Os11g0208100

From RiceWiki
Revision as of 09:04, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0208100| Description = Cyclin-like F-box domain containing protein| Version = NM_001074001.1 GI:115484650 GeneID:4350038| Length = 4111 bp|...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os11g0208100

Description

Cyclin-like F-box domain containing protein

Version

NM_001074001.1 GI:115484650 GeneID:4350038

Length

4111 bp

Definition

Oryza sativa Japonica Group Os11g0208100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:5513004..5517114

Sequence Coding Region

5514862..5514899,5515315..5515516,5515611..5515775,5516024..5516929

Expression

GEO Profiles:Os11g0208100

Genome Context

<gbrowseImage1> name=NC_008404:5513004..5517114 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:5513004..5517114 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgccccggattaggagggcgccggcgaggcgagcggcgccggaggaagtgcccgaccgcgtcagcgctctgccggacgaggcgctccacgccgtgctatcgctgctcccggcgcacgacgcggtgcggacgtgcgtgctcgcccggcgctggcgccacctctgggagcacgcgccggcgctccgcgtcaccgacgtcgaggggtggaatccgcggctgcggggcgacggcctcggcaggttcatccgcttcgtggacggcctcttcgtcagccgccgccgccgcgacgcgcctctggagctgtgcgacctggacttcgatttcccggaggacaaggggaaggattggcatgtcaaccgctggatcatgctagccctgttgcgccaccatgcccgggtgctacggatctctttgcccgcgtacatcacgctgcctgatgtgcctctcatctctcagcgcctcaccaggttagagcttgatggtgttcttggcaacgataacattcttgatttctcctgctgcccggcgctgattgctctgaagatgaagtgctgccgtatcaatgccgagaagatgtcatctccatccgttaaaatcttgagccttgcctcctgtgaattttatccagctacccgtactcagatgtcttttccaagtgttgtttcattggagctagatggatgttctggtagcgttcctttccttgaaagcatgccatccttggtagctgcaattgttatatttgatgacgattatgcagacagatgtgacaatagtgtccttggtgactgtggcgacgattcttgcgttgattgctgcaattattctgaccgcagcaaatgcgtttgtctcaatggtttattggaagctacacacttggagttgtcagctgaacctgcaatgtatgttttcaggagggatttaaatttgctcttggcatgtcatacatttgccaagttgaagactttggcacttggtgaatggtgcatgactcatgacctcagtgcattgattcggtttctacagcaatcaccaattttggagaagcttactattaaaatcccagaggaacccaaatgttctatggatgcaggacaacaaaagataccagaagagccgtttgtatccaaccatcttaagattgttgaaattaaatgcaaaggcaaagaggtcatgtgggtttgcaaattcttgaagaccctgggtacctttggcatacccctcgagaaaattaacatcaaactgactagtgaacactgtcgatctgaatgttttaattttgtctgtactggtttcagctgctcctag</cdnaseq>

Protein Sequence

<aaseq>MPPRIRRAPARRAAPEEVPDRVSALPDEALHAVLSLLPAHDAVR TCVLARRWRHLWEHAPALRVTDVEGWNPRLRGDGLGRFIRFVDGLFVSRRRRDAPLEL CDLDFDFPEDKGKDWHVNRWIMLALLRHHARVLRISLPAYITLPDVPLISQRLTRLEL DGVLGNDNILDFSCCPALIALKMKCCRINAEKMSSPSVKILSLASCEFYPATRTQMSF PSVVSLELDGCSGSVPFLESMPSLVAAIVIFDDDYADRCDNSVLGDCGDDSCVDCCNY SDRSKCVCLNGLLEATHLELSAEPAMYVFRRDLNLLLACHTFAKLKTLALGEWCMTHD LSALIRFLQQSPILEKLTIKIPEEPKCSMDAGQQKIPEEPFVSNHLKIVEIKCKGKEV MWVCKFLKTLGTFGIPLEKINIKLTSEHCRSECFNFVCTGFSCS</aaseq>

Gene Sequence

<dnaseqindica>2216..2253#1599..1800#1340..1504#186..1091#aggagtgcggatcatttttcggccctacgcgcggcctccctcccgggacgaatgaacgcgctcgccaacgcccggcgatcgaagcggcggcggttcgatggattataaaactagtatatctctcgcttctctctatcattctccgttgccacgctaatcgctcagcgcggcaactgttcgacggaatgccgccccggattaggagggcgccggcgaggcgagcggcgccggaggaagtgcccgaccgcgtcagcgctctgccggacgaggcgctccacgccgtgctatcgctgctcccggcgcacgacgcggtgcggacgtgcgtgctcgcccggcgctggcgccacctctgggagcacgcgccggcgctccgcgtcaccgacgtcgaggggtggaatccgcggctgcggggcgacggcctcggcaggttcatccgcttcgtggacggcctcttcgtcagccgccgccgccgcgacgcgcctctggagctgtgcgacctggacttcgatttcccggaggacaaggggaaggattggcatgtcaaccgctggatcatgctagccctgttgcgccaccatgcccgggtgctacggatctctttgcccgcgtacatcacgctgcctgatgtgcctctcatctctcagcgcctcaccaggttagagcttgatggtgttcttggcaacgataacattcttgatttctcctgctgcccggcgctgattgctctgaagatgaagtgctgccgtatcaatgccgagaagatgtcatctccatccgttaaaatcttgagccttgcctcctgtgaattttatccagctacccgtactcagatgtcttttccaagtgttgtttcattggagctagatggatgttctggtagcgttcctttccttgaaagcatgccatccttggtagctgcaattgttatatttgatgacgattatgcagacagatgtgacaatagtgtccttggtgactgtggcgacgattcttgcgttgattgctgcaattattctgaccgcagcaaatgcgtttgtctcaatggtttattggaagctacacacttggagttgtcagctgaacctgcaatggtatgtatatctttcttgtgtcttcttgtcttgtaactttctaatatagttttaatttcaccacttgttatgtagtaaacatatccatcactagggtagcattagcatgatcatgcttggtacttacacctttaacaaaagattgtttttaaatatttttcattgcttccttctggttatactacatcttgtacttacaaaaataatggctacttaattgatctgtggctcctttgcactttgtgcagtatgttttcaggagggatttaaatttgctcttggcatgtcatacatttgccaagttgaagactttggcacttggtgaatggtgcatgactcatgacctcagtgcattgattcggtttctacagcaatcaccaattttggagaagcttactattaaaatcccagaggtattatatattgtagataagataggtgcatgttattaaagttactatagatgttttgattgagctagtatgataacttattttccatgcataggaacccaaatgttctatggatgcaggacaacaaaagataccagaagagccgtttgtatccaaccatcttaagattgttgaaattaaatgcaaaggcaaagaggtcatgtgggtttgcaaattcttgaagaccctgggtacctttggcatacccctcgagaaaattaacatcaaactgactagtgaacactgtcgatctgaatgtgagctaatctgatgactcatgtcatggttatttttacataaaatttgtgaatacatgtattaattaagaaaccaagcagtgaaaaaattcaagctaatcaaaagaaattcgttggtcaaaatctgcattcatgtgtgagagataagcaggcaccccatacttgttgaagagaaaatgaagggtaatataatatttgtatcaaactagcaagcatctaaacgctttatactatcgttgggttgaattgctatgcatgcatgatgaaatcatacactgactagttttgagttgtatatgtctagataatttattgatattattgcatatgttctgtactgttcatacttcatactgtaaaatattatcctttgtccacaccagcccattttgattgaattttttgttgtctgcaggttttaattttgtctgtactggtttcagctgctcctagaggttagatggatatgttatctttttttagttatgttttagactgttatgcaacaaaattttagctatgatgtgactttattttctatctctatggatcttatggacttgatgaatattttactcaattggaacaaataacgagaactttgaatctgtttcatgtgtagtactcccttcatcccaaaatataaggcacaaccacttctaacacacagaccaaaaaaatttagtcacctccttgattgaatcacatccatacatgcaagcaatgtgattgtgagacttaatggtacatgaattaaaataaaccaaatttaaagaaccaagagatgataattaatatatgcatgcatgcacgccttatattatgagacatagaaaaaagtggttgtgccttatattttaggatggagggagtagctgttttagtaattgagtaaagccactctttagaagtaaccgtgttttctattgaataacgagtacttaagaatctgtttcattgattagtggcactttcagttaacgattttttaaatataccctctatgtgaagttgggaatattgaaatcttttttgcaatctggcaatgaaggttttgtgctgaggctttctgcttatatttatgcaatctgcaattctgcatatgtacataaaggcggaaacaaaggacttttcattgactgaagtttagagttactgtaattaattttttaaaataaatggtagtgacccccagtcagtaatgaaaggaaaagagaagataaactatagactactatcaccatccttctttctaccttatccaatgtagtattggcagtattgcaccatatgccatcattttttgaattcaactccatgagccccatgttgatatcgttttattcattcatttcaagtctgcatattttcctttccaaaaactataagaactcgacatgaagtgtttgatctaactatgctgtatttatcatccagcatacatgctaattttgggtggttaaccattataaaagaaactaggtcagcccattgttactccttttttcttcattggctaactttatgctgttttttctgtctccttgataactgcccaatcttcggagttcataatcagacaatgcacatactcaagtgagctagcttgtgtgcacataaaagatatgctatcgattcagatccaccaaactttatcgttacccttatgaccagaataaaatagcataagtttagtgcactagacacgaattgttgtatcaaaagcatctgaaatccgtaaggtgtcatatggtccctgctctgagtacgaggagaattagatcataaaccaccctaagtctagctatcgggactctttttttagttgtagcatgtacagtttctttatttgattctatttcagtcaatgaagttagctagttctctcatgcagttgaattttttttagccttctggatcaagaggaggtcggaagaattgggccgttggtggatgagatatctcttgagatattattcagacgtatccgtggtgttgcagtcctcttattatattgattaagtagtctcatcggatttggttccatatttactatattagcgatattagaagtactcttacatatttggctaaagtgtagccttgcagtatgagtcatagctctactgcttatgatgctaaagaactcgtatcggtaccatatctagttctgtatgtacgacattataagtagccttatatattatgctagtatagccttgcaggatgagtggtatagctctgttgcgtatgatgctaaagaactcgccttctaaatctgatgcaatttagatataaattcggttgctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0208100, RefSeq:Os11g0208100