Os11g0226700

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Revision as of 09:05, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0226700| Description = NB-ARC domain containing protein| Version = NM_001074073.2 GI:297611490 GeneID:4350117| Length = 7256 bp| Definitio...")
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Gene Name

Os11g0226700

Description

NB-ARC domain containing protein

Version

NM_001074073.2 GI:297611490 GeneID:4350117

Length

7256 bp

Definition

Oryza sativa Japonica Group Os11g0226700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:6604602..6611857

Sequence Coding Region

6606485..6608596

Expression

GEO Profiles:Os11g0226700

Genome Context

<gbrowseImage1> name=NC_008404:6604602..6611857 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:6604602..6611857 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgaaaagatttgtggagtactattgaatctgccttcccgaaggatggtttcagcagtagaatagtggtgaccacaacagtgcaatcagtagctaaagcctgcagttcagccaatggctatgtatataaaattagaaggctagataagatacactcaaaaaaattgttcttgaagaatgcttgtccggtggaatatcaagattacattcagcctgattcagtacggattttgaagaaatgtgatggtcaagcactcgcccttcttacagtaggtcaattcttgcgaaaaatgggctggccaagagaacccaagtgtgaagatgcttgcaaccagctatgcaatcatctggaggatgacgacaccttggagagaatgcgacaggtgctgattcatgagtactctacactatcttgccatgctctcaaagcctgcttgctatattttggcatgttccccagtggtcattcaatcaggagaaaaagactactcaggcgatggtcagctgaaggatttgtagaagcactaccttcaggttcttttcctgatccagcagttgagaatttcaataagctcatggacagaaatatcattcaacccattgatctaagcagcaacgaggaggtgaagacatgtcaaacttatggcatgatgcgcgagttcattttgctcaaatctatttctcaggattttattgctgtctttggtgacaagaagctccaataccaacatgtccgtcgcctttgtctccaaaacaatagtgctgtagatagcagcaatcttgacatcgatttgactcttgtccgatctctggtagtctttgggaaagcaggtaaagctattttggatttcaagaagtatcaactgcttcgagtcttagatcttgaagaatgtactgacttggacgatgatcatctcattcaagtgtgcaacctttttcttctaagatatttgagccttgggggcaaagtcaccaaacttccagaagagataactaaactgaaacttttggagacacttgatcttaggagaagaaaggaggtgactatcaacctgtcaacagaagtcatcaagctaccatatttaattaatctgcttggaaagtttaagctcctaaataaagccaagagattgaacgaactgcagaagtttttgtccgaaaactgtagattgcagacactagcaggatttagcacagacggaagtgaaggatttccagaacttatgggccacatgaagcaattgagaaaggtgaaagtttggtgtactgaactatcagcaagtagttctgggtttactaatcttcaaaatgccattcaaaaatttatacatgacgaacagaatggattcaacgatcctcgctctttgtcgcttaactttgataattgccctgaagacttcctctacgagataaaagccccatgctaccttcgatcgttgaaattacatgctaaattactggaatcgcccaaatttgtggtactattgcgtggcctccaggagttgtgcatttcatcatcagctacaaaattgaccacaggtcttctttcagctttgagtaacctgaggaaattgaagtatctcaagctgattgcagatcaacttgaggagttcattattaaggataatgcattgccaagcctgctaagcctatgttttgtgctgaaccgtcctacattcccggtaatcaaaggaaatgctttgaggtttctcaaatcactccagcttctctgtaaaaatctagttggcctttcagagatcaacattaattgtctcaaacgccttgaggaagtcgttcttcatccatgtgtgaacaaagcaactaaagttacatgggaaagggcagctaaggaacatcccaataggccaaaagttttggtgcttgaaaaggttgatctagcagatggccatgaagaagattcagattcgaccccaactgaaattgtgacaaataaggaatctactgttgcaggaaatggagcagatattgacaaacagaactatattgacaaacagaactatcctaccagtaatatgtcacgtgcaatggtttcccctgctttgactgagccatgcagcgctgggaatggtgtggagtcctcttgtgcctga</cdnaseq>

Protein Sequence

<aaseq>MRKDLWSTIESAFPKDGFSSRIVVTTTVQSVAKACSSANGYVYK IRRLDKIHSKKLFLKNACPVEYQDYIQPDSVRILKKCDGQALALLTVGQFLRKMGWPR EPKCEDACNQLCNHLEDDDTLERMRQVLIHEYSTLSCHALKACLLYFGMFPSGHSIRR KRLLRRWSAEGFVEALPSGSFPDPAVENFNKLMDRNIIQPIDLSSNEEVKTCQTYGMM REFILLKSISQDFIAVFGDKKLQYQHVRRLCLQNNSAVDSSNLDIDLTLVRSLVVFGK AGKAILDFKKYQLLRVLDLEECTDLDDDHLIQVCNLFLLRYLSLGGKVTKLPEEITKL KLLETLDLRRRKEVTINLSTEVIKLPYLINLLGKFKLLNKAKRLNELQKFLSENCRLQ TLAGFSTDGSEGFPELMGHMKQLRKVKVWCTELSASSSGFTNLQNAIQKFIHDEQNGF NDPRSLSLNFDNCPEDFLYEIKAPCYLRSLKLHAKLLESPKFVVLLRGLQELCISSSA TKLTTGLLSALSNLRKLKYLKLIADQLEEFIIKDNALPSLLSLCFVLNRPTFPVIKGN ALRFLKSLQLLCKNLVGLSEININCLKRLEEVVLHPCVNKATKVTWERAAKEHPNRPK VLVLEKVDLADGHEEDSDSTPTEIVTNKESTVAGNGADIDKQNYIDKQNYPTSNMSRA MVSPALTEPCSAGNGVESSCA</aaseq>

Gene Sequence

<dnaseqindica>1884..3995#caaggggatcgaataggaggataagcccgtcgagtagccagaaatcgcagatggaggcagctattttgagcggtttgttgaaaatactcgcgtcgaggatgctctctctggtagatcagaagtacaatctgtacaagggattcaaaggcgacgcagaatttctgttgaaggagctccgcatgatcgccggagccattgacgagcagctcttgcggacggtgagccgtggaagcgtgctgctgctgtccatcgaagagcttcgcgacctggctcgcgacatagaggactgcgtagatcgcatcatgtatcagaaaactcgggatcagcaagcttctcttttcagtatcaattccgtcacgggaacgtcgaagcttcagttggccaaagagatgaagaagctgaggaagagagcagacgaagcgaaagagcggcgagaaagatacacggtggtcgtcggtcatcagtcctcccctgtcagctcggatgagcaacgctgctccggtgcatctgacgggagaaacctccaggctgatctcgtcggcatcgacctgccccgagaagaacttctggagcatctgaaagaagccgagccgaagaagcttaaggtgatatcgattgttgggttctgcggcttggggaagactgcacttgcaagggagttgtacaacaacagcggtctcggccggagtttcagtaaacaggcctgggtttctgcggcacatggtgatccgagcaaggtgttgagggagataatcggacaactggtatctaacccgccatcggatgcctccgttgtcgacctggaccagcttattgtaaatctcactgatcagctgaccaacttgaggtatcaacaattcttcttctaattaggctgatttaagttccacatgctctgctccattttttcatacccgtgattcgatttatgtttcccttatggagaaattttatagtccttaagaaagtaactgaagatactaagattttacactaaaatttttggtatttcaaggtaccaaattttacactagaaaaatatgatacctcctggtattttctcaaggattgtaaaattacccttcccttatgctattcaggtttcttcagattgttgatatgctttagagtggttatagagagcagagtttctttttatgttttttagaaactacagtactgtaatactgctgcctaccttggacggtatagtgttatcaccttcacaatatctccaactatgatggagatatatcatgatgtatgaagatatatatgtccagtcctcagtcctatatccgtctctgtctccctctcaagaaagcaggtggctaggcttatggtagctgtgctgaggtgaggtaatggttgtatagccgtatcacgatggtattatcgagtttcagggtgctatcatagagatagcatcatgctcgtttatagaggtattattgcgttttacattgctatcatggtacattggttttatcaccatataacctgatattgtgatactacagtgtgtcatataactccactccggtgtgtcatggtaacttggctttcagttctagatttggaactctctacttttctgtgtgtttagttgattacagtgtaatagcggtgtatagtttccatgagttatatactcatgttatcttccaaacaaacaacaaactatagactatgcagacaactaaattaacgcagtaaaataattcagtgtgaggcctacggattggacaattacagtacagtgaaaacagaggctgtgcttgcttggcccatggttgttatttgttcatacggagtggatttttactaatgtccattcccttttgttgtttcatgttattaggtatttcattgtaatagatgacatgcgaaaagatttgtggagtactattgaatctgccttcccgaaggatggtttcagcagtagaatagtggtgaccacaacagtgcaatcagtagctaaagcctgcagttcagccaatggctatgtatataaaattagaaggctagataagatacactcaaaaaaattgttcttgaagaatgcttgtccggtggaatatcaagattacattcagcctgattcagtacggattttgaagaaatgtgatggtcaagcactcgcccttcttacagtaggtcaattcttgcgaaaaatgggctggccaagagaacccaagtgtgaagatgcttgcaaccagctatgcaatcatctggaggatgacgacaccttggagagaatgcgacaggtgctgattcatgagtactctacactatcttgccatgctctcaaagcctgcttgctatattttggcatgttccccagtggtcattcaatcaggagaaaaagactactcaggcgatggtcagctgaaggatttgtagaagcactaccttcaggttcttttcctgatccagcagttgagaatttcaataagctcatggacagaaatatcattcaacccattgatctaagcagcaacgaggaggtgaagacatgtcaaacttatggcatgatgcgcgagttcattttgctcaaatctatttctcaggattttattgctgtctttggtgacaagaagctccaataccaacatgtccgtcgcctttgtctccaaaacaatagtgctgtagatagcagcaatcttgacatcgatttgactcttgtccgatctctggtagtctttgggaaagcaggtaaagctattttggatttcaagaagtatcaactgcttcgagtcttagatcttgaagaatgtactgacttggacgatgatcatctcattcaagtgtgcaacctttttcttctaagatatttgagccttgggggcaaagtcaccaaacttccagaagagataactaaactgaaacttttggagacacttgatcttaggagaagaaaggaggtgactatcaacctgtcaacagaagtcatcaagctaccatatttaattaatctgcttggaaagtttaagctcctaaataaagccaagagattgaacgaactgcagaagtttttgtccgaaaactgtagattgcagacactagcaggatttagcacagacggaagtgaaggatttccagaacttatgggccacatgaagcaattgagaaaggtgaaagtttggtgtactgaactatcagcaagtagttctgggtttactaatcttcaaaatgccattcaaaaatttatacatgacgaacagaatggattcaacgatcctcgctctttgtcgcttaactttgataattgccctgaagacttcctctacgagataaaagccccatgctaccttcgatcgttgaaattacatgctaaattactggaatcgcccaaatttgtggtactattgcgtggcctccaggagttgtgcatttcatcatcagctacaaaattgaccacaggtcttctttcagctttgagtaacctgaggaaattgaagtatctcaagctgattgcagatcaacttgaggagttcattattaaggataatgcattgccaagcctgctaagcctatgttttgtgctgaaccgtcctacattcccggtaatcaaaggaaatgctttgaggtttctcaaatcactccagcttctctgtaaaaatctagttggcctttcagagatcaacattaattgtctcaaacgccttgaggaagtcgttcttcatccatgtgtgaacaaagcaactaaagttacatgggaaagggcagctaaggaacatcccaataggccaaaagttttggtgcttgaaaaggttgatctagcagatggccatgaagaagattcagattcgaccccaactgaaattgtgacaaataaggaatctactgttgcaggaaatggagcagatattgacaaacagaactatattgacaaacagaactatcctaccagtaatatgtcacgtgcaatggtttcccctgctttgactgagccatgcagcgctgggaatggtgtggagtcctcttgtgcctgacgacacggtcagttttgtggaataattcccttctctgttcttattgcaacaaagtgaaacaaaatttgcgaaagaattctactgaattgaatatggaataaatttgcaaaaaaaattcttctttattaaatctgtacagtatttttttctgtaaagttcaagtttacaggttatcaaaagataaaagtaagaaaattttggacaacaatacaaatggatttgtattccccaaaatttcaagtgcttatatttgttagtttccatcaatcagcactttaggctgactctatgtttccaacttgacatattcatgctatcgtaattggaacctacaaatttgatacgccttctgatttcaaatataatttgtttttgatgagcacatgaatagaaaatttatcttcaaattactttgttacatctatttatactagatcggaaaatatgccatctctttgagagtgataggatttattttatttggtgtggctaaatatggaagaaaaaggatgaaaaagtgtccatgttataaaattacttagtaaagatttttttacttagtaaagagttgagagtgctaaaacaacttgtatttacattagaaatcagaaagagtaataatctagttagttgcagtttctttaaaccaatagttgcatttacgatcaactgaaattaatcttgccatgtaaattgcaagctgcttatgctgtcgctgatgattaatccgtatggcttctgttttcttttatttttaaacaaatgcttagccggattatgtgtatgtgtacctttttctttatatttctctatccaattttgtccaatactgctacagttgggccttgctttagtactcctcccaggaaaaacttagcagatcttacagctcctaagaaaaggttttcgcacccatatcccaactgaacaccaacgcgctatttgcatctaaagttgtaagcatttcatgtcttagaagtagttggacgactcagccaccaacctagcattgatgactagaaaacagctttgaccttaagtagctactagttcaaatcttttgttttttcaaaacctgttttcatgctcagtttggctcttctttctcaagagaaataaccctgtttctatatcagtgactataaaaatcagggtttgtgtgaatacaaagcggttagaaaacatattggaggagtggttttgcagtgctcttactctctaactgatcaactgtgaaactttgttcattgagatcttttacagtacttggaaggtacctccttaaccaattgatacccatcattaattcatttttttcgataacttctaactgggctcactcctggcctctgcatgaaatgcacacagctacaaaacaggatctaactagactctcaacacaaaactaagaaattagtgactatcaagccgaagactagatcgccacccatgctctagggtaaaaaactcatgtaccacctgatccaaacaacgcgataccaccacaatacctgaagacccggtttgtggaggatagacctggtgcgtagccacctggtgactaaagcaataacctgcaaaggagaagataccatcttattatcaaaaattgccccgtttcagcttagccaaatggaccaacaaatagctgttgcacccatcaaaagcagatttctcatatccttaggaacacatgtaaaccaacgcccaaacatatgattaaaattttgaggatgttgtaagttataagccatatgaatcacggatcaaaccaaacgagtaacatgacattggaagaacaaatgttggatggtttcgtccttatgacagaagcaacgtttcttattacctttccactttcgcttagctagattatccttggttagaattatgccccgacgtaagtaccaaaagaaaatctttactttgagcaatacttttaccttccaaatacatctatttatattcgggatgcccgtatggacaagagctaagtaatgagaattgaccgaaaagatcccattgggggtgagattccatcgaaattcatcttgctcctgtgccaacaccaaatcagctatgcgaggccataaattgtgccatgcggctaattttgctccgattaaatctcgtctccatgaaaagcttggaggattgttttgaaagatttatgagatagtcgattgtttatgccttgctatgttatagagacaaggatattaatctctcaacgaggcattacccaaccatttatcctcccaaaaccttatttgagagctttccctaatacgaaaggacctaaacctaagaaaatcttgtttggctttcataaggctagcccaaaaatatgagtcccccgcttttcaaaaagcctgagataaaggttgcgatcccaaatatttattacgtagcatatcttgccataattttggaacagaaaatagtattaataagggtagcttagtaattgctcaatcccagttccccattccctgcctagcggcatcatgccaaagtggtgaagtcctaagtagacttactatgttttcaaccacacacaacccacctaaggcacgttgtgtcatgttatatggaataccatttgttgattggtaagtgttgtatacttgtgtttcatggtgagattaatacaagaactactagggaaaagtttcatttgtagtcatgtgtgcaacattgctagaaaaatagtaactgtactgtaattgcgaagccaaaaggaaatcgaagcaagttatacatgctgcagggcactttagttaatatatgtaccttaattagctgaaaatctctttatccaaatatagtatcatgacggccattttgattttgcagtacattggaagagttgtttgtggattgtcattgctctgagctgatttactgtgttggtacatggtactgctagttctgttgactagaatctcagaaacaaatacggctcatttcaacgttgagaagatatattgacgacatttggttgcttccgttgcaatatctgtgctcctttgtacttcaattgcaatttgcaaggtttgtctttcttcgattcaaatcactggacatctgtctggtcaatttgcaaggtttgtctttcttcaattcaaatcactggacatctgtctggtcaaaatgaagttcaccatgttgttctttgttgttagtgcttgtaattgttgtaacatattcagaaacacattgttgtaccttgtgctaagtgagaaactatatttttgttgt</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0226700, RefSeq:Os11g0226700