Os11g0208400

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Revision as of 09:04, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0208400| Description = Cyclin-like F-box domain containing protein| Version = NM_001074002.1 GI:115484652 GeneID:4350039| Length = 2784 bp|...")
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Gene Name

Os11g0208400

Description

Cyclin-like F-box domain containing protein

Version

NM_001074002.1 GI:115484652 GeneID:4350039

Length

2784 bp

Definition

Oryza sativa Japonica Group Os11g0208400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:5540307..5543090

Sequence Coding Region

5540650..5540654,5541145..5541334,5541415..5541570,5541751..5542677

Expression

GEO Profiles:Os11g0208400

Genome Context

<gbrowseImage1> name=NC_008404:5540307..5543090 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:5540307..5543090 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtctcctaagcaaaagagcttgaggagcaagagaatggctgaggccagcgaagaggacgggatcgacgtcctcccggatgctctcctccagcacattctgtccttcctgccggccgaggatgccgtgaagacctgtgtcctgtcccggcgctggcgccatctctggaaattgacgcccatcctgtgcatcaccaatacagagagatggaggagccccaaggacttcatcaagcttgtcaaccatctagtgctcttccgtggcagctcgcctctacacaagtttgagatcaaaatcaattcatgtgcacactggatgataatgtccggcgacagtaatccattccattgtgccatcatgtgggtcatgtatgctctaatgtgccaagtccaggtgcttacaataaaaaatatgcatgcatacattgaaatggacgatggcttctcactcttctcgaggcacttgacagagctcaatctttctggtctggatttcagaaaatttgtcctcaacttctccagctgtcctgcattggaatatatatatttctctgcgagttgctgttttaattctgtcgagaagatcttgtcccagtcagtaaaatatcttacattcgacttccctgaattcagtgaacatcaccgcactcacatttatgcaccaaacctcattacgctccgtcttgatgattgttggggcagagttccatttctggaaagcatgccgtcattaattgcagcatttgtcagaccccaccgagatagtgatgacttgtgtagtaatacttactctggtaactgtgaagatgaatactgtcatggttgttatggtatggtagataatgctggcaatgacagtgccaaatgcgtgctccttggaggtttatcagaagctaagaagttggaattgatagctggacctgaaatgcgtattttcagaagtgatttaagatggtgccctttgtttagcaagttgaagtctttgttactcaatgagtggtgtgttgctaataatttctgggcactagcttgtattctcgaacactcaccggttctactgaaactcactcttcaaatttccaaggaaacaaaacctatgataggggcagtagaaaattacagtgcattggtgaaaccagctgcaatatccaaacatcttaaggtagtgaaagtccactgtaaagaagttgatgaaggggtctgtgaaactgtgaagttcttgagtacattggatgtagtggttcttatcagaaggatggatcggtcgacaaatcgttga</cdnaseq>

Protein Sequence

<aaseq>MSPKQKSLRSKRMAEASEEDGIDVLPDALLQHILSFLPAEDAVK TCVLSRRWRHLWKLTPILCITNTERWRSPKDFIKLVNHLVLFRGSSPLHKFEIKINSC AHWMIMSGDSNPFHCAIMWVMYALMCQVQVLTIKNMHAYIEMDDGFSLFSRHLTELNL SGLDFRKFVLNFSSCPALEYIYFSASCCFNSVEKILSQSVKYLTFDFPEFSEHHRTHI YAPNLITLRLDDCWGRVPFLESMPSLIAAFVRPHRDSDDLCSNTYSGNCEDEYCHGCY GMVDNAGNDSAKCVLLGGLSEAKKLELIAGPEMRIFRSDLRWCPLFSKLKSLLLNEWC VANNFWALACILEHSPVLLKLTLQISKETKPMIGAVENYSALVKPAAISKHLKVVKVH CKEVDEGVCETVKFLSTLDVVVLIRRMDRSTNR</aaseq>

Gene Sequence

<dnaseqindica>2437..2441#1757..1946#1521..1676#414..1340#agtagctagcgcaggccctaaggcaaccaaaaagagtggaagaagagcagtgagccctgaaagcgtgtctttggctacatccaccgccacgaccccgccgtctccggcgagctcgccggcgaatcttcctcagatccgcgctactgcagccgcgtccccctccccacgtgcggcacgagcgtcgcctcgcctcgtccctgcaaggtgcatcgtcctagcgtcgccccggccccgaccacggcaaagtcgaaggcaccgccgacacggccagccacccggctggctgggcctcctccccgccatgggcgccgcgcgtctgattgattaagcgaggacctcgcattgcacctggtgagtcggctcttcgcttcttgcgcggtagtgcccgcgtcgcccgccacctgttcgacggaatgtctcctaagcaaaagagcttgaggagcaagagaatggctgaggccagcgaagaggacgggatcgacgtcctcccggatgctctcctccagcacattctgtccttcctgccggccgaggatgccgtgaagacctgtgtcctgtcccggcgctggcgccatctctggaaattgacgcccatcctgtgcatcaccaatacagagagatggaggagccccaaggacttcatcaagcttgtcaaccatctagtgctcttccgtggcagctcgcctctacacaagtttgagatcaaaatcaattcatgtgcacactggatgataatgtccggcgacagtaatccattccattgtgccatcatgtgggtcatgtatgctctaatgtgccaagtccaggtgcttacaataaaaaatatgcatgcatacattgaaatggacgatggcttctcactcttctcgaggcacttgacagagctcaatctttctggtctggatttcagaaaatttgtcctcaacttctccagctgtcctgcattggaatatatatatttctctgcgagttgctgttttaattctgtcgagaagatcttgtcccagtcagtaaaatatcttacattcgacttccctgaattcagtgaacatcaccgcactcacatttatgcaccaaacctcattacgctccgtcttgatgattgttggggcagagttccatttctggaaagcatgccgtcattaattgcagcatttgtcagaccccaccgagatagtgatgacttgtgtagtaatacttactctggtaactgtgaagatgaatactgtcatggttgttatggtatggtagataatgctggcaatgacagtgccaaatgcgtgctccttggaggtttatcagaagctaagaagttggaattgatagctggacctgaaatggtacacttacactaagatcttatcccctttgtgttatttgctgtccattatttctgtttccttccctatattcgtcatctggcattttaacattcttttgcatgattgctactgtcttggttcttaaatcatacattcactataaagattgaatgatcttctcgcctgtactttgtgcagcgtattttcagaagtgatttaagatggtgccctttgtttagcaagttgaagtctttgttactcaatgagtggtgtgttgctaataatttctgggcactagcttgtattctcgaacactcaccggttctactgaaactcactcttcaaatttccaaggtagaagtttttacagccacttcactattaatgttattgtgcatgatttgttgaagctgaaattcatctccctgctacaggaaacaaaacctatgataggggcagtagaaaattacagtgcattggtgaaaccagctgcaatatccaaacatcttaaggtagtgaaagtccactgtaaagaagttgatgaaggggtctgtgaaactgtgaagttcttgagtacattggatgtagtggttcttatcagaaggatggatcggtcgacaaatcgtaagataactgttggccctcttcattatttcaatatctctgaaatttctatttttttctctttgtgaatgaaataaagaatgactaaaattgcaaaaaagggaaaagacagagaaaggtacattttgatgtgataaagagaaaagcatgatccaatatattttgttgtcatgtatgatccatggaagtatacatagttttttcatgttgaactgagtaatataaatagaatcataatatgctgaattctaaatttgagctatatatgtcaaaaaaaaaaaaagtatttacttcaatagttttcacttcgtgttattggcacaggtttgaatgagtagttctgcacaacaacacaatttgttgacttgtgaaatagctctttattgtacatgctatctgacattgtatggctaattatttaccttcgtctttgaaaattaataactgctccttacctttgaaaggtcattgggtattgcataccttgtaggttgaatcacccatccgcccctcgtaacatttattgtactctacgtgttgttgcagtcttcagtttcgaggaaggaaattcgagttcaagtcatgatgaaggatcctctagatgaagtacctgttgaatattcaggaatgcaaggcttaaacttgcagtgacaagaactctgccttttgtcaatgagattcatattaagttccactagtaggaagaactgggatataatgagttgtttagaccgtctagctgttggagctggttatttttcttgaattatccttttataagactgtctcgactgcttaattagctttttggtggtagtatatgccacttattagttgt</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0208400, RefSeq:Os11g0208400