Os11g0238700

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Revision as of 09:05, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0238700| Description = Disease resistance protein family protein| Version = NM_001074107.2 GI:297611533 GeneID:4350158| Length = 3370 bp| ...")
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Gene Name

Os11g0238700

Description

Disease resistance protein family protein

Version

NM_001074107.2 GI:297611533 GeneID:4350158

Length

3370 bp

Definition

Oryza sativa Japonica Group Os11g0238700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:7406772..7410141

Sequence Coding Region

7406772..7407604,7408182..7410141

Expression

GEO Profiles:Os11g0238700

Genome Context

<gbrowseImage1> name=NC_008404:7406772..7410141 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:7406772..7410141 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggaggggttgtcgagcagatcgtggtgagcgccctaacgggggcgatgagccctcttctcagaaaactcaccaacctcatagagaagaagtacatggaggtcaagggcgtgaggaagaagctggaacagctcacgaaggagctaatgaccatcggcatcgcgctggagaagtacgcggccatggacagtccagacgtgcaggtgaaggcctggatggcggagatgcgcgagttggcctacgacatggaggatagcatagatctcttcacctaccgtatcgaccatgagccagctgacacaaccaatggagtcaagagggttctccacaagaccctccgcaaggtgaagaagtttcatcatcgccacaagtttgctaaggaaatcgaggaacttcatgttcttgtaaatgaagcgtacgaacggcaaaagaggtataggattgaagagggcacttctagcaaattgtgtagggagattgatcctcggctacctgccctttatgtggagaaggaaaaactcgtgggcatccagggtccaatgaaggaaatcatcaattggtttggtagtgaggaagtggagccaatagggcagcgtaagattgtctctattgttggacaaggaggtttaggaaagactactctcgctaaccaggtgtatcagaaaattaaaggtcaattctctttttcagcttttgtgtctgtatcgcaaaagcccaacatggataaccttctaagggagttgctttctcaaattaagagcaatgaaccaacggaatcatatagtgatcaacaacttatcgacaaactaagaacatgtctgaaagatgaacggtaccttattgtgattgatgacatttggaaaaggtcagcatggaaaacaatacaatgtgcttttcctataaacaagcacgcaagtagaataatcacaacaacgcggatcaaaagtgtagctcaatcttgctgcggcgcttcagatgagggctttgtctaccagatgaaacctcttaacaaaagtgactctgaaaatttatttctcacaaggacttttggtgctgaaaaaaaatgccccagtcagctggaagggattatcagtgatatactttataaatgtgatggtttgcctttagccattattactatagctagcttgttagctgataaaccaagaacaagggaagaatgggagagagttctgaattatattgtttctactagtgagaaggataatgacctggaggtaatgaacaagatactgtttatgagttacaatgatctaccacatcatatgaaaagttgtttactgcacctcggtacgtttcctgaggatcacaagattggtaaggatgtgctggtatggagatggatagctgaaggattcataacaaaaaaacaaggctttactttgcaggaagttgcagagagttatttctacgagctgataaataggagcttggtccaacacatacagatcatgccaaatggagaagatggatgtcgagtccatgatatagttttgaacttcatcatccatcagtcaactgaagaaaattttttaaccaagttggattgtcaggatcacccatcttcacgtaaacggattcgccggcttttagttgggaacaaagaagaatatacaagggcaaaatcacaaggaaccatgaattcgtctaaccttcgttcaattaacatataccatgttgatggccatatgatgtctcctcttttaaacctacctactcttcgagtgttgaatctagagcgttgtgatctcaggaatagttatcttgattgcattgtaggtttatttcacctaagatacttggggctccgttggtcaagaattgactgcctacctgtccaaattgggaagctagagtatctgcaaacactcgatttacgccatacttcattattagtgatgcctgaaagtattgttcagctcaaacggttgatgcgtcttgttggacatcatctcatattaccggatgggttcggtaacatggaatctcttcaagaattagggtttttaggttgttgtagaagctccacaaatttattaaaatttcagaaagatctacaacttttgagaaatttgagggtgctcaaagtaaggttcttgtctgaaggggaaacaggaaaagaagcaatgataccatccctttgcaagcttggaggaaacaacctccgggaagtctatattaccagctgcaatggaagtggagattgtttcgcagattcttggtgtccttcgccgtgtttcctggaaaagtttgtttacaagagtagttgcaatatacattacttttccaggtttccgaagtggattcatcccacactctctagatgtctcacctacttggatatcgacgttaaacaaatggaacgagaacatgtacgtattcttgaagatttgcctgctcttattgtcctacacctagacataggggaagctctcgtgtatggaatcaggatcagccatggtgcattccaatgtttggcacgcctacgtttctgcaacagatctggacctggtttggtattcaaaggaggcatgccaaagctcgaatggcttagcgttgaattcggtgcagagagggcacaatcaacatatggcagtttagaggttggcatccggcacatcacatctctcaaacatatcgacttttctatcctggtgctcactgacgatatggagtggaaaatcaaatcatctataaatagccaagtcaagatgcttccacaacgtcctgaggtcaatatcaaaacagtactccttccatctataaaataa</cdnaseq>

Protein Sequence

<aaseq>MGGVVEQIVVSALTGAMSPLLRKLTNLIEKKYMEVKGVRKKLEQ LTKELMTIGIALEKYAAMDSPDVQVKAWMAEMRELAYDMEDSIDLFTYRIDHEPADTT NGVKRVLHKTLRKVKKFHHRHKFAKEIEELHVLVNEAYERQKRYRIEEGTSSKLCREI DPRLPALYVEKEKLVGIQGPMKEIINWFGSEEVEPIGQRKIVSIVGQGGLGKTTLANQ VYQKIKGQFSFSAFVSVSQKPNMDNLLRELLSQIKSNEPTESYSDQQLIDKLRTCLKD ERYLIVIDDIWKRSAWKTIQCAFPINKHASRIITTTRIKSVAQSCCGASDEGFVYQMK PLNKSDSENLFLTRTFGAEKKCPSQLEGIISDILYKCDGLPLAIITIASLLADKPRTR EEWERVLNYIVSTSEKDNDLEVMNKILFMSYNDLPHHMKSCLLHLGTFPEDHKIGKDV LVWRWIAEGFITKKQGFTLQEVAESYFYELINRSLVQHIQIMPNGEDGCRVHDIVLNF IIHQSTEENFLTKLDCQDHPSSRKRIRRLLVGNKEEYTRAKSQGTMNSSNLRSINIYH VDGHMMSPLLNLPTLRVLNLERCDLRNSYLDCIVGLFHLRYLGLRWSRIDCLPVQIGK LEYLQTLDLRHTSLLVMPESIVQLKRLMRLVGHHLILPDGFGNMESLQELGFLGCCRS STNLLKFQKDLQLLRNLRVLKVRFLSEGETGKEAMIPSLCKLGGNNLREVYITSCNGS GDCFADSWCPSPCFLEKFVYKSSCNIHYFSRFPKWIHPTLSRCLTYLDIDVKQMEREH VRILEDLPALIVLHLDIGEALVYGIRISHGAFQCLARLRFCNRSGPGLVFKGGMPKLE WLSVEFGAERAQSTYGSLEVGIRHITSLKHIDFSILVLTDDMEWKIKSSINSQVKMLP QRPEVNIKTVLLPSIK</aaseq>

Gene Sequence

<dnaseqindica>1..833#1411..3370#atgggaggggttgtcgagcagatcgtggtgagcgccctaacgggggcgatgagccctcttctcagaaaactcaccaacctcatagagaagaagtacatggaggtcaagggcgtgaggaagaagctggaacagctcacgaaggagctaatgaccatcggcatcgcgctggagaagtacgcggccatggacagtccagacgtgcaggtgaaggcctggatggcggagatgcgcgagttggcctacgacatggaggatagcatagatctcttcacctaccgtatcgaccatgagccagctgacacaaccaatggagtcaagagggttctccacaagaccctccgcaaggtgaagaagtttcatcatcgccacaagtttgctaaggaaatcgaggaacttcatgttcttgtaaatgaagcgtacgaacggcaaaagaggtataggattgaagagggcacttctagcaaattgtgtagggagattgatcctcggctacctgccctttatgtggagaaggaaaaactcgtgggcatccagggtccaatgaaggaaatcatcaattggtttggtagtgaggaagtggagccaatagggcagcgtaagattgtctctattgttggacaaggaggtttaggaaagactactctcgctaaccaggtgtatcagaaaattaaaggtcaattctctttttcagcttttgtgtctgtatcgcaaaagcccaacatggataaccttctaagggagttgctttctcaaattaagagcaatgaaccaacggaatcatatagtgatcaacaacttatcgacaaactaagaacatgtctgaaagatgaacggtaagtttacttgagttactttctatcgtgtgctttcatacgggttcttatattctagtcatcattaatcaacccgtgcatctctcagcctgtagctagattaatataaaaagaacattcaaagttcttttcatttggaattttcattaaagtttcttgttggaattttctatcgtggtctctcctacacatcgatttatatccatgccctgcatagtggtggtagccttttgtttttattttgtttctaccaatgatgaagttatattccttcaaataatcaaaattatttcaggctgaaattaaccaacacaaaatgtagtacaacttttgcatgcagagatagttttacatgtatatagattgttcacatgtacgtatgcaaaaatgagaatgaggatcccctgtacagtttgcatttatgccactgacatgtagaccataccaaagtgaggcccacatgtcagtggcacaactgcaaactgcataaagtcaggggatctgtttcccaaaaatgaatatgggtgcatttattagcctacaaatgattcatactgcttcacaaacttgcttataggtaccttattgtgattgatgacatttggaaaaggtcagcatggaaaacaatacaatgtgcttttcctataaacaagcacgcaagtagaataatcacaacaacgcggatcaaaagtgtagctcaatcttgctgcggcgcttcagatgagggctttgtctaccagatgaaacctcttaacaaaagtgactctgaaaatttatttctcacaaggacttttggtgctgaaaaaaaatgccccagtcagctggaagggattatcagtgatatactttataaatgtgatggtttgcctttagccattattactatagctagcttgttagctgataaaccaagaacaagggaagaatgggagagagttctgaattatattgtttctactagtgagaaggataatgacctggaggtaatgaacaagatactgtttatgagttacaatgatctaccacatcatatgaaaagttgtttactgcacctcggtacgtttcctgaggatcacaagattggtaaggatgtgctggtatggagatggatagctgaaggattcataacaaaaaaacaaggctttactttgcaggaagttgcagagagttatttctacgagctgataaataggagcttggtccaacacatacagatcatgccaaatggagaagatggatgtcgagtccatgatatagttttgaacttcatcatccatcagtcaactgaagaaaattttttaaccaagttggattgtcaggatcacccatcttcacgtaaacggattcgccggcttttagttgggaacaaagaagaatatacaagggcaaaatcacaaggaaccatgaattcgtctaaccttcgttcaattaacatataccatgttgatggccatatgatgtctcctcttttaaacctacctactcttcgagtgttgaatctagagcgttgtgatctcaggaatagttatcttgattgcattgtaggtttatttcacctaagatacttggggctccgttggtcaagaattgactgcctacctgtccaaattgggaagctagagtatctgcaaacactcgatttacgccatacttcattattagtgatgcctgaaagtattgttcagctcaaacggttgatgcgtcttgttggacatcatctcatattaccggatgggttcggtaacatggaatctcttcaagaattagggtttttaggttgttgtagaagctccacaaatttattaaaatttcagaaagatctacaacttttgagaaatttgagggtgctcaaagtaaggttcttgtctgaaggggaaacaggaaaagaagcaatgataccatccctttgcaagcttggaggaaacaacctccgggaagtctatattaccagctgcaatggaagtggagattgtttcgcagattcttggtgtccttcgccgtgtttcctggaaaagtttgtttacaagagtagttgcaatatacattacttttccaggtttccgaagtggattcatcccacactctctagatgtctcacctacttggatatcgacgttaaacaaatggaacgagaacatgtacgtattcttgaagatttgcctgctcttattgtcctacacctagacataggggaagctctcgtgtatggaatcaggatcagccatggtgcattccaatgtttggcacgcctacgtttctgcaacagatctggacctggtttggtattcaaaggaggcatgccaaagctcgaatggcttagcgttgaattcggtgcagagagggcacaatcaacatatggcagtttagaggttggcatccggcacatcacatctctcaaacatatcgacttttctatcctggtgctcactgacgatatggagtggaaaatcaaatcatctataaatagccaagtcaagatgcttccacaacgtcctgaggtcaatatcaaaacagtactccttccatctataaaataa</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0238700, RefSeq:Os11g0238700