Os11g0224900

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Revision as of 09:05, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0224900| Description = Similar to NBS-LRR protein (Fragment)| Version = NM_001074066.1 GI:115484780 GeneID:4350109| Length = 3066 bp| Defi...")
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Gene Name

Os11g0224900

Description

Similar to NBS-LRR protein (Fragment)

Version

NM_001074066.1 GI:115484780 GeneID:4350109

Length

3066 bp

Definition

Oryza sativa Japonica Group Os11g0224900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:6515788..6518853

Sequence Coding Region

6515788..6518853

Expression

GEO Profiles:Os11g0224900

Genome Context

<gbrowseImage1> name=NC_008404:6515788..6518853 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:6515788..6518853 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggaagctgcactacttgctctttcaaagattggttcctatgcagcaattgaagcggccatggttgctaaatccaaaatttctaatctaatggagctctcagctactgtgcaacggatacggaggcaatttttgatgatgaacttctttatacggaaaatgggtgcctcttacctcagcgatgagctcctgaagggatggatcgcagaggtgcgaatgctggcgtaccgtgttgaggatgtattggacagctttttctaccattctattcaattcaagaaagataagttcctgaataagattgttaagggatcacactatgctgttgtttttaatgcaattgctgatgagttggttcagatagagaaggatattgagcatgtttcaaagttgaaggacatgtgggtttaccctgtcagtcagcttattcctactcaagtcaccatctctgaacaccgatttcctcagtacagttttccccgactaatgaaagatgaggatcttgtggggatggagaataacagacaacacttaaagcaattattcagtcatggaatttcagctctcagggtgatatctgtgtggggtatgggtggcatggggaagaccacattggtccttaatgtatatgagcaacataaggagaaatttgacattaatgtgtggcttactgtgtctcaagcattttctgtggaggctttgctgaggaagctattatgggagataaggcgtagatgtgagctcacaacaccaggtgatggtgatagtgtcaacaaggagcagcaggcttcagatgagactgacaaactggaggtttcacaattgaaagaactgaaggatgagttaaagaaagcattaatgcgaaagagatttatggttgtacttgatgatgtatgggaccgtcaagtatttgacatgatgcatgatgtgtttgaggattttaggaatggaagtcgcgttgtgatcacgacaaggagaggggatgtggctgctcttgctcacgagggttgccagctcaaacttaatccgttagaattgaacgatgccctcctcctgttcagtaaaaaggcatttcctaatagcaatgaccttgagtgccccttaaagctcaaggacctagccacagacattgctaagaaaagcaatgactcatcactgacagagtgccgattggagctaaatgggctagctactgatattgcagagaaatgcaactgtttgcctttggcaaatagcccagcacaggttcaagagctagttgcttatattgtaaagaactgccaggacttattacagatggaaaataatccatctgggcttcagaagcttgctactgatattttaaagaaatgtgagctcttgcctttggtgaaatgctcagcagagttgcagaagctcgccattgagattgtaaagaaatgtgggggcttgccgcttgcaattgcttcagtaggcagcttgctgtctgcaaggatgcaaatagagtgtgtgtggaagcagattcatgatcagcttccatgtgagctggagaaggatgatcaggtccgaggagttctaactctgagctactatgacttgcctggagagctcagaaattgctttctgtactgcagcatgttcccagaagattacctcttgtcaagggaggttcttgtgagacagtggattgcggaaggttttgtggaaaagaaaggggacagcactctggaggaggtggcagagggatatctcatggagctggttcatcgaaacatgcttcaactcgtgtataatgatgagcttggcagggttagtacatgcagcatgcatgacattctgagagagctggctctttctatctccaaagcagagttgtttggcaccgcaaacaattttagtgagatggcacagatgaacacaaatgtgcgtcgcctgtcagcatgtcgatggacacacacagaacatgatttatcaaagataaaattcccacatcttcgaaccgtaattgcactccagtcaagtatggattttgtaccatcaatattatctgaatctaagcaccttactgtccttgagctgcaagactcaggaatcaaccaagtcccagcatcgataggggatctttttaacttacggtacattggcctaaggaacacagcagtaaaatctctaccggactctatagagaagctcgtgaatcttcaaactcttgatgctaagtcaaccaagatagaaaaattacctagtgggatagtgaagctctataagttaagacacttgctgattgacagattaagtgatggtacaagaacggaattccggtatttcgaaggagtggtagcaccaaaagggttatcgaggttggaagaactgcagacacttgagactgtagaagctagcaaggacttgggggaacatcttgaaaaaatgatccaattaagaaatctctggatcggcaatataaaagctgggcactgtgcacagctgcttgcttcattgtctaagatgccgcttctttatagcttgcttctgtgtgcaagtgatgaggaggagaaacttaacatcgaaaaactcgtaccgacatccacaatgctccaaaagctaattatcagaggatgcaccagtgagagcacacttgagtgcccggtgtttcaggaccatggacgacgcctgaagtatctagctctaagccggtgtcaccttgggcatgatgcatttgagaggctcgaaaagtgtgtgccgaacctgacatatttgagtcttaacaaggtgcataccaatggtgcacacactttggttcttcctgcaaagtcgtttccgctgctgaagacactcgtcttgaggaacatgtccaatgtcaatcttctgaaaattggagctgacgcccttaaatgtatcgaaggtttatacattgtgtcattgtcaaatctaaagagcgtccctgaaggcattgaatcccttagctcccttaagaaactcacccttctaggcttgcacaatgacttcaaagctgagtggaacaagaaacgaatgcacgagaagatgaaacatgtcactaagcttcgtgtgtacgagtggtcctaa</cdnaseq>

Protein Sequence

<aaseq>MAEAALLALSKIGSYAAIEAAMVAKSKISNLMELSATVQRIRRQ FLMMNFFIRKMGASYLSDELLKGWIAEVRMLAYRVEDVLDSFFYHSIQFKKDKFLNKI VKGSHYAVVFNAIADELVQIEKDIEHVSKLKDMWVYPVSQLIPTQVTISEHRFPQYSF PRLMKDEDLVGMENNRQHLKQLFSHGISALRVISVWGMGGMGKTTLVLNVYEQHKEKF DINVWLTVSQAFSVEALLRKLLWEIRRRCELTTPGDGDSVNKEQQASDETDKLEVSQL KELKDELKKALMRKRFMVVLDDVWDRQVFDMMHDVFEDFRNGSRVVITTRRGDVAALA HEGCQLKLNPLELNDALLLFSKKAFPNSNDLECPLKLKDLATDIAKKSNDSSLTECRL ELNGLATDIAEKCNCLPLANSPAQVQELVAYIVKNCQDLLQMENNPSGLQKLATDILK KCELLPLVKCSAELQKLAIEIVKKCGGLPLAIASVGSLLSARMQIECVWKQIHDQLPC ELEKDDQVRGVLTLSYYDLPGELRNCFLYCSMFPEDYLLSREVLVRQWIAEGFVEKKG DSTLEEVAEGYLMELVHRNMLQLVYNDELGRVSTCSMHDILRELALSISKAELFGTAN NFSEMAQMNTNVRRLSACRWTHTEHDLSKIKFPHLRTVIALQSSMDFVPSILSESKHL TVLELQDSGINQVPASIGDLFNLRYIGLRNTAVKSLPDSIEKLVNLQTLDAKSTKIEK LPSGIVKLYKLRHLLIDRLSDGTRTEFRYFEGVVAPKGLSRLEELQTLETVEASKDLG EHLEKMIQLRNLWIGNIKAGHCAQLLASLSKMPLLYSLLLCASDEEEKLNIEKLVPTS TMLQKLIIRGCTSESTLECPVFQDHGRRLKYLALSRCHLGHDAFERLEKCVPNLTYLS LNKVHTNGAHTLVLPAKSFPLLKTLVLRNMSNVNLLKIGADALKCIEGLYIVSLSNLK SVPEGIESLSSLKKLTLLGLHNDFKAEWNKKRMHEKMKHVTKLRVYEWS</aaseq>

Gene Sequence

<dnaseqindica>1..3066#atggcggaagctgcactacttgctctttcaaagattggttcctatgcagcaattgaagcggccatggttgctaaatccaaaatttctaatctaatggagctctcagctactgtgcaacggatacggaggcaatttttgatgatgaacttctttatacggaaaatgggtgcctcttacctcagcgatgagctcctgaagggatggatcgcagaggtgcgaatgctggcgtaccgtgttgaggatgtattggacagctttttctaccattctattcaattcaagaaagataagttcctgaataagattgttaagggatcacactatgctgttgtttttaatgcaattgctgatgagttggttcagatagagaaggatattgagcatgtttcaaagttgaaggacatgtgggtttaccctgtcagtcagcttattcctactcaagtcaccatctctgaacaccgatttcctcagtacagttttccccgactaatgaaagatgaggatcttgtggggatggagaataacagacaacacttaaagcaattattcagtcatggaatttcagctctcagggtgatatctgtgtggggtatgggtggcatggggaagaccacattggtccttaatgtatatgagcaacataaggagaaatttgacattaatgtgtggcttactgtgtctcaagcattttctgtggaggctttgctgaggaagctattatgggagataaggcgtagatgtgagctcacaacaccaggtgatggtgatagtgtcaacaaggagcagcaggcttcagatgagactgacaaactggaggtttcacaattgaaagaactgaaggatgagttaaagaaagcattaatgcgaaagagatttatggttgtacttgatgatgtatgggaccgtcaagtatttgacatgatgcatgatgtgtttgaggattttaggaatggaagtcgcgttgtgatcacgacaaggagaggggatgtggctgctcttgctcacgagggttgccagctcaaacttaatccgttagaattgaacgatgccctcctcctgttcagtaaaaaggcatttcctaatagcaatgaccttgagtgccccttaaagctcaaggacctagccacagacattgctaagaaaagcaatgactcatcactgacagagtgccgattggagctaaatgggctagctactgatattgcagagaaatgcaactgtttgcctttggcaaatagcccagcacaggttcaagagctagttgcttatattgtaaagaactgccaggacttattacagatggaaaataatccatctgggcttcagaagcttgctactgatattttaaagaaatgtgagctcttgcctttggtgaaatgctcagcagagttgcagaagctcgccattgagattgtaaagaaatgtgggggcttgccgcttgcaattgcttcagtaggcagcttgctgtctgcaaggatgcaaatagagtgtgtgtggaagcagattcatgatcagcttccatgtgagctggagaaggatgatcaggtccgaggagttctaactctgagctactatgacttgcctggagagctcagaaattgctttctgtactgcagcatgttcccagaagattacctcttgtcaagggaggttcttgtgagacagtggattgcggaaggttttgtggaaaagaaaggggacagcactctggaggaggtggcagagggatatctcatggagctggttcatcgaaacatgcttcaactcgtgtataatgatgagcttggcagggttagtacatgcagcatgcatgacattctgagagagctggctctttctatctccaaagcagagttgtttggcaccgcaaacaattttagtgagatggcacagatgaacacaaatgtgcgtcgcctgtcagcatgtcgatggacacacacagaacatgatttatcaaagataaaattcccacatcttcgaaccgtaattgcactccagtcaagtatggattttgtaccatcaatattatctgaatctaagcaccttactgtccttgagctgcaagactcaggaatcaaccaagtcccagcatcgataggggatctttttaacttacggtacattggcctaaggaacacagcagtaaaatctctaccggactctatagagaagctcgtgaatcttcaaactcttgatgctaagtcaaccaagatagaaaaattacctagtgggatagtgaagctctataagttaagacacttgctgattgacagattaagtgatggtacaagaacggaattccggtatttcgaaggagtggtagcaccaaaagggttatcgaggttggaagaactgcagacacttgagactgtagaagctagcaaggacttgggggaacatcttgaaaaaatgatccaattaagaaatctctggatcggcaatataaaagctgggcactgtgcacagctgcttgcttcattgtctaagatgccgcttctttatagcttgcttctgtgtgcaagtgatgaggaggagaaacttaacatcgaaaaactcgtaccgacatccacaatgctccaaaagctaattatcagaggatgcaccagtgagagcacacttgagtgcccggtgtttcaggaccatggacgacgcctgaagtatctagctctaagccggtgtcaccttgggcatgatgcatttgagaggctcgaaaagtgtgtgccgaacctgacatatttgagtcttaacaaggtgcataccaatggtgcacacactttggttcttcctgcaaagtcgtttccgctgctgaagacactcgtcttgaggaacatgtccaatgtcaatcttctgaaaattggagctgacgcccttaaatgtatcgaaggtttatacattgtgtcattgtcaaatctaaagagcgtccctgaaggcattgaatcccttagctcccttaagaaactcacccttctaggcttgcacaatgacttcaaagctgagtggaacaagaaacgaatgcacgagaagatgaaacatgtcactaagcttcgtgtgtacgagtggtcctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0224900, RefSeq:Os11g0224900