Os11g0242800

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Revision as of 09:06, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0242800| Description = Similar to ASCAB9-A (ASCAB9-B) (Fragment)| Version = NM_001074125.1 GI:115484898 GeneID:4350176| Length = 2480 bp| ...")
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Gene Name

Os11g0242800

Description

Similar to ASCAB9-A (ASCAB9-B) (Fragment)

Version

NM_001074125.1 GI:115484898 GeneID:4350176

Length

2480 bp

Definition

Oryza sativa Japonica Group Os11g0242800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:7661629..7664108

Sequence Coding Region

7661719..7661917,7662030..7662114,7662659..7662709,7662810..7662930,7663038..7663172
,7663605..7663865

Expression

GEO Profiles:Os11g0242800

Genome Context

<gbrowseImage1> name=NC_008404:7661629..7664108 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:7661629..7664108 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcgctcgccccgtccaagatgctcggcacccggctcaacttcgccggctcctcccgctacgccaccgcggcaccgaccaccggagcgcagaagatcgtctccctcttcagcaagaagcccgccccgaagcccaagcccgccgccgtcacctcctcgagccccgacatcggcgatgagctcgccaagtggtacggccctgacaggaggatcttcttgccggagggtctcctggaccgctcagaggtgccggactacctcaacggagaggtccccggagactacggctacgacccttttggcctcagcaagaagccagaggacttctccaagtaccaggcctatgagctgatccatgccaggtgggcgatgctcggcgccgctgggttcatcatccccgaggcctgcaacaagtttggcgcaaactgcggccccgaggccgtctggttcaagaccggcgccctcctcctggacggcaacaccctcaactacttcggcaacagcatccccatcaacctcatcgtcgccgtcgccgccgaggtcgtcctcgtcggcggcgccgagtactaccggatcatcaacggcctggatctggaggacaagctccacccaggtggcccattcgacccgctggggctggcgagcgacccggaccaggcggcgctgctgaaggtgaaggagatcaagaacgggcggctggccatgttctccatgctggggttcttcatccaggcctacgtcaccggcgagggccccgtcgagaacctctccaagcacctcagcgaccccttcggcaacaacctgctcaccgtcatctccggcgccgccgagaggacgcccagcctgtaa</cdnaseq>

Protein Sequence

<aaseq>MAALAPSKMLGTRLNFAGSSRYATAAPTTGAQKIVSLFSKKPAP KPKPAAVTSSSPDIGDELAKWYGPDRRIFLPEGLLDRSEVPDYLNGEVPGDYGYDPFG LSKKPEDFSKYQAYELIHARWAMLGAAGFIIPEACNKFGANCGPEAVWFKTGALLLDG NTLNYFGNSIPINLIVAVAAEVVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLASDP DQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGPVENLSKHLSDPFGNNLLTVISGA AERTPSL</aaseq>

Gene Sequence

<dnaseqindica>91..289#402..486#1031..1081#1182..1302#1410..1544#1977..2237#aaacgcccaccacagtctccccctttctgaacacagcaccaccccttctgctgcatctcccacctccctctgaattgtgggcctgaggcgatggcggcgctcgccccgtccaagatgctcggcacccggctcaacttcgccggctcctcccgctacgccaccgcggcaccgaccaccggagcgcagaagatcgtctccctcttcagcaagaagcccgccccgaagcccaagcccgccgccgtcacctcctcgagccccgacatcggcgatgagctcgccaagtggtacggtgagtgaaattgctaaatctgacggctgaaaattttgtgttccaagaaatttttaaatgtaaaattcagaatcttgtcggtttgaaaattttgccttgtttttgttgtcaggccctgacaggaggatcttcttgccggagggtctcctggaccgctcagaggtgccggactacctcaacggagaggtccccggagagtaagtcacaagctcccatttttcgctgtcttttgctgtagtttcaagaaaaaagtttagatctttttgtgtggaaaaaatccagacctttttgtaggcagtacaagttgggaatttgaaaccaggtgaaatgctagtacaggttgtaaacattgtagcatcaactgggaaattagtggagaaaatagagtacaaatgaaattaggacttctcattggagaaggaatagttttgtcccgaattgcattttgttttcatgttgtataggaaaatattgctgtttagtttagctgttccataaaatcaaaagagcacggactatctctgaaacaaactagcatctgaattttcaggtgctcaattccccaatcttaaagagcaattttcacctaccaaaagttcgatattgttcttcacttttagttgtacaagtagcatgatgttgccactccactaatagcacaccaacatgaacaaaatgctcatgaaaatgtaggtttcttaatgcaactaaactaaattatcatgccctttgaacttgcagctacggctacgacccttttggcctcagcaagaagccagaggacttctccaagtaagtagcagcgttcaatcctcaaattcttcttcttttcagactcaaattttcagattcttgtatctgagtaaaatctgacaaaattttcaccctgcaggtaccaggcctatgagctgatccatgccaggtgggcgatgctcggcgccgctgggttcatcatccccgaggcctgcaacaagtttggcgcaaactgcggccccgaggccgtctggttcaaggtgcgtgtactagccactgatcatcggcaattcagctaattcgctgatcactcaagctcaatacctgaatctctgaactgaagtgaactcactcatggtatatgcagaccggcgccctcctcctggacggcaacaccctcaactacttcggcaacagcatccccatcaacctcatcgtcgccgtcgccgccgaggtcgtcctcgtcggcggcgccgagtactaccggatcatcaacggcctggtcagtcaactgcacaatctacacgccctactcttacaccttttggttttcggtagcacgctttccaatttattaaatgctatatctcgtacgaaaactttgtatatgaaaattgctttaaaatatccttttccaaatctaaaataattaaaacttaattagtcttacattttttttgtttccggtagcacgctttccaatttgttgaatggtgtatttcgtacgagaactttttatataaaaattttaaatcctctttcaaacttaaagtaattagaactcaattaatcaaacgctaatagctttctcatttgaagtacccttaatttatcttcgatgaactcaaacacgggaccttagttagtctacacttgttgattttgctcgctgatactcaccggagattcgccggcgatggcgatggtggtgcaggatctggaggacaagctccacccaggtggcccattcgacccgctggggctggcgagcgacccggaccaggcggcgctgctgaaggtgaaggagatcaagaacgggcggctggccatgttctccatgctggggttcttcatccaggcctacgtcaccggcgagggccccgtcgagaacctctccaagcacctcagcgaccccttcggcaacaacctgctcaccgtcatctccggcgccgccgagaggacgcccagcctgtaaacatctcgccgccggcgacgctggctggcctcaagttaattttaatcttacccgggaagaagaagggaggagtttgagaagggtggaagaatgtgttaaatgtacgtgtaaattatcgtcgagttgggagatgaatttgaaaacctgttcattctgatcttctgataggaaggaccaagtgtttggatttgtggctgagaaatatttgctacctgagtaaattgtctcgaagtggttttcatc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0242800, RefSeq:Os11g0242800