Os11g0215400

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Revision as of 09:04, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0215400| Description = Peptidase A1, pepsin family protein| Version = NM_001074038.1 GI:115484724 GeneID:4350077| Length = 3126 bp| Defini...")
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Gene Name

Os11g0215400

Description

Peptidase A1, pepsin family protein

Version

NM_001074038.1 GI:115484724 GeneID:4350077

Length

3126 bp

Definition

Oryza sativa Japonica Group Os11g0215400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:6003899..6007024

Sequence Coding Region

6003989..6005145,6006888..6007017

Expression

GEO Profiles:Os11g0215400

Genome Context

<gbrowseImage1> name=NC_008404:6003899..6007024 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:6003899..6007024 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctaggaggattattttcctactgttcctcatagcgtgtgtagtcgacagaagcgtcaacgtgcattgcgagaagcaacttgtgtcatcgttcgacaaacatgacaacgcatcgtcttcactagctgagctgttctctgggaaaaggataccccttttccgatatatcaccaacaaaacatcaaggctatcaactaaagctgtacaggtcggatgggatcgagggctacaaacatccctatatgtcatatcagttgggcttggcacaccagccaagacacagatcgtagagatagacaccgggagctccacatcctgggtcttctgcgagtgcgacggctgccacaccaacccccgaacatttctgcagtcaaggtctaccacatgtgccaaggtgtcctgtggcacttccatgtgcttgcttggaggcagtgatccccactgccaagattcagagaactatcctgactgcccattccgtgtttcatatcaagatggatcggcctcctatggcattctgtaccaggacaccctgacattctctgatgttcagaagatccccggcttctcgttcggctgcaacatggacagcttcggcgccaacgaattcggcaatgtggatgggttactcgggatgggtgctggcccaatgtccgtgctgaagcaaagctcaccgacattcgactgcttctcctactgcctgccgctgcagaagagcgagaggggattcttcagcaagaccacaggctatttcagcttgggcaaagtcgcaacaagaacagatgtcaggtacacgaagatggtcgcacgcaagaaaaacacagaattgttcttcgttgatctcaccgcgatctctgtcgatggagagaggctcggcttgtcgccgagcgtcttcagtcgaaagggcgtcgtgttcgactcaggttcagagctgtcctacatcccagaccgtgcgttgtccgtgctgagccagcggattcgcgagctgctgctgaaacgcggggcggcggaggaggagagcgagcgcaactgctacgacatgaggagtgttgatgagggggacatgccagccatatccctgcacttcgatgatggagctcggttcgatctcggcagccatggcgtgttcgtcgagagatcggtgcaggagcaggacgtgtggtgcctggcgtttgcgccgactgaatctgtctccattataggaagcctgatgcagacttccaaggaggttgtgtatgacttgaaaaggcagctgattggcattggaccatcaggagcttgttag</cdnaseq>

Protein Sequence

<aaseq>MARRIIFLLFLIACVVDRSVNVHCEKQLVSSFDKHDNASSSLAE LFSGKRIPLFRYITNKTSRLSTKAVQVGWDRGLQTSLYVISVGLGTPAKTQIVEIDTG SSTSWVFCECDGCHTNPRTFLQSRSTTCAKVSCGTSMCLLGGSDPHCQDSENYPDCPF RVSYQDGSASYGILYQDTLTFSDVQKIPGFSFGCNMDSFGANEFGNVDGLLGMGAGPM SVLKQSSPTFDCFSYCLPLQKSERGFFSKTTGYFSLGKVATRTDVRYTKMVARKKNTE LFFVDLTAISVDGERLGLSPSVFSRKGVVFDSGSELSYIPDRALSVLSQRIRELLLKR GAAEEESERNCYDMRSVDEGDMPAISLHFDDGARFDLGSHGVFVERSVQEQDVWCLAF APTESVSIIGSLMQTSKEVVYDLKRQLIGIGPSGAC</aaseq>

Gene Sequence

<dnaseqindica>1880..3036#8..137#aagcaccatggctaggaggattattttcctactgttcctcatagcgtgtgtagtcgacagaagcgtcaacgtgcattgcgagaagcaacttgtgtcatcgttcgacaaacatgacaacgcatcgtcttcactagctggtaactatgaatagcacatatgcgtgtgtatcttatttaataagattttaatactttgaagtttgaggatgttcatgggtagtttttgttgaaaataatgttcatgggtatttatcaatcgtacatactagtgtattaagtcgctcattcgtgcgactatagccatcatgttataaattgcgtgcaagaaaatatgttaaagataatatgaaattaaataattagttacttggcttgatagcataaatctaagagatttcctggagttaaatgtaattctatttcatattcttgcttattttctttgtgaatgcattcaatattgaaataaaaccaacataaacataattaccatgtgtatagaatttgtaaatgtttaagggccaaatattaaagtttattttgtcgtttgaattagtctagttgtgtgtgtgaattctagttagtctagttctgcactcataaatgaaacagtaatgaaactaattatgcatcaaaacaacacgctattaatttgtactagttgctagctaactagtcaccatcacctatatattgttggcttgttggttagtactccactgtaaaaaaattaagtccttgaaaaaaaaatgacatggttgaccaattagggctccttaatttgaattggaggaaaaatgaaggaaaatcaaaggaaatgagatcctacattattcatgccttgatttgtagaaatgaggaaacaaaaacgtaggaaactttttcattcctatgattctagaggaagaacgtaggaaatttaacatccactctaagctcatgtttattctatctcgcataggatcgaggcaaatctaatagctcatgattacttgtctattcaattagtgtaggttagatgtgcataagtagataacccacccaatcgtatcttcctatatagttggtacccactaaggggtatttactcctataaagcaagacatgcaagaagccatatcatcaacaattttaaaccatcaaatcacattagtacaaacataacaaccataggatcaagaaactacttattcatccaattcaatcatttattagttatccaatcacctctctttgctctacctcatagtcacacacagcactattatatattttgtgcataacaccatcttttttcgaatacaactcaaattattgtttaacatgtgtgttttgttttattatgcatgattagttagcatttaattattaggaatcgttacctgaatcaattttcagaaaaagcttgaatgaagcatagagatacaaattgtctaactacaacgatacccatattgcgcatgaaaataatattcatatattataacaatacacaatgacgtttggaaaaataaagcatgaattgtattgtagtaacataagatatatatataaagccacattatcatatattttgtatatatatagagttgcacataaccattaaaagtacgattttgtttgacgataaaactacaaaactctcggcaagacgcggggtgccaactagtttaatttaataatccaaatccattcatgtgttttttctacgatccaatcaaacacacgttcctacaacattcctacgtttttcaattctctgttttgcatatgtattcctatcctattcctacgttttctcgatcttgcatttcaaaggagcccttaacgtaaaatttcttcctctcaattaatttccctctcctttttctgtcttgcagagctgttctctgggaaaaggataccccttttccgatatatcaccaacaaaacatcaaggctatcaactaaagctgtacaggtcggatgggatcgagggctacaaacatccctatatgtcatatcagttgggcttggcacaccagccaagacacagatcgtagagatagacaccgggagctccacatcctgggtcttctgcgagtgcgacggctgccacaccaacccccgaacatttctgcagtcaaggtctaccacatgtgccaaggtgtcctgtggcacttccatgtgcttgcttggaggcagtgatccccactgccaagattcagagaactatcctgactgcccattccgtgtttcatatcaagatggatcggcctcctatggcattctgtaccaggacaccctgacattctctgatgttcagaagatccccggcttctcgttcggctgcaacatggacagcttcggcgccaacgaattcggcaatgtggatgggttactcgggatgggtgctggcccaatgtccgtgctgaagcaaagctcaccgacattcgactgcttctcctactgcctgccgctgcagaagagcgagaggggattcttcagcaagaccacaggctatttcagcttgggcaaagtcgcaacaagaacagatgtcaggtacacgaagatggtcgcacgcaagaaaaacacagaattgttcttcgttgatctcaccgcgatctctgtcgatggagagaggctcggcttgtcgccgagcgtcttcagtcgaaagggcgtcgtgttcgactcaggttcagagctgtcctacatcccagaccgtgcgttgtccgtgctgagccagcggattcgcgagctgctgctgaaacgcggggcggcggaggaggagagcgagcgcaactgctacgacatgaggagtgttgatgagggggacatgccagccatatccctgcacttcgatgatggagctcggttcgatctcggcagccatggcgtgttcgtcgagagatcggtgcaggagcaggacgtgtggtgcctggcgtttgcgccgactgaatctgtctccattataggaagcctgatgcagacttccaaggaggttgtgtatgacttgaaaaggcagctgattggcattggaccatcaggagcttgttagttagttattgggttgtgtgtgtgtatatatatatatatagagtagctctattgtacacccctcccttagaataactattctacacctcca</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0215400, RefSeq:Os11g0215400