Os11g0205200
| Gene Name |
Os11g0205200 |
|---|---|
| Description |
Integrase, catalytic region domain containing protein |
| Version |
NM_001189489.1 GI:297728108 GeneID:9268857 |
| Length |
14450 bp |
| Definition |
Oryza sativa Japonica Group Os11g0205200, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 11:5280104..5294553 |
| Sequence Coding Region |
5280104..5280123,5280464..5281205,5281495..5281820,5283691..5284192,5284260..5284354 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008404:5280104..5294553 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008404:5280104..5294553 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggagctcacttcggagcaagagcaactcatccaccgcaatgcccaagcttccaatgcaattctctccgccttgagttcggatgagttcaacaaggttgatggacttgagaaggccaaggagatgtgggataatttgcaattggctcatgagggatctcccgccgttcgtgaggccaagattgaattattggaaggaaggcttggaagatttgtgatggatgataaggagacatcacaacagatgtatgataggatgatgatccttgtcaacaagattaaaggacttgggagtgtggacatgacaaatcactttgtggtcaagagacttctctgtgcatttggtccaagaaatcccactcttgtatcaatgatacaggaaatgaaagacttcaagagactcaccccaagtgatattcttggaagaattgtgtctcatgagatgcaagaagaggaagctcgtgaagtgagacaaatggtgaagaatgccaccatgataaaaaatcaagaagttgctttgaagaagaaaagaaaccttgccttagaggagagcttagctaaagaatgtgctaaaaatgaacaacttgctaatgagcttaatttggctaatggttctttagctagccttagggatgtcaatgaaactcttcaagaaaaatttgttaatttagacaaaagtcataaagatcttgaagttcaatttgacactctttggaatagcacctctcaaccaaatgtggtttctaattcttctaacccttctactagcaatggttatgctaggtgttacaatattgatttgaactcttgtggtactaatattgatgctatgcaagctcttaagaaagagaatgaaaggttgggcacattggtgaaatatggatgcatgaagacataccattcaaaagatgccctttacaagaccatcaccgctcatcctaacaaggatggacacgggctcgggttttcgggtggaagtcctgtgtctaagcgcgtgatggtaaatgggaaagaatgcttgatgtttgtgagagaaggtaaagcaccacaagaaagtgaggtgactagtcttgtgaactgccagggacccggaacatccggacagaccgggagaaacctccgggtgggaatctctgtctctcaaaaattcccactaggaagttccggccgttttgccaggaagttccgggccaatggccatgcacaagacatgaccggaagttccgggcacaaagccaggaggttccggccagagggtctttactatgattcatatgtaatttccaaaaattcagagggcaaagtggttgcctattttaatggaaattacaatgatgagtaccgcacttgtgtgtgggtgccaaaggctttggcatactcctccggtggttcaagttgggttgtggacagtggttgcactaatcatatgactggagagagaagtatgtttacaagtcttgatgaggagagcggaactcgtgagaatattgtgtttggagatgatggtaaaggaaagttgggttataattgcttgtttaccgatgaggatgtgaccgtctttagaagggatgactcctccgttgcattcaaaggcaagttgaagggtgatctctatctggtcgatttcgatgtggatagagtgaatccggaagcttgtttgattgctaaatcttccatgggttggctatggcatcatagactagcccatgttggaatgcggaatttggcaactcttctaaagggggaacacatcctcgggctcactaatgtcacatttgagaaagattatgtgtgtagtgcttgccaagcctggaaacaagttgggaatccacatcctatcaagaacatcatgactacaacacgccctcttgagcttctacatatggatttattcgggcccgtggcctacataagtattggaggtaacaagtatggttttgtcattgttgataatttttcccgctttacttgggtgtattttctccatgacaagagtgaggctcaagatgtcttcaagcgcttcgccaagcaaggccaaaacctctataatctcaccatcaagaggagggaatcaagcacgagttctccacccccctatgatcctcctcaaaatggcattgttgagaggaagaaccaaactcttattgaagccgcaagagcaatgcttgatgagtacaagacttcggatatcttttgggcggagaccgtgagcaccgcatgccatgccatcaatcgcctctacctccacaaaatcctaaagaaaacttcatatgagctcttgagtggtaagaagccaaatgtttcatattttcgtgtctttgggagtaaatgcttcattttgagtaagaggcctcgttcatctaagttctcacgtaaggtggacgagggattcttacttggctatgagtcaaatgcacatgcctaccatgtcttcaacaaaacctccagtattgttgaagttacaagggatgtgacatttgacgaatctaatggctcccaaggagagcaagttgttgtacatgttgtagatgatgcggatcctagacaagcaattgattctaaggctattggagacatacgaccagtcaagacgcaggatgacgaagaagatagggatcaaccttcgtcatcgacatccaatagccctacaacaagtcaagagtcagttgacccggaagttccgggaccagatgattggaacctccggacctccccaggcccggaagttctgggtccatctgctaggaagttccaggcaaaggatagtcaaggcgtgcctacggcacaagtggatgggattgatgccgagggcactgtagagcatcctgatcgggctcatgtcccctcggtgcaccatccaagaatacatcacattgtccaaagagatcatcccgtcgacaacatacttggtgatataagaaaggggctgcagcgcgggaacgccatcatctccatgtcgcggttcgacatcaactccctgatggaggctgtgcagaggcaccgcgtcacgcacctgttctgcgtgccgccggtcattatcgcgctcaccaagcacgggagggcagctgccattgacacggtgggagaatgggacaccggtgtcgaggctggcgaggagcagctccgcgacgtcacaactctccaccatcgcccactatgtactatgactcgtgagaaaagacagaaagcctctcaggatgtgtccggtgatgagagtcctcctattcggtatactcgtggtcgtttgggtaaagagaaagtggttgagggcggcagtggcagtggcactcgtacttctcctagatttacaaggcaatccagtaaccgtcctgttcagattagggatgttgacagtggtcaagtgatgcccctaatacaagaggtcgcgggagaggtggtggtcgcagttctggggctggaagggcatctcatgatttccctagaaaatccaatggttgagatgaagtggattgattgggcttacatgaggaagaagaacaatgaagtgttcaaccaagtgatgcaagtgtgccacaacaagaatcttggagatattcttgccttggagtatgattggaatgaggaggtcattgcacagttctatgcaacaacattctttggtactacaaggaagggaaccccatatgtgaagtggttgactgagggtgttaggcacaagatttccatggtgcagtttgctgagatgttggggttagatgatgaggatctcaataggcccaacattcatagtgaagcacccctccccatgatcaagaccaagttcatgtatgcaaagaatgctcctaggacttggatgggatttactcatggttggaaatgctactgccttgccatccaagcatgctcatcttctcagtcgcatgcgctacaattagcctcccttaagtgtgatgaagttgatttgatgattgagacagtcaccggggtgttctacatcaaagatgggcgccacaatccttttcgccctcatgctccaccttccttttctccagtggtacctagatccattccttctaccttagctggtccttcttctagtgccccaccgagttcctcgagttcttctcccatcaagaaggcacttcaggcaattttctgtatgtgtgctaagactgccaagaaagtgaagaagatcgaaaggcgtcagaaggaagatagaagagaggctgggaaagaagtgtcagatgattctaaggatgaggtctatgttgatccatttgaggcttatgaggcagcccgcaacgttgccggtgaaggtccatccacctacttcaatgaagaatcttcccattctgatgatgatgatggtggtgatgagggtgacaccgaggcagccgctgaggatgctcccactgatgttgatgagggtgacaccgctgctcagtccgacaagtctcatctctccgttatggagcatcttggaagctcatgcattgtgcgtgggagaggcaagaacaagaggatttggacgtactttgaggatgaggagctgatcaaggcattgttcgagattgctttagatccaagctggaaatcagaagggggtttcaaaaatggatactgccaagttctagagaacgtgcttgctaagaagttgccaagttctggccttactgctgttccgaccaagtttggcacaattgaagtgatgctaaccaaaagtggcttttcttgggatgacaatagaaagatgatacaatgtgagaaacaacaatacgatgatcattgcaggaaaaacaatgaggcaaagggtctatatggtgtagcattccctcactatgatacactagctgcaatttatggtaaagacattgctactagagaaggtgcagagggtcttggtgaggctgttgctaatatggagaaagaaattgttcaagatattcaagatgaagaagataaggaggatgaagagagagtgtctagagaaacgcctcggcggagcatcgatttagctgcacctcgacggagcatcgattcagccgcacctcgacggagcatcgattcagccgcacctcgacgaagcatcgattcaactgcttcaagctctaagaagaggaagaaaaacagcaacaaactgaaaaataccttgtcaagtgacccttttatggatgtctttgccaatgttcaaggtgatccgacggatgttacaaagcatgtgggagcaatggtagcatctatgcaacgtgaagctgagatccaagagaaggcaatggctgaggaggacccactacaaaaaattcagaacgaagctattcttgagtgtcaaaagcttggattgactggtactgaagttgtcaatgctgcagctgcttttgtaaaagtgccggctcaaatgagtatgcttatcgctcttccagagtctctcaggagggagtacgtactgaaaatacttgctggtaattcacttgatcaatcttgtagtgttgcaactgcaacaggcaacatatcactttattttgtgatcattaattatgaggcgaagaaaaattga</cdnaseq> |
| Protein Sequence |
<aaseq>MELTSEQEQLIHRNAQASNAILSALSSDEFNKVDGLEKAKEMWD NLQLAHEGSPAVREAKIELLEGRLGRFVMDDKETSQQMYDRMMILVNKIKGLGSVDMT NHFVVKRLLCAFGPRNPTLVSMIQEMKDFKRLTPSDILGRIVSHEMQEEEAREVRQMV KNATMIKNQEVALKKKRNLALEESLAKECAKNEQLANELNLANGSLASLRDVNETLQE KFVNLDKSHKDLEVQFDTLWNSTSQPNVVSNSSNPSTSNGYARCYNIDLNSCGTNIDA MQALKKENERLGTLVKYGCMKTYHSKDALYKTITAHPNKDGHGLGFSGGSPVSKRVMV NGKECLMFVREGKAPQESEVTSLVNCQGPGTSGQTGRNLRVGISVSQKFPLGSSGRFA RKFRANGHAQDMTGSSGHKARRFRPEGLYYDSYVISKNSEGKVVAYFNGNYNDEYRTC VWVPKALAYSSGGSSWVVDSGCTNHMTGERSMFTSLDEESGTRENIVFGDDGKGKLGY NCLFTDEDVTVFRRDDSSVAFKGKLKGDLYLVDFDVDRVNPEACLIAKSSMGWLWHHR LAHVGMRNLATLLKGEHILGLTNVTFEKDYVCSACQAWKQVGNPHPIKNIMTTTRPLE LLHMDLFGPVAYISIGGNKYGFVIVDNFSRFTWVYFLHDKSEAQDVFKRFAKQGQNLY NLTIKRRESSTSSPPPYDPPQNGIVERKNQTLIEAARAMLDEYKTSDIFWAETVSTAC HAINRLYLHKILKKTSYELLSGKKPNVSYFRVFGSKCFILSKRPRSSKFSRKVDEGFL LGYESNAHAYHVFNKTSSIVEVTRDVTFDESNGSQGEQVVVHVVDDADPRQAIDSKAI GDIRPVKTQDDEEDRDQPSSSTSNSPTTSQESVDPEVPGPDDWNLRTSPGPEVLGPSA RKFQAKDSQGVPTAQVDGIDAEGTVEHPDRAHVPSVHHPRIHHIVQRDHPVDNILGDI RKGLQRGNAIISMSRFDINSLMEAVQRHRVTHLFCVPPVIIALTKHGRAAAIDTVGEW DTGVEAGEEQLRDVTTLHHRPLCTMTREKRQKASQDVSGDESPPIRYTRGRLGKEKVV EGGSGSGTRTSPRFTRQSSNRPVQIRDVDSGQVMPLIQEVAGEVVVAVLGLEGHLMIS LENPMVEMKWIDWAYMRKKNNEVFNQVMQVCHNKNLGDILALEYDWNEEVIAQFYATT FFGTTRKGTPYVKWLTEGVRHKISMVQFAEMLGLDDEDLNRPNIHSEAPLPMIKTKFM YAKNAPRTWMGFTHGWKCYCLAIQACSSSQSHALQLASLKCDEVDLMIETVTGVFYIK DGRHNPFRPHAPPSFSPVVPRSIPSTLAGPSSSAPPSSSSSSPIKKALQAIFCMCAKT AKKVKKIERRQKEDRREAGKEVSDDSKDEVYVDPFEAYEAARNVAGEGPSTYFNEESS HSDDDDGGDEGDTEAAAEDAPTDVDEGDTAAQSDKSHLSVMEHLGSSCIVRGRGKNKR IWTYFEDEELIKALFEIALDPSWKSEGGFKNGYCQVLENVLAKKLPSSGLTAVPTKFG TIEVMLTKSGFSWDDNRKMIQCEKQQYDDHCRKNNEAKGLYGVAFPHYDTLAAIYGKD IATREGAEGLGEAVANMEKEIVQDIQDEEDKEDEERVSRETPRRSIDLAAPRRSIDSA APRRSIDSAAPRRSIDSTASSSKKRKKNSNKLKNTLSSDPFMDVFANVQGDPTDVTKH VGAMVASMQREAEIQEKAMAEEDPLQKIQNEAILECQKLGLTGTEVVNAAAAFVKVPA QMSMLIALPESLRREYVLKILAGNSLDQSCSVATATGNISLYFVIINYEAKKN</aaseq> |
| Gene Sequence |
<dnaseqindica>14431..14450#13349..14090#12734..13059#10362..10863#10200..10294#9752..10140#6161..6446#4777..4866#4435..4573#2967..3827#2357..2905#2105..2248#1183..2031#1..522#atggagctcacttcggagcaagagcaactcatccaccgcaatgcccaagcttccaatgcaattctctccgccttgagttcggatgagttcaacaaggttgatggacttgagaaggccaaggagatgtgggataatttgcaattggctcatgagggatctcccgccgttcgtgaggccaagattgaattattggaaggaaggcttggaagatttgtgatggatgataaggagacatcacaacagatgtatgataggatgatgatccttgtcaacaagattaaaggacttgggagtgtggacatgacaaatcactttgtggtcaagagacttctctgtgcatttggtccaagaaatcccactcttgtatcaatgatacaggaaatgaaagacttcaagagactcaccccaagtgatattcttggaagaattgtgtctcatgagatgcaagaagaggaagctcgtgaagtgagacaaatggtgaagaatgccaccatgataaaaaatcaagaagttgctttgaaggtaaaaaaagaagaagattcaagttgtaaagaaagtgaagatgaagagatggcttttattgtcaaaagattcaagcactttctttgcaagagtggctatggcaaagggaggaaggatgatgacaagggaaatatgcaatcaaagagagcttgcttcaattgtggcgaatatggccacttcattgccgattgtcccaagtcaaatgaagctaaggctaagggaggcaagaagaagccggagcgtactcatgtggcggaggcacacatggcagaagtgtggtactccggagatgaagaagatcctgaggtcaagcccaagcccaagtcaaaagacaaggttgaaggagaaggtggtgttgctaccgtcgccttcaagtcatcctcttcaagcaatgagcgtctcttcaacaacttgagtgatgacgacgacgactgctaccactactcttacttcatggcccaaggccgcaagatgatgacttaaaagccctctcaaacttctcttggtgttgattctagtgatgaggaaagtgataatgaattagatgatgtgcttaagagctttagcaaacccgctatgcaacatttggctaagttaatgagagctttggatagtaaagaacaatcactcgaaaggcaagaaaaattgcttattctttagaagaaaagaaaccttgccttagaggagagcttagctaaagaatgtgctaaaaatgaacaacttgctaatgagcttaatttggctaatggttctttagctagccttagggatgtcaatgaaactcttcaagaaaaatttgttaatttagacaaaagtcataaagatcttgaagttcaatttgacactctttggaatagcacctctcaaccaaatgtggtttctaattcttctaacccttctactagcaatggttatgctaggtgttacaatattgatttgaactcttgtggtactaatattgatgctatgcaagctcttaagaaagagaatgaaaggttgggcacattggtgaaatatggatgcatgaagacataccattcaaaagatgccctttacaagaccatcaccgctcatcctaacaaggatggacacgggctcgggttttcgggtggaagtcctgtgtctaagcgcgtgatggtaaatgggaaagaatgcttgatgtttgtgagagaaggtaaagcaccacaagaaagtgaggtgactagtcttgtgaactgccagggacccggaacatccggacagaccgggagaaacctccgggtgggaatctctgtctctcaaaaattcccactaggaagttccggccgttttgccaggaagttccgggccaatggccatgcacaagacatgaccggaagttccgggcacaaagccaggaggttccggccagagggtctttactatgattcatatgtaatttccaaaaattcagagggcaaagtggttgcctattttaatggaaattacaatgatgagtaccgcacttgtgtgtgggtgccaaaggctttggtaactaacatcaagggacccaaacttagacaagtttgggttcctaaatcccaagcttgattttcttgtgtaggcatactcctccggtggttcaagttgggttgtggacagtggttgcactaatcatatgactggagagagaagtatgtttacaagtcttgatgaggagagcggaactcgtgagaatattgtgtttggagatgatggtaaaggaaaggtaattggtctaggtaaaattgccatctccaatgatcaatctctctctaatgtttttcttgtcaattcattaagctacaatttattacctgtttctcaattgtgtaagttgggttataattgcttgtttaccgatgaggatgtgaccgtctttagaagggatgactcctccgttgcattcaaaggcaagttgaagggtgatctctatctggtcgatttcgatgtggatagagtgaatccggaagcttgtttgattgctaaatcttccatgggttggctatggcatcatagactagcccatgttggaatgcggaatttggcaactcttctaaagggggaacacatcctcgggctcactaatgtcacatttgagaaagattatgtgtgtagtgcttgccaagcctggaaacaagttgggaatccacatcctatcaagaacatcatgactacaacacgccctcttgagcttctacatatggatttattcgggcccgtggcctacataagtattggaggtaacaagtatggttttgtcattgttgataatttttcccgctttacttgggtgtattttctccatgacaagagtgaggctcaagatgtcttcaagcgcttcgccaagcaaggccaaaacctctataatctcaccatcaagagggtacgaagtgacagtggaggagaattcaagaacacgcacgtggagtaattccttgatgaagagggaatcaagcacgagttctccacccccctatgatcctcctcaaaatggcattgttgagaggaagaaccaaactcttattgaagccgcaagagcaatgcttgatgagtacaagacttcggatatcttttgggcggagaccgtgagcaccgcatgccatgccatcaatcgcctctacctccacaaaatcctaaagaaaacttcatatgagctcttgagtggtaagaagccaaatgtttcatattttcgtgtctttgggagtaaatgcttcattttgagtaagaggcctcgttcatctaagttctcacgtaaggtggacgagggattcttacttggctatgagtcaaatgcacatgcctaccatgtcttcaacaaaacctccagtattgttgaagttacaagggatgtgacatttgacgaatctaatggctcccaaggagagcaagttgttgtacatgttgtagatgatgcggatcctagacaagcaattgattctaaggctattggagacatacgaccagtcaagacgcaggatgacgaagaagatagggatcaaccttcgtcatcgacatccaatagccctacaacaagtcaagagtcagttgacccggaagttccgggaccagatgattggaacctccggacctccccaggcccggaagttctgggtccatctgctaggaagttccaggcaaaggatagtcaaggcgtgcctacggcacaagtggatgggattgatgccgagggcactgtagagcatcctgatcgggctcatgtcccctcggtgcaccatccaagaatacatcacattgtccaaagagatcatcccgtcgacaacatacttggtgatataagaaagggggtaactactcgttctcgtgtcgctaacttttgtcaacactattcgtttgtctcttctttggaaccaaccagggttgaagatgcacttggtgatctggattaggtgatggctatgcaagaggagtttaataacttcactcgcaaccaagtatggacattggtggagagacccgaccaaaatgtcattggcaccaagtagatcttccgcaacaagcaagatgaacatggagtggttgtaaggaacaaagcccggttagttgcgcaagggttcacccaagtcgagggtctcgattttggtgaaaccttcgcacccgttgctcgccttgagtcaatccgaatgcttttagcctatgtcgctcaccatgatttcaggttatatcaaatggatgttaagagcgcctttctcaatggacccctcttggagttagtctatgtggagcaaccaccggggttcgaggatccaaagttgccaaaccatatgtacaagctccacaaggcgctcaacgggctcaaacaagcccctagagcgctgggagggccccaacgtgttcctctacttcctccccatgttccacatcttcagcctctccgtcatcacatacgcgcagctgcagcgcgggaacgccatcatctccatgtcgcggttcgacatcaactccctgatggaggctgtgcagaggcaccgcgtcacgcacctgttctgcgtgccgccggtcattatcgcgctcaccaagcacgggagggcaggtaagtatgatctcagctctctcaagttaatcggctccggcgccgcgccgctcggcaaggatgtgaggaaattcccggatagtgagattgttcaggtactaattgaactgaacatttgatatttttgcagtgtttactttcataatacatgctgatgaattgttgtttgatccccatttctctcccttgcaattgcgaagcagctgccattgacacggtgggagaatgggacaccggtgtcgaggctggcga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