Os11g0202000

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Revision as of 09:03, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0202000| Description = Cyclin-like F-box domain containing protein| Version = NM_001073975.1 GI:115484598 GeneID:4350009| Length = 3257 bp|...")
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Gene Name

Os11g0202000

Description

Cyclin-like F-box domain containing protein

Version

NM_001073975.1 GI:115484598 GeneID:4350009

Length

3257 bp

Definition

Oryza sativa Japonica Group Os11g0202000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:5136024..5139280

Sequence Coding Region

5136251..5136393,5137463..5137616,5137707..5137868,5138055..5138957

Expression

GEO Profiles:Os11g0202000

Genome Context

<gbrowseImage1> name=NC_008404:5136024..5139280 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:5136024..5139280 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcctacggggaaggaggggatggaagagcctttgccgaccgacgccgaccacattggggctctcccggacacagtgctccaccacgttctctccttcctgccgtcgcaggatgccgtgaggacgtgcgtgctcgccaagcggtggctcgacctctggaagtctgtcacggcattgcgcattggtgaccgtgacaagaggaagctgtggaccgtgaagggtctccaggggttcgtggaccattttctgctgctccgtgaaagtgtgcctctccacacatgtgtgctcaggttcatcgtgttcagcgaagacctcaacgagacatcccggctaaacctctggattaagcatgctctgctgcgtatggttcagtttctccaggtctccatccggcagaatacagccttctatcaccagattaatctaggcatcctgccttttgtttcacggcacttgtcgatgcttgagcttcacggtgtacggatggtgggaagtttccttgatttctccagatgcccggctttgcaacatctagaatttgaccgctgtgagttgccatgtgacaagatcttatcagagtccctaaaacttctgcgcatcactcgctgcaaattcagtcaaacatcacgggttcgtatttgtgtcccaagtcttgtttcactgcggcttgatgatttttatcgccgtactccagtgcttgagaggatgccatcattagttgaggcatttgtcagagttgtccacaggacttatgattgttgtgggtatgattatattaactccggtgattgtggtaatgagcactgtaagtcatgtcatggcatcaaggacgacaacaattgtgttcttctggatggtttatcagaagctaagactttggcattgattgatggaaccatatcgtttattttcaatagggatttaaaatggtgccctacatttagcaagttaaagactttattactcaatgaatactggtgtgtgcctgatgagtttagtgcactagcctgcattcttgaacatgcaccagttctagagaatctcattcttcagctctattccgagggtcctaagcatacaatgaaaatcaaaggaaactgtcatccaatggatagatcagctgcaatatcaggacaccttgagacagttgaaatcagatgtgaagtggttgataagagagtactcaaagttttgaagtacctgtctacatttaacatacttttcagttttgagcaagtcaagatttctgaagaagatgacagtgatgacaatgaccaagaggatgaggaagatgatgatgacgacttttatggagaggaggaggaagaggaagaagaggatgacgaagatgaagatgattga</cdnaseq>

Protein Sequence

<aaseq>MPTGKEGMEEPLPTDADHIGALPDTVLHHVLSFLPSQDAVRTCV LAKRWLDLWKSVTALRIGDRDKRKLWTVKGLQGFVDHFLLLRESVPLHTCVLRFIVFS EDLNETSRLNLWIKHALLRMVQFLQVSIRQNTAFYHQINLGILPFVSRHLSMLELHGV RMVGSFLDFSRCPALQHLEFDRCELPCDKILSESLKLLRITRCKFSQTSRVRICVPSL VSLRLDDFYRRTPVLERMPSLVEAFVRVVHRTYDCCGYDYINSGDCGNEHCKSCHGIK DDNNCVLLDGLSEAKTLALIDGTISFIFNRDLKWCPTFSKLKTLLLNEYWCVPDEFSA LACILEHAPVLENLILQLYSEGPKHTMKIKGNCHPMDRSAAISGHLETVEIRCEVVDK RVLKVLKYLSTFNILFSFEQVKISEEDDSDDNDQEDEEDDDDDFYGEEEEEEEEDDED EDD</aaseq>

Gene Sequence

<dnaseqindica>2888..3030#1665..1818#1413..1574#324..1226#gcgctcctcccgattcttccattccacggtgatccctcgcctggttctcctccatccgcgcgatccgatcgcctcgaacccagcgagcgtcgccgccgttggtagcgggccgtgctgcgtctccctgctgctgctgctgctgtaactccggccggtggagacggtgccggcggcgaggcgaggcgaggtgctctgtggctgtgcccgcactggcgaggcgtcctccgtgtttcagcctcttcgggccatccacgcccccttcttcagtcgtctgatcggtttctgtttcgcagagcgctaacgcccgtggcctgttcgacgaaatgcctacggggaaggaggggatggaagagcctttgccgaccgacgccgaccacattggggctctcccggacacagtgctccaccacgttctctccttcctgccgtcgcaggatgccgtgaggacgtgcgtgctcgccaagcggtggctcgacctctggaagtctgtcacggcattgcgcattggtgaccgtgacaagaggaagctgtggaccgtgaagggtctccaggggttcgtggaccattttctgctgctccgtgaaagtgtgcctctccacacatgtgtgctcaggttcatcgtgttcagcgaagacctcaacgagacatcccggctaaacctctggattaagcatgctctgctgcgtatggttcagtttctccaggtctccatccggcagaatacagccttctatcaccagattaatctaggcatcctgccttttgtttcacggcacttgtcgatgcttgagcttcacggtgtacggatggtgggaagtttccttgatttctccagatgcccggctttgcaacatctagaatttgaccgctgtgagttgccatgtgacaagatcttatcagagtccctaaaacttctgcgcatcactcgctgcaaattcagtcaaacatcacgggttcgtatttgtgtcccaagtcttgtttcactgcggcttgatgatttttatcgccgtactccagtgcttgagaggatgccatcattagttgaggcatttgtcagagttgtccacaggacttatgattgttgtgggtatgattatattaactccggtgattgtggtaatgagcactgtaagtcatgtcatggcatcaaggacgacaacaattgtgttcttctggatggtttatcagaagctaagactttggcattgattgatggaaccatatcggtatgcttgcatgttaattcaattatatttcccattatttctattgttgtttctatatcaacatctggatgttcatgaagatgtcttttgaattatcttattcacatccattctagtcaattattgtcttttgaattatcttattcagtatgagacttgtttatcctttctttttctattgtccagtttattttcaatagggatttaaaatggtgccctacatttagcaagttaaagactttattactcaatgaatactggtgtgtgcctgatgagtttagtgcactagcctgcattcttgaacatgcaccagttctagagaatctcattcttcagctctattccgaggtataccttctctaattggacaactagtaccttgttgaagtcattaaacattttttttatattagaaaaaaatgtttgtatttctggcagggtcctaagcatacaatgaaaatcaaaggaaactgtcatccaatggatagatcagctgcaatatcaggacaccttgagacagttgaaatcagatgtgaagtggttgataagagagtactcaaagttttgaagtacctgtctacatttaacatacgtaaataacatacttcattctttctatatttcagaatttttcctttaccttcatatgcatgaaacataagaagcagtattccaactattagatggaaatgtatgctatgaacagggtaaatgggaaatgaaagcatgctctgtatttgatctcattggaagacattatctaatgtaccattttggttggttcttggtagtatccacaagctatacaaatacttcttaaaattttcttgcatcacataaccaatatgacatgtttgtaatatgtttttaattatatgtttcaaacatttgattgattttgtttcccatcagttatatatttttgagatatcgatgctgtcgtcttgaattccagtttattacttgttgtcttgctcttacaactcgctcgcatgtcatttaccatgtgaacaaagtacctcataggctgcttatctccttttcaaattctactaatgtgagaaaaatactattcttctatagtgctaaagcttaccctaccagaggtgtcgagtatgccagacggctgcactttgccatcttgctagtcagagcagctagttatgattgccaataattagatatgattgcttagcttttttttgtttggccaagatatctcaatgtttttttggcatcaccatattatatttgtgagaccacagcgtatgtctaatgaagtctggagtgtaagcatctttgtttactaattaccagaattatcatgttatagtccgtggaccatgtcgttttctttattatcatgtgctaggctatagagaatccatcaactctgcagtataggatgcaaccatgctgtaaagggccagtgcattctctaagggagggcattttattatgtttctcttctttgaataagtagtggatataatcagattttattgctggagaaatagtgaagtagttatgtcaatttgtattttgaagaactgatccaatggactaaatttgtcaatgaatttgaagttctctttttgaagtaattataactttaagtgaatttgtgaatggagcttacaacgcttttcatattcatgcagttttcagttttgagcaagtcaagatttctgaagaagatgacagtgatgacaatgaccaagaggatgaggaagatgatgatgacgacttttatggagaggaggaggaagaggaagaagaggatgacgaagatgaagatgattgatgcaccaccttttgattattcagaaggttgacaccacaaggatgataacatgatgtgtttttctccgtgagtagcctgaagggcagacttctggattcgtaactggttgctattagggatggcaatggtacctgtttgtcagtttacccataggtgaaaactctattggagttagatatgttcggagaatgctttgcattttagtgcctatgggttcttattggatc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0202000, RefSeq:Os11g0202000