Os11g0251400

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Revision as of 09:06, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0251400| Description = Ankyrin repeat containing protein| Version = NM_001074159.1 GI:115484966 GeneID:4350213| Length = 6591 bp| Definiti...")
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Gene Name

Os11g0251400

Description

Ankyrin repeat containing protein

Version

NM_001074159.1 GI:115484966 GeneID:4350213

Length

6591 bp

Definition

Oryza sativa Japonica Group Os11g0251400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:8165280..8171870

Sequence Coding Region

8165500..8166099,8166994..8167523,8167819..8168443

Expression

GEO Profiles:Os11g0251400

Genome Context

<gbrowseImage1> name=NC_008404:8165280..8171870 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:8165280..8171870 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagcctgtgcagccagtactgcaaccatagattgggagctcctggaagcggccatatctggtgataccaggtcaatgaagatgaagtacatggattcacatgatcctacaattctgcttggaaaaaatccacaaggaaacacatgtcttcatatatcttccatgtgtggccatttggaattttgcaaagatgttctttcacttccacaggatccaaccgtgaagaagaaactactcactactgtgaatgtgatgaatgagacgccactgcttactgccataacaagtggccatgttactttagctgcttttctactcaaatactgccatgaacaaggattcagtgaggtaatcttgaaacaggacaagcacaaatgtaatgcactgcaccatgccatttgcaacggccacaaggacctggcactggagttgatagcgactcagcctgccttgtccaaagatgtcaacaaatacggcgagtctcccatgtacattgcgttgatgatgagggattctaagtttacagatatttttgagaaactgttgggaattgatggttcttctcattcaggaacctatggctacaatgctctccatgcagctattagaaatggaaatccagatattgctaaaagaatcatcgttgaacgcccaaatctggccacagaagaaaataaggatggtaatactccaattcagctagctgtacgttggggaaagatcgacatgctacgagtattgttgaaacatgacagatctcaagggtatgttatcaacagaaaaaatggttatcctctcctcctttctgctgcacatcgaggtcatgttgctgttgcccgagagattatcaaatattgcccagatgctccatattgcaaaaaagatgggtggacatgtcttcataaagctgtcaaatcaggtaatatggaattcgttgagtttatccttggggaaccacgacttcagaaactcgtgaacatgcgtagcagcaaggggaaaacagctctacattatgccatccagaagtgtgatccgaaaattgttgctgctttacttgacaagaaaatagacttgacaattcttggcagtgacggtaatgcagccgcttgggaattacgggatgccttggatagtgcgaagacattaaactggaatgaagtgtcaatgcttatgattaaagctgatcctccaaatgcaaaatccgtttataatcttcacgaggaagccaaagaaaagttgatcaatgcgtcaaggaaggatgcaaggtcgctgactcaaacatacacaagcaacacttcgctagtggcgatcctcatcgcaacaattacctttgctgctgctttcaccctgcctggaggatacagcagtgatgctggaagccagggacttcctataatggcaaggaacgttgcctttaaggcattcttgatatcagataccttagcaatgtgcgcctcacttgctgttgcgttcatatgcatcatagcaagatgggaggatctcgatttcttgctttactacagatccttcaccaagaagcttatgtggttcgcgtacatggcaacaactacagcatttgcaaccggtttatacacagtattggcccctcggctgctatggttagctgttggaatttgctctgttgctgttttagtgccaattctcactaaggtgctcggggaatggcctgtcttaaagctcagaattcggttgggccaagctttcaaatcagagttccttgatatggtctga</cdnaseq>

Protein Sequence

<aaseq>MAACAASTATIDWELLEAAISGDTRSMKMKYMDSHDPTILLGKN PQGNTCLHISSMCGHLEFCKDVLSLPQDPTVKKKLLTTVNVMNETPLLTAITSGHVTL AAFLLKYCHEQGFSEVILKQDKHKCNALHHAICNGHKDLALELIATQPALSKDVNKYG ESPMYIALMMRDSKFTDIFEKLLGIDGSSHSGTYGYNALHAAIRNGNPDIAKRIIVER PNLATEENKDGNTPIQLAVRWGKIDMLRVLLKHDRSQGYVINRKNGYPLLLSAAHRGH VAVAREIIKYCPDAPYCKKDGWTCLHKAVKSGNMEFVEFILGEPRLQKLVNMRSSKGK TALHYAIQKCDPKIVAALLDKKIDLTILGSDGNAAAWELRDALDSAKTLNWNEVSMLM IKADPPNAKSVYNLHEEAKEKLINASRKDARSLTQTYTSNTSLVAILIATITFAAAFT LPGGYSSDAGSQGLPIMARNVAFKAFLISDTLAMCASLAVAFICIIARWEDLDFLLYY RSFTKKLMWFAYMATTTAFATGLYTVLAPRLLWLAVGICSVAVLVPILTKVLGEWPVL KLRIRLGQAFKSEFLDMV</aaseq>

Gene Sequence

<dnaseqindica>5772..6371#4348..4877#3428..4052#tcccctccaccagatctggccaagagcggcagcctggcaggaggggaggcgggggcggcggcggcgcctcccctccgccagatctggccgggagcagcggcctagcaggaggggaggcgggggcggcagtggtgggcggtggcggaagggaaggcgacggccccgcaggaggggactcggcgacggcccgacaggagtgttcatgtgcgtattcttgtgttcatgtgtgttcttgtgttcattttgtgtgttcatcttatgttcttaatgttcatgttgtgttcatctgttcttgaagtgaaattgctcgatgcatcgagccggctttcagtcatcattgccgccttggtggtgtctgttgggaaaaccggcacctaaggccggttcccaaccgacacctattagctttattttgtgtagtagtgaaaacatatcttttaactataattgtatattataatatgtaaaaagaggtaaatatttaatttttattaatataattttttaaaactaatctatatgtcatgctctagtgccttcaaactaagtattttaaacatgatcaatagtcaaagttctaattatttgtcattacccttatctaaaacatcaaaattctggttaccatttaaccctgctgaatatagtcgtacacccgttactctaacatcatctatctagtgcttccttgatgtctttcctccattattgcatcaacattttttttatattttgtttttagtggaaaccagctgctgatgaacatacaaaaccaaaaaagcgccagcatactgtgctgtacataccaagaagaagaaggagaagaggtaatgggcaacaacgtgcgggcaggcatcacgctcgatagaattaattgtttgaaacgatgatatgataagaacaagagggagaccaactgaccttaatccattattcatggaagcgtgaaggttacgtacttccgttgacatgaaacttcatagtatatatgtcgacctttcatctgcaatcaccaactaaacaccccagttaattggctgtcatctccgtcgtctctcacagcgagcattgtgctgcctgcgcaaggtacgtagggacgttcgtgttgttcagcacttcagctttgtcttactatttgatatgcttcatcgtcaggccgattcataaaatggtcgttacataaggacgcgtgtggcctgatatgtaggtacttcactgtttctccaaataatgtggaaatttatagtgagcacctaattagtaaagaataatcttttagacgatttagtatacaaagtattaataaaatggactgcaaaatttgctccgggacgttctagttttgtattttagttgttcaatgggaattaaattgctccggggtgattctcgtgtggggctcaaaattttgcaaaatttgctccgggacgttcaatgggaataaaaattttgcaaaaagatgattctgatcatataacagaactaatacaaaattagagtaagaccaaatcagcattttctgccccccatatacaaaattagaaaaggcgacgtagggtactgactatcaaggaggatctggcagagatacaacgatgggctaaccttagacatccgatgtcgtcactataagtgtcggaacagctaaaaccgacacctataatgcctttcccgcctatacaccccctccacatattaaatattcaaaaacctgcacctttatgtccaaatatgatttaaaaaccacggccgctccgccctagccctcccgccgctgtcggacctcgcttgccgccgtcattgctgacatgtgagatgagagagaagagaaggaggtgatagagagaagagaaataggagagctggcatgtgggtccaaatgcattttttacatttcacacgaaaactattattttaatggatgcggtgtccaccagaaaatatctaacttttgggtgtgttttccccctaaaagtcacttcgtcttgtgtcctatggctaaaaccgcaaagtcacggtgtgctgtagcaaaatttccaccaaattttagacaggtgcaatatgttgtcaacttgtgatccatttcagcccaattaagtaaggtagagaaaggcccattatattcctgccaataagcctagccaccaccagcagatgacccaccacgtccacgcaacgctcatcgaatcccctgctgccggcggccaccgcgtaggcacccacgccgatgagctccggccgtactccaccgcccaccggcaaatgccgaacggcggcgtccagggggatccggtcaacggcgacctggggttggccaacccacacccctctatgtaagttctggttcgttgaaatctaaggtggcgaactagtttttttttcttttttaatttatttttgaaggttgtatcttagttggttcatcctcagatgtgtttgaattcaatgatcaacaatcaatgtggacccgtagaataataaatcatggcgaagatgtaatcagttttgcatcctcattgtctaaataatcctagctctaacaatgcttgcggccctcgcgtttgataaatactttggttagaaaaaagctttcaattatgcgtgggagagcgatgcgtttatctgatctcaacactcaattgttgcggaattagttagatctcactttcaaattacggagataacgacaaaaagttatgtaacaaatatattataaacaatactcattttagatcttaaaatggtctttaaaaatacaagtttaacctctaattcatattgtaaaacatttaaattattgtagcattactaacctttttgaggcaaatatatgcatgagtttcatacatccaatctaaatattttaaatgaaattgatgttaaaagttttatagtttgacttcaaacatgtcctgaacaacttgttttcatgacattttgtttcaaaaaaaagaagttttcatgactcaaaggagtacatatttgcttaatcgttagaaacaaaatttatctgaagttcacatacgttttgcatttcagaaagaggtgtactgaaacaagtccccattaaccatttgttgcttgatatatgtccctgaacgttatccattgcatgaacactaccaataaaacttttactagcaatgtagtatagtttgaaagaactaaagaggccaagaatttttcttgtttaagttcatttcctaagtgtcacgtttaggattgtttgaacacttcttttcaattctttttgtgttcttcctgaaatttatgttccctgatcaagctctatagcaaaagacttgaagaggagactgaatagtgttatctctttcctctaaccttcatccatttttttcttttagggacttcatccaaagttgttgaaataaaagggagatcattctctatcctttccataagatagatggcagcctgtgcagccagtactgcaaccatagattgggagctcctggaagcggccatatctggtgataccaggtcaatgaagatgaagtacatggattcacatgatcctacaattctgcttggaaaaaatccacaaggaaacacatgtcttcatatatcttccatgtgtggccatttggaattttgcaaagatgttctttcacttccacaggatccaaccgtgaagaagaaactactcactactgtgaatgtgatgaatgagacgccactgcttactgccataacaagtggccatgttactttagctgcttttctactcaaatactgccatgaacaaggattcagtgaggtaatcttgaaacaggacaagcacaaatgtaatgcactgcaccatgccatttgcaacggccacaaggacctggcactggagttgatagcgactcagcctgccttgtccaaagatgtcaacaaatacggcgagtctcccatgtacattgcgttgatgatgagggattctaagtttacagatatttttgagaaactgttgggaattgatggttcttctcattcaggaacctatggctacaatgctctccatgcagctattagaaatggaaatccaggtgagaactatggagttcaattgagatcacatggcaaactagcctagtatcatgaaactttatgctttgagctttttaagatccttggggacatgctttgtattgtccttgaggagatgccatactttttagtatttatatatgatacctctcggtacctcaataataggtaagtgcaaggaggcaccataaactaacgctagaaagtgtggtatctcatattaccttctcaggacaataaaaactttgataatcctcaaattgatacatccttcatgccttggtttgtcctcagatattgctaaaagaatcatcgttgaacgcccaaatctggccacagaagaaaataaggatggtaatactccaattcagctagctgtacgttggggaaagatcgacatgctacgagtattgttgaaacatgacagatctcaagggtatgttatcaacagaaaaaatggttatcctctcctcctttctgctgcacatcgaggtcatgttgctgttgcccgagagattatcaaatattgcccagatgctccatattgcaaaaaagatgggtggacatgtcttcataaagctgtcaaatcaggtaatatggaattcgttgagtttatccttggggaaccacgacttcagaaactcgtgaacatgcgtagcagcaaggggaaaacagctctacattatgccatccagaagtgtgatccgaaaattgttgctgctttacttgacaagaaaatagacttgacaattcttggcagtgacggtaatgcagccgcttgggaattacgggatgccttggatagtgcgaagacattaaactgggtatgtatgtttgccataggtcgattttttttttccattgatgatgtggtcattttgtccattttgcaatcaccgctagtaacttgattttactatcaagaaattaacaaacattaattagggaacatctcaactcccgtgaaaagaataatctgattaattaaaacttaatatttcaaaacactttactatttacacaatgatcttgcctaatttggagtaaaaccaaacacatacttgcaataaaaacatctggaacaatttgaattttatatggtaactttgcaagatggtagcaaacagagaaattgtgaaatgatgccatgtcatccccatagtttcagaggattcttgtttctgtgccattgcaccttatcaaatctcaccagttataatagtacaggcacattctggtcccaataattgatggtacaacagcaagctttggtgatgcatcttttcagattataacttactattaaaagcattgatgttcacacacatttatgtggtagttcttatttatattcctcattatgttacagtagcacaaaattatctctgtaaacagggattgcacgaaattatttcacctgaaagtttcattttttgaatttaggaaaaaatatttaaacttggtaaaaaaattttgaatttcaacttttttggggacaaaatatttcttaatttcagatctattggctcctcacacccccaatccccagaggaaatcctttttggctttctgaagtgttcatgaacccttctggttaagtgtagtacttcatcatatatcatcaaggaccacatagaaaaacttattcatgtaatagattagctgatattttagacatactgtgaactctatttattcctctctctggattaatgcagaatgaagtgtcaatgcttatgattaaagctgatcctccaaatgcaaaatccgtttataatcttcacgaggaagccaaagaaaagttgatcaatgcgtcaaggaaggatgcaaggtcgctgactcaaacatacacaagcaacacttcgctagtggcgatcctcatcgcaacaattacctttgctgctgctttcaccctgcctggaggatacagcagtgatgctggaagccagggacttcctataatggcaaggaacgttgcctttaaggcattcttgatatcagataccttagcaatgtgcgcctcacttgctgttgcgttcatatgcatcatagcaagatgggaggatctcgatttcttgctttactacagatccttcaccaagaagcttatgtggttcgcgtacatggcaacaactacagcatttgcaaccggtttatacacagtattggcccctcggctgctatggttagctgttggaatttgctctgttgctgttttagtgccaattctcactaaggtgctcggggaatggcctgtcttaaagctcagaattcggttgggccaagctttcaaatcagagttccttgatatggtctgatattatcgatatatcttgtaaatgatagcatattatatcgttattgttcaaatatatgtgtcacgtgttgtttgatcaataatagcatacattgttaaatctttaacttcatgtatataatctaaataatgtactctgaacattattcatgtggagcttatgtaatgacttgtatcttttttttcaagttcttgtttattgttattgatttgttaactgc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0251400, RefSeq:Os11g0251400