

From RiceWiki
Revision as of 09:03, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0201600| Description = Cyclin-like F-box domain containing protein| Version = NM_001189482.1 GI:297728094 GeneID:9268819| Length = 2228 bp|...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os11g0201600

Description

Cyclin-like F-box domain containing protein

Version

NM_001189482.1 GI:297728094 GeneID:9268819

Length

2228 bp

Definition

Oryza sativa Japonica Group Os11g0201600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:5118568..5120795

Sequence Coding Region

5118568..5118784,5119227..5119396,5119499..5119654,5119799..5119927,5120307..5120795

Expression

GEO Profiles:Os11g0201600

Genome Context

<gbrowseImage1> name=NC_008404:5118568..5120795 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:5118568..5120795 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctccgacacggggcgggagcaagagagcttgcgtggggagcggcggtggcggcgaccggatcagcgacctccccgacgaggtaatccaccgcgtgctgtggttcctcccgacccacgaggctgtgaagacgagcttgctgtccaggcgctggcgcgagctctggaagtccacccgtcgcctgagcatcgcgggcttatcgaggtctccccatcttcttagtaccaccggcagtggggggagctcgccggccactgtggacaagctgagcaagttcgtcaaccacctgctgctcagccgaaagcagggtcctctggatgagtgcaggttcagctttgatggtttcaaggacatggatggtgcccaagtcgacatgtggatccgatatgttctggacaatgtgtggcagcttcgagtgctactgatcaatcttggaaccagcattcacgttaagcttgcaggcacgcctctcgtttcggagaacttggacaattatgatgcactatgtggtctgtgtgcgaactgccgtgataatgacaacatcagtggtacctgtctgcttctcaggggtttgtcaagatgcacatatttggaattgtcaccttcctatcagatgttgacctttgaaagggatctaagatggtgccccacatttagtaatttaagaacgttggtactcagtgattataatttggacggtggcttccatgcactactttgctttcttcagcagacacctgttgtacagaagctcacacttaaactccgtaagatacatggccctactgtggatatatccagctatctcaaaagaccagttgtactgcggcatcttaggatagttgaagttaaatgcccagtatctgttcaagaagagattttcaaactttggaagatcttgattacctgggggagatatattgtgcaatttaatatcgaaagtacacattacagattagattggacaatcaaaatgccaaaattatctggcagattagcgaaacagcacaggagtatggccaaggaggcaaggagtaccacccctgtgttcatgtgttgctatgctcacatagattgcagtgggcaggcctctggggtgcagcgccttcgattatcagttaggggagaaacttcggacaagaatgtattggttgagtag</cdnaseq>

Protein Sequence

<aaseq>MAPTRGGSKRACVGSGGGGDRISDLPDEVIHRVLWFLPTHEAVK TSLLSRRWRELWKSTRRLSIAGLSRSPHLLSTTGSGGSSPATVDKLSKFVNHLLLSRK QGPLDECRFSFDGFKDMDGAQVDMWIRYVLDNVWQLRVLLINLGTSIHVKLAGTPLVS ENLDNYDALCGLCANCRDNDNISGTCLLLRGLSRCTYLELSPSYQMLTFERDLRWCPT FSNLRTLVLSDYNLDGGFHALLCFLQQTPVVQKLTLKLRKIHGPTVDISSYLKRPVVL RHLRIVEVKCPVSVQEEIFKLWKILITWGRYIVQFNIESTHYRLDWTIKMPKLSGRLA KQHRSMAKEARSTTPVFMCCYAHIDCSGQASGVQRLRLSVRGETSDKNVLVE</aaseq>

Gene Sequence

<dnaseqindica>2012..2228#1400..1569#1142..1297#869..997#1..489#atggctccgacacggggcgggagcaagagagcttgcgtggggagcggcggtggcggcgaccggatcagcgacctccccgacgaggtaatccaccgcgtgctgtggttcctcccgacccacgaggctgtgaagacgagcttgctgtccaggcgctggcgcgagctctggaagtccacccgtcgcctgagcatcgcgggcttatcgaggtctccccatcttcttagtaccaccggcagtggggggagctcgccggccactgtggacaagctgagcaagttcgtcaaccacctgctgctcagccgaaagcagggtcctctggatgagtgcaggttcagctttgatggtttcaaggacatggatggtgcccaagtcgacatgtggatccgatatgttctggacaatgtgtggcagcttcgagtgctactgatcaatcttggaaccagcattcacgttaagcttgcaggcacgcctctcgtttcggagaacttggtgagattggagcttagcgaggcaaagttcaagggcaaatttctggatttctcgtgctgtgcgggcgttagaatatctgaagttgcgtgcttgctttatcagtgttggcaagatcttctcccaatctttatcagtgttggtattaaatgattgtgatggtcaaacacccctccttgaaagcatgccatctttagaaagagcatttgtcaggcttggatggtttgctgtggaccactgtactgaaggtatttgtggggaatgtcatcgtccatgtgaaaactcttgtgataatgacaacaacagttctgaaaacaacagtagtgacaatggcaacagttctgataacaatagtagtgataacggcaactgttctgatcaggacaattatgatgcactatgtggtctgtgtgcgaactgccgtgataatgacaacatcagtggtacctgtctgcttctcaggggtttgtcaagatgcacatatttggaattgtcaccttcctatcagatggtatgtatggtagcaattgcttccacctctattcatacatgtgatcttctttctatacttaatacttgtgttcatttttgctgttgttgcatccgatactagtacaaatattgaactgatttcacttctttgcactttcttcagttgacctttgaaagggatctaagatggtgccccacatttagtaatttaagaacgttggtactcagtgattataatttggacggtggcttccatgcactactttgctttcttcagcagacacctgttgtacagaagctcacacttaaactccgtaaggtatgtatgtgccatatacaccttccaaataagataggaattggtgttaccttgtatatcacacgcataattgatctgtatagaatattttgtttggaacagatacatggccctactgtggatatatccagctatctcaaaagaccagttgtactgcggcatcttaggatagttgaagttaaatgcccagtatctgttcaagaagagattttcaaactttggaagatcttgattacctgggggagatatattgtgcaatttaatatcgaaaggttaatttgacatttgagccatgattccattgtaaggtaattagttgctcgctctcgtgaaccttgttttttctgcaactgccctatgtttagatatacccaagcaatgaagaaactatatacttaatctaaatgtaaaggtaaaaaatttagaaacattatacaccagatttttcattttagtgacattggaaagcagattgagttgagacaacattttcttaaatttaattatgatgtgcagtcagtcctttctatctccggtggtttgagttaacagattggtatatatgaaaatatgtggatttagagaaaagacaaatatcaatgtgaatatgaaattgcattcaggaaaagtcacgaccaaatatcttgacaacactaccatcactctttccatccatccgtccatctttagcagcagttgtgttttatgtgacagtacacattacagattagattggacaatcaaaatgccaaaattatctggcagattagcgaaacagcacaggagtatggccaaggaggcaaggagtaccacccctgtgttcatgtgttgctatgctcacatagattgcagtgggcaggcctctggggtgcagcgccttcgattatcagttaggggagaaacttcggacaagaatgtattggttgagtag</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0201600, RefSeq:Os11g0201600