Os11g0244900

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Revision as of 09:06, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0244900| Description = FAR1 domain containing protein| Version = NM_001189527.1 GI:297728184 GeneID:9271013| Length = 3099 bp| Definition ...")
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Gene Name

Os11g0244900

Description

FAR1 domain containing protein

Version

NM_001189527.1 GI:297728184 GeneID:9271013

Length

3099 bp

Definition

Oryza sativa Japonica Group Os11g0244900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:7787277..7790375

Sequence Coding Region

7788416..7790167,7790181..7790375

Expression

GEO Profiles:Os11g0244900

Genome Context

<gbrowseImage1> name=NC_008404:7787277..7790375 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:7787277..7790375 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ttcgccggcgtcccattctcctctcctctcgccgccggccgccgccgcctcgccctcctcccctcaccggcaacgaatctcccctcctcctcctcgaactgcggtcatgccgctgggcgccgcgggcgacgaggatgcggcggcggtcacgggcccgtcctccgcgggggagccggcggcggggatggagttcgcgcgagggcgttctactgcacgtacgcggcgcgggcggggttccgcgtccggagcagcaagtcgttcgcgtcgcgcatcgacgacgccatcatcatgcggcgcttcgtgtgcacccgccagggcctcccctcccgcaaggacaccctcctcgacgcctccaagaagcgccgcaaccgcgcctccgcccgcgccgcctgccccgccatgctccaggtcaaccgccgcccttcctcccgctggctcgtctcccgctgcgtcctcctccactcccaccccctcgcctcctcctcctcctccgccgacgccgcagccaccgacgcggccgagcccaacgactcctcatcggccgaacaggatggcggcgccgcggcggcggccgcggcgctggcgccgggaggcggcgtcgcgcaggggctcctcgaccacttcaggaagctgcagctggacaatccggccttctgctacgccgtccagatcgaccggagcggctgcattgccaatttcatctgggtggatgcgcgcgcgaggtcactgtaccgacggttcggggacgccgtggtgctcgatctcacctgcaggaggaaccgccgcgccgtgccgttcgcggcgttcaccgggatgaaccatcataggcaggctatcgtgttcggctgcgccctcatgaccgacgagagcgagaattccttcgcgtggttgttcgagacatggcttgctttcatgggtgggaagaagccgatgtcgttcacgatcggttacagtagagatgtcgagatggctgccatgaaggtctttggtggtgatgttaggcaccggttttgccgacgggacatcttcttcatctgcaagcagaaattggccagtttgtattcggagcattcgacactgaaagatgaattgaaggaatgtgtaactgaattggaaaggatcgatgagttcgagtcgacttggaggatgttgcttagcaaatacaatcttttcgggaacgagtggttgcaaacaatatacagtatccgtcaccagtgggtgcctgcctatctgaaggatagcttctttggtgagataatcaatgccccgaagttggagacgatgttcaagttttttcagaggagctccatcactaccactaccctgcgagatattgcatttcagtttgataaggctatagcaagggattatcaaactgaactccaggaagactttgcgactttcagtagcaagccggtaatgaagtcttcacatccaatggaaaaacaagcatcagagctctacaccaaagttatgtttgacttgtttcaggatgagcttattgaatcatcggggtttttggtgcagaatgttgaaagtggggacataagcagatttgaggtaacacaatctgaaaatgccaatataagatacactgttctttatagtgaaccacgtgcgagcgtatcttgcagttgtcacaaatttgagtttgctggtgtgctgtgccggcatgcactaagggttttgacagctattggcataccagtgcttcctgaaaattatattttgaagaggtggacaagaaatgccaagaacaacatattatctcaagttccggcaaacacaaaagggtctttggcttggcggtgtaatgatttgtgccgtgatggtatcagatttgcagaggaaggtgcaacatctgaggagatttacaaaactgccaaggaggctttgcagaaggcatttgctgagattttgcctcaaagtgaagcccatctaaaataa</cdnaseq>

Protein Sequence

<aaseq>FAGVPFSSPLAAGRRRLALLPSPATNLPSSSSNCGHAAGRRGRR GCGGGHGPVLRGGAGGGDGVRARAFYCTYAARAGFRVRSSKSFASRIDDAIIMRRFVC TRQGLPSRKDTLLDASKKRRNRASARAACPAMLQVNRRPSSRWLVSRCVLLHSHPLAS SSSSADAAATDAAEPNDSSSAEQDGGAAAAAAALAPGGGVAQGLLDHFRKLQLDNPAF CYAVQIDRSGCIANFIWVDARARSLYRRFGDAVVLDLTCRRNRRAVPFAAFTGMNHHR QAIVFGCALMTDESENSFAWLFETWLAFMGGKKPMSFTIGYSRDVEMAAMKVFGGDVR HRFCRRDIFFICKQKLASLYSEHSTLKDELKECVTELERIDEFESTWRMLLSKYNLFG NEWLQTIYSIRHQWVPAYLKDSFFGEIINAPKLETMFKFFQRSSITTTTLRDIAFQFD KAIARDYQTELQEDFATFSSKPVMKSSHPMEKQASELYTKVMFDLFQDELIESSGFLV QNVESGDISRFEVTQSENANIRYTVLYSEPRASVSCSCHKFEFAGVLCRHALRVLTAI GIPVLPENYILKRWTRNAKNNILSQVPANTKGSLAWRCNDLCRDGIRFAEEGATSEEI YKTAKEALQKAFAEILPQSEAHLK</aaseq>

Gene Sequence

<dnaseqindica>209..1960#1..195#ttcgccggcgtcccattctcctctcctctcgccgccggccgccgccgcctcgccctcctcccctcaccggcaacgaatctcccctcctcctcctcgaactgcggtcatgccgctgggcgccgcgggcgacgaggatgcggcggcggtcacgggcccgtcctccgcgggggagccggcggcggggatggagttcgcgtcgccggaggaggcgagggcgttctactgcacgtacgcggcgcgggcggggttccgcgtccggagcagcaagtcgttcgcgtcgcgcatcgacgacgccatcatcatgcggcgcttcgtgtgcacccgccagggcctcccctcccgcaaggacaccctcctcgacgcctccaagaagcgccgcaaccgcgcctccgcccgcgccgcctgccccgccatgctccaggtcaaccgccgcccttcctcccgctggctcgtctcccgctgcgtcctcctccactcccaccccctcgcctcctcctcctcctccgccgacgccgcagccaccgacgcggccgagcccaacgactcctcatcggccgaacaggatggcggcgccgcggcggcggccgcggcgctggcgccgggaggcggcgtcgcgcaggggctcctcgaccacttcaggaagctgcagctggacaatccggccttctgctacgccgtccagatcgaccggagcggctgcattgccaatttcatctgggtggatgcgcgcgcgaggtcactgtaccgacggttcggggacgccgtggtgctcgatctcacctgcaggaggaaccgccgcgccgtgccgttcgcggcgttcaccgggatgaaccatcataggcaggctatcgtgttcggctgcgccctcatgaccgacgagagcgagaattccttcgcgtggttgttcgagacatggcttgctttcatgggtgggaagaagccgatgtcgttcacgatcggttacagtagagatgtcgagatggctgccatgaaggtctttggtggtgatgttaggcaccggttttgccgacgggacatcttcttcatctgcaagcagaaattggccagtttgtattcggagcattcgacactgaaagatgaattgaaggaatgtgtaactgaattggaaaggatcgatgagttcgagtcgacttggaggatgttgcttagcaaatacaatcttttcgggaacgagtggttgcaaacaatatacagtatccgtcaccagtgggtgcctgcctatctgaaggatagcttctttggtgagataatcaatgccccgaagttggagacgatgttcaagttttttcagaggagctccatcactaccactaccctgcgagatattgcatttcagtttgataaggctatagcaagggattatcaaactgaactccaggaagactttgcgactttcagtagcaagccggtaatgaagtcttcacatccaatggaaaaacaagcatcagagctctacaccaaagttatgtttgacttgtttcaggatgagcttattgaatcatcggggtttttggtgcagaatgttgaaagtggggacataagcagatttgaggtaacacaatctgaaaatgccaatataagatacactgttctttatagtgaaccacgtgcgagcgtatcttgcagttgtcacaaatttgagtttgctggtgtgctgtgccggcatgcactaagggttttgacagctattggcataccagtgcttcctgaaaattatattttgaagaggtggacaagaaatgccaagaacaacatattatctcaagttccggcaaacacaaaagggtctttggcttggcggtgtaatgatttgtgccgtgatggtatcagatttgcagaggaaggtgcaacatctgaggagatttacaaaactgccaaggaggctttgcagaaggcatttgctgagattttgcctcaaagtgaagcccatctaaaataatcaggtattagtcaacttcttatgtcctgatcttttgtcttattcggcttgacaaatctggaatagtttgatgtgtcaaactgctgatgtggtgccatgtcttttggtgttgtcaacatttcagtaatcagttatatgcaaatgagataatttgtttgttgtaacttcaacattatttttcactaggtggcagacttataaggatcatgtccatgaacatgctgctgtcaccattcaggactgatgtggaactggatgcactttgccaaaagggcaactgcatagtttgtcattgtacatgttttttgccattttaagaggtatggacgtatcgactttgtcattgcttcatggtatgcatcaatttatatcatgttctaattcatcatcactctgcatgagcagaattacaggaagcaacaacataactgcactatgtcctccattagtcacccactcaaccacagcttcatttgaagagaaaagactctattactgtaccagaactcctatcgtttgcctcgttgtcaatgaagaaccaagaccatctgccatatggtccttgggctacatggggcacaaccgcacaagagagcagcaggaagaacagagatagggtccagatgggtcaattagctagcgcgtgcttgccaagtattagagagagaattcttgttatctcctagcttagaggtgcactccccttatgatttgattatcaaaatcctttatattatgaggatggagatagtagtttgtattatcatctgttcagaatcaagaacatgattaacctatttgccctacctgtctctccatcctgttatgctgctttgctgaacccctctttctctgtcttgtcattgcaactatcaaccaatcttttcaatcttctccaagacccccacttcctgcaccagctaccatcaccatctaccaaaaaaaccagcccttaactgacaacagtgacccccccataacatccactcatgtgaaaccaagatctgctgctgcatacatttggccctgcatggcaggctgcatgattggagaaattgtattcttgcaggctactgtgtagtagtatacatttggccctcacagctaacagcttgaaggtttgagcttcatgacacagc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0244900, RefSeq:Os11g0244900