Os11g0235500

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Revision as of 09:05, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0235500| Description = Similar to Herbicide safener binding protein| Version = NM_001074098.1 GI:115484844 GeneID:4350148| Length = 1519 bp...")
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Gene Name

Os11g0235500

Description

Similar to Herbicide safener binding protein

Version

NM_001074098.1 GI:115484844 GeneID:4350148

Length

1519 bp

Definition

Oryza sativa Japonica Group Os11g0235500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:7198279..7199797

Sequence Coding Region

7198279..7198578,7198961..7199797

Expression

GEO Profiles:Os11g0235500

Genome Context

<gbrowseImage1> name=NC_008404:7198279..7199797 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:7198279..7199797 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgggtcaagctaacacaatacaggttcccaccgacgctgagctgctgcaagcacaggccgacctatggcgccacagcttctcctacctcacggccatggcgctccgctgcgccgccaagctcggcatccccaccgccatccaccgcctcggcggcgaggaggcggcagcatccttgcccgatctcatggcggccttgtccctcccggcgagcaagcaaccgttcgtccgccgcctcatgcggctcctcgtcgccgtcggcgtcttcgccgccgacggcgtcgccgacgagcgctaccgcctcaccccgctgtcccgcatcctcgtcgacggcgtcgccgccgccgacgaccaccaccacgacgttctccagacgcccttcgtcctcaccgcgacgtcgcggcagtacgtcgaggcggcgctgggggtggacgagtggctgcggaaggacgcgccgccggcgccggcgccggtgccgtcgccgttcgaggacgcgcacggcgcgccgctgttcgacgaggccaccgcggcggccatcgacccggagttcgccgcggcggcggacgacgccctggcggcgcacgacagcctcgggatcggcgccgtgctgagggagtgcggcgacctcctccgcggggtggcgtcgctgaccgactgcgccggcggcgacggcgcgacggcgagggccatcgccgcggcattcccgcacatcaagtgcacggtgctggacctcccgaaggtgatcgacaaggcgccggtggatgatggcgtggttaactatgttgcaggtgacatgtttcatgctgtcccacctgctcaagccgtgcttctcaagcttgtactgcatttttggagcgatgacgactgcgtgaagatcctgtcccagtgcaagaaagccatcccttcacgaaaggagggagggaaggtgatcgtcatagacatactgatcgagccttcgctggggccagcgatgctcgaaacccagctgctgatggacatggccatgatggtcaacaccagaggccgacagcgagacgaaagcgagtggcgagacctgttcttcagagctggattcagtgactataagatcgccaagaagctcggagctcgagctgtgttcgaggtctatccatga</cdnaseq>

Protein Sequence

<aaseq>MAGQANTIQVPTDAELLQAQADLWRHSFSYLTAMALRCAAKLGI PTAIHRLGGEEAAASLPDLMAALSLPASKQPFVRRLMRLLVAVGVFAADGVADERYRL TPLSRILVDGVAAADDHHHDVLQTPFVLTATSRQYVEAALGVDEWLRKDAPPAPAPVP SPFEDAHGAPLFDEATAAAIDPEFAAAADDALAAHDSLGIGAVLRECGDLLRGVASLT DCAGGDGATARAIAAAFPHIKCTVLDLPKVIDKAPVDDGVVNYVAGDMFHAVPPAQAV LLKLVLHFWSDDDCVKILSQCKKAIPSRKEGGKVIVIDILIEPSLGPAMLETQLLMDM AMMVNTRGRQRDESEWRDLFFRAGFSDYKIAKKLGARAVFEVYP</aaseq>

Gene Sequence

<dnaseqindica>1220..1519#1..837#atggcgggtcaagctaacacaatacaggttcccaccgacgctgagctgctgcaagcacaggccgacctatggcgccacagcttctcctacctcacggccatggcgctccgctgcgccgccaagctcggcatccccaccgccatccaccgcctcggcggcgaggaggcggcagcatccttgcccgatctcatggcggccttgtccctcccggcgagcaagcaaccgttcgtccgccgcctcatgcggctcctcgtcgccgtcggcgtcttcgccgccgacggcgtcgccgacgagcgctaccgcctcaccccgctgtcccgcatcctcgtcgacggcgtcgccgccgccgacgaccaccaccacgacgttctccagacgcccttcgtcctcaccgcgacgtcgcggcagtacgtcgaggcggcgctgggggtggacgagtggctgcggaaggacgcgccgccggcgccggcgccggtgccgtcgccgttcgaggacgcgcacggcgcgccgctgttcgacgaggccaccgcggcggccatcgacccggagttcgccgcggcggcggacgacgccctggcggcgcacgacagcctcgggatcggcgccgtgctgagggagtgcggcgacctcctccgcggggtggcgtcgctgaccgactgcgccggcggcgacggcgcgacggcgagggccatcgccgcggcattcccgcacatcaagtgcacggtgctggacctcccgaaggtgatcgacaaggcgccggtggatgatggcgtggttaactatgttgcaggtgacatgtttcatgctgtcccacctgctcaagccgtgcttctcaaggtataaacatgggagttaattaattatataacttgccattacccaaattttactacaaaacaaagttaatactccttctgtccctaaatatttgacgctgttaacttttataaacttgtgtgccaaatcgatgcaaaaccagcacaacgtactataatgtaatttgcgcattatagttgaatcaaatgaagctcaaaattaattttaagccaacaagtgaaatttaaatagtctcattatttagttgaataaaaatgggccaacttttacctgtaggctgattcttgcgcttctctccccaaatattatattacactattaattaatttaagtacacccttccataattaacattgtccaactatattatctatacttttagcttgtactgcatttttggagcgatgacgactgcgtgaagatcctgtcccagtgcaagaaagccatcccttcacgaaaggagggagggaaggtgatcgtcatagacatactgatcgagccttcgctggggccagcgatgctcgaaacccagctgctgatggacatggccatgatggtcaacaccagaggccgacagcgagacgaaagcgagtggcgagacctgttcttcagagctggattcagtgactataagatcgccaagaagctcggagctcgagctgtgttcgaggtctatccatga</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0235500, RefSeq:Os11g0235500