Os11g0255300

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Revision as of 09:06, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0255300| Description = Cysteine endopeptidase (Cysteine proteinase (EC 3.4.22.-)-rice)| Version = NM_001074162.1 GI:115484972 GeneID:4350216...")
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Gene Name

Os11g0255300

Description

Cysteine endopeptidase (Cysteine proteinase (EC 3.4.22.-)-rice)

Version

NM_001074162.1 GI:115484972 GeneID:4350216

Length

2693 bp

Definition

Oryza sativa Japonica Group Os11g0255300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:8381272..8383964

Sequence Coding Region

8381546..8381812,8381971..8382111,8382366..8382601,8383226..8383718

Expression

GEO Profiles:Os11g0255300

Genome Context

<gbrowseImage1> name=NC_008404:8381272..8383964 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:8381272..8383964 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctgaggtgcttcctggtcgcggcggcggcggtggcgttggctgcggcggcggcagcgccggcgagggctatcccgttcacggagagcgacctctcgtcggaggagagcctgcgggcgctgtacgagcggtggcggagccggtacaccgtgtcgcggccggcagcatcaggaggcgttggcaacgacgacggcgaggctcgccggcggttcaacgtgttcgtggagaacgcgaggtacatccacgaggcgaacaggaggggcggccggccgttcaggctggcgctgaacaagttcgccgacatgacgacggacgagttccgccgcacctacgcgggctccagggcgcgccaccaccgcagcctgagcggcggccgcggcggcgaggggggctccttccggtacggcggagacgacgaggacaacctgccgcccgcggtcgactggcgcgagcgcggcgccgtcaccggcatcaaggatcaaggccaatgcgggagctgctgggcgttctcgacggtggcggcggtggagggagtgaacaagatcaagacggggaggttggtgacgctgtcggagcaggagctggtggactgcgacaccggtgataaccagggctgcgacggcgggctcatggattacgcgttccagttcatcaagaggaacggagggatcaccaccgagtccaactacccatatagagcggagcaggggaggtgtaacaaggcaaaggcaagctctcacgatgtaacgattgatggctacgaggacgttcctgccaatgacgagtcggctctacagaaagcagtcgcaaaccagcctgtggctgttgcagtagaggctagcggccaagatttccagttctattcggagggtgtcttcaccggagaatgcggcacggatctcgaccatggtgttgccgctgtcggttacggtataactcgagacggcaccaagtactggatcgtcaagaactcgtggggcgaggattggggcgagagagggtacatcagaatgcagcgtggtgtgtcgtcagactcgaatgggctgtgtggcatcgcgatggaggcttcttaccctgtcaaatcaggagcacgcaatgctgctgcaagtaacagagtggttaaagacgagatgtga</cdnaseq>

Protein Sequence

<aaseq>MLRCFLVAAAAVALAAAAAAPARAIPFTESDLSSEESLRALYER WRSRYTVSRPAASGGVGNDDGEARRRFNVFVENARYIHEANRRGGRPFRLALNKFADM TTDEFRRTYAGSRARHHRSLSGGRGGEGGSFRYGGDDEDNLPPAVDWRERGAVTGIKD QGQCGSCWAFSTVAAVEGVNKIKTGRLVTLSEQELVDCDTGDNQGCDGGLMDYAFQFI KRNGGITTESNYPYRAEQGRCNKAKASSHDVTIDGYEDVPANDESALQKAVANQPVAV AVEASGQDFQFYSEGVFTGECGTDLDHGVAAVGYGITRDGTKYWIVKNSWGEDWGERG YIRMQRGVSSDSNGLCGIAMEASYPVKSGARNAAASNRVVKDEM</aaseq>

Gene Sequence

<dnaseqindica>2153..2419#1854..1994#1364..1599#247..739#agctcattgaactgaataaagtcggtgtgctatagctaccattcccccggacctgtgtgttggcgctgtcggtatctgggtggtgatatattttttctttttttttttacgatctttctagagttgtaatcttgtaattttttttctgctctatcaatagaacttcgcatttccaaaaaagttcatttcagctcactcaactgaataaagtcagctagcttgtattttaggtgaaaaccgtgcgaaatgctgaggtgcttcctggtcgcggcggcggcggtggcgttggctgcggcggcggcagcgccggcgagggctatcccgttcacggagagcgacctctcgtcggaggagagcctgcgggcgctgtacgagcggtggcggagccggtacaccgtgtcgcggccggcagcatcaggaggcgttggcaacgacgacggcgaggctcgccggcggttcaacgtgttcgtggagaacgcgaggtacatccacgaggcgaacaggaggggcggccggccgttcaggctggcgctgaacaagttcgccgacatgacgacggacgagttccgccgcacctacgcgggctccagggcgcgccaccaccgcagcctgagcggcggccgcggcggcgaggggggctccttccggtacggcggagacgacgaggacaacctgccgcccgcggtcgactggcgcgagcgcggcgccgtcaccggcatcaaggatcaaggccaatgcggtaaaaaagcgtgaacatttttttctcgttctaaaaagcatataacatttctatggaaaaagccaaatgcagtcaaaaaaacatatggatagatatagtacaaattatgcaaaatcattagattattacggcacattattttctaacaggatttaaaatttcggtttccgaaattttggaatccctgttaacacgaaatttttggatttttttctaattattcttaaatttagtcaaaaactcaaaatatatttaaattcagttagatttttaaataatttcttgcataagtgaaaatacgatttttttttcaaaatggttttttactgttggctacacttttttctcagaatattttatctatccatataattaagcatatagtttatggcaaaagatcttatatttacttcgaaaataattaactatttgccactcttacgagtggcgataaaggatttgccactgaacccacatgtcatagacacatgagagccacatgtcatatataacaagtgacaaatccttaatggccacatctcaaaagtggcacaaagttaaatgtcccatttacttcgtgcacgtgtgtgctagtcactcggctcttattggtgtgattttaagggagctgctgggcgttctcgacggtggcggcggtggagggagtgaacaagatcaagacggggaggttggtgacgctgtcggagcaggagctggtggactgcgacaccggtgataaccagggctgcgacggcgggctcatggattacgcgttccagttcatcaagaggaacggagggatcaccaccgagtccaactacccatatagagcggagcaggggaggtgtaacaaggcaaaggtaattgcacggtgaaatctcatgaaaaattatatttatgttaactatactaaaaaaaatcaatgttgaatttgaagaaaaaaaataacttaatttttgcgcaaagcgttcggaggaaacataaatgtttatcatgaaaaaagatctgctccgagtaaagaaagatgcatggttaataaacacttgttttaggactaaaatgaagttagtctgaatacaaactgaaaatttgccatctggtgtttatgttgcaggcaagctctcacgatgtaacgattgatggctacgaggacgttcctgccaatgacgagtcggctctacagaaagcagtcgcaaaccagcctgtggctgttgcagtagaggctagcggccaagatttccagttctattcggaggtaattaacaacatgaccaacaacctagctacacgatatgtctgaaattaatcaacagttcaacacatgatctacacatattcagtgtgcgtgtgtctaattatactcaaagatactaataccatcatatatatatcacttgggaataatcaaactagggtgtcttcaccggagaatgcggcacggatctcgaccatggtgttgccgctgtcggttacggtataactcgagacggcaccaagtactggatcgtcaagaactcgtggggcgaggattggggcgagagagggtacatcagaatgcagcgtggtgtgtcgtcagactcgaatgggctgtgtggcatcgcgatggaggcttcttaccctgtcaaatcaggagcacgcaatgctgctgcaagtaacagagtggttaaagacgagatgtgagcctgtgatcgatggagggatatgatatggatatgatcgatgctttatgtgtgcttcgctgaaagtagtgctagctaagctttcgttgtcaactggatttaatcttctactgttcacggttgtactgtacgccaggtgtcaaatcagaagttaggtaaaataaattcaaagaggagcatgactaacataatgtgctcaactggattgctgaaaaatttgctcaaatcgacattactgggaaaatattttttgcagacaaggtgcacctatcttt</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0255300, RefSeq:Os11g0255300