Os11g0265600

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Revision as of 09:07, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0265600| Description = Diphthamide biosynthesis protein 2 family protein| Version = NM_001074193.2 GI:297611609 GeneID:4350247| Length = 68...")
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Gene Name

Os11g0265600

Description

Diphthamide biosynthesis protein 2 family protein

Version

NM_001074193.2 GI:297611609 GeneID:4350247

Length

6813 bp

Definition

Oryza sativa Japonica Group Os11g0265600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:9134116..9140928

Sequence Coding Region

9134116..9134202,9134320..9134507,9134951..9135059,9135712..9136096,9136504..9136573
,9136674..9136741,9138273..9138388,9138475..9138581,9138752..9138891
,9139058..9139273,9139619..9139741,9139773..9139874,9140663..9140928

Expression

GEO Profiles:Os11g0265600

Genome Context

<gbrowseImage1> name=NC_008404:9134116..9140928 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:9134116..9140928 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcgacgacatcgacgcgaggtacgaggtcccccgcacggcggagttcatccgcgcccgcgcctacaccagggtcgcgctccagttcccggacgagatgctcagggacgcggcggcggtggcgcaggcgctgcggcgggagctaggcggcggtggggtaaagctgttcgtgatggccgacacggcgtacaactcgtgctgcgtcgacgaggtgggcgcgtcccacatcgatgcccagtgcgtcgtccactacggccacgcctgcatgagcccaacatccaatttgcctgctttcttcgtgtttgggaaaacaccattggataccgatgcttgtggccgctcattgttggagtgctcgagagaaagtgataaacgcatcctggttttttatggattagagtatgcacatgcattggatgatcttaaagcagtagttgcggaattatacaaatcacattctcgcagtgttgaagttcagtatgcagatgttctctgttcagttatgagcccaagctctgctgcagaagtggaacacggtcaatccgatggaagcactcatagtgatgatttatctatacaaagtgatgtagcgacatttgtgaataattgttgcaacgtggaaggatccacacgcaagtatagccttggaggactaacatggtctacatccatagatgataatatggaggactatttgttatattggataggacaagataactcagcatttgccaacattgtgcttaccttcaataaatgtgatatagttaggtatgatacagtagcaaatcaaccatcaagggatgtctctcatctgatgaaaatacttaggcgcagatattaccttgtggagaaggcgaaggatgcaaatattgttggcattttggtggggaccctgggtgttgctggttatcttcacatcattgagcaaatgaaagatctgatcaaggctgctggaaagaaatcatatacgttagtcatgggccgacctaattccgcaaaacttgctaatttccctgagtgtgaagtttttgtttatgtttcttgtgcccaaactgctctattggatagcaaagattttttagctccagtcattacgcctttcgaagctgtattagcttttagcaggggaagggaatggacaggagagtatcttctagatttcaaggatttgatcactacagataaaccagaaatttcaagcacaactgaagaagcaagattttcctttatcaaaggtggctatgtggaagataattgccttgaagataacgaggaacagccagagacatcgcttgcacttgctgaggtaacagagaaggcgctaagtataaaaaatcagaataatgatgcagttctttaccaaggaggagcaaagtctgcgatcgactatctcaaggcacgatcctaccgtggtctcaccggagaatacgagggtccagcaccagactcggtcttgacaggcagaacagggagagctgccgtattccatatttgcaaatctgcaatttggttcctctgtaccaaggtggctgtaaatactggcagaaacagccagcaagatcacattgttttgcaaagccggctagatgctccatatgctgattcaaagctcatgactgctggaaaaaagaacatgatcacaccacttattggaaatgaaatggtaattaggatcaaccagcaggagcacacctgtcacaaagaaaggagagactcgccgttgaactcaagctccttcaatatctcggaaggttgcattatattgtcgatgccagagaaagacgagttcatcccggtgaaggtccacatgatcttttcgagcttagggacaagccccattgtggaactcgatctcagtgattttaaagcagtgcacaataagatcgcagagttttgggaactcatctttgttgaaggcaagatggctttcatcaaaagactcatccaagagctccaggcagcggatatttga</cdnaseq>

Protein Sequence

<aaseq>MGDDIDARYEVPRTAEFIRARAYTRVALQFPDEMLRDAAAVAQA LRRELGGGGVKLFVMADTAYNSCCVDEVGASHIDAQCVVHYGHACMSPTSNLPAFFVF GKTPLDTDACGRSLLECSRESDKRILVFYGLEYAHALDDLKAVVAELYKSHSRSVEVQ YADVLCSVMSPSSAAEVEHGQSDGSTHSDDLSIQSDVATFVNNCCNVEGSTRKYSLGG LTWSTSIDDNMEDYLLYWIGQDNSAFANIVLTFNKCDIVRYDTVANQPSRDVSHLMKI LRRRYYLVEKAKDANIVGILVGTLGVAGYLHIIEQMKDLIKAAGKKSYTLVMGRPNSA KLANFPECEVFVYVSCAQTALLDSKDFLAPVITPFEAVLAFSRGREWTGEYLLDFKDL ITTDKPEISSTTEEARFSFIKGGYVEDNCLEDNEEQPETSLALAEVTEKALSIKNQNN DAVLYQGGAKSAIDYLKARSYRGLTGEYEGPAPDSVLTGRTGRAAVFHICKSAIWFLC TKVAVNTGRNSQQDHIVLQSRLDAPYADSKLMTAGKKNMITPLIGNEMVIRINQQEHT CHKERRDSPLNSSSFNISEGCIILSMPEKDEFIPVKVHMIFSSLGTSPIVELDLSDFK AVHNKIAEFWELIFVEGKMAFIKRLIQELQAADI</aaseq>

Gene Sequence

<dnaseqindica>1..87#205..392#836..944#1597..1981#2389..2458#2559..2626#4158..4273#4360..4466#4637..4776#4943..5158#5504..5626#5658..5759#6548..6813#atgggcgacgacatcgacgcgaggtacgaggtcccccgcacggcggagttcatccgcgcccgcgcctacaccagggtcgcgctccaggtaatcccgctcccgcgccgcctcgatccggttcctctttcttcgcgatgatctttttggttgttcggggttcttggctcacttggagggggggttttcctcttcttggctgtaaagttcccggacgagatgctcagggacgcggcggcggtggcgcaggcgctgcggcgggagctaggcggcggtggggtaaagctgttcgtgatggccgacacggcgtacaactcgtgctgcgtcgacgaggtgggcgcgtcccacatcgatgcccagtgcgtcgtccactacggccacgcctgcatgagcccgtgagacctcctcccccccccccccccccccattacccttcctcgcctctagattggagctagctttcagttggatgcacatatgttgggtttgtggagattttagtctctgttttggggcttgtaaagaacactgatagaaatgtgaatccatatcacagattacttccgtaggggaatccgttatcccaaattattactttcggagtggtatttcgaattcttagttgatctggtgactaaagtagaggcattttcagctcaaaatttaggagggaactattggtgattaattgaaagttttttttttcatatgtttgtcagttctgcaatcccaccatttttttccactgcttgtttgaagctgttctctgttgctattaatgctccagtgcaccgcactaacactctgttcccactgatgataagaaatttgaatgcagaacatccaatttgcctgctttcttcgtgtttgggaaaacaccattggataccgatgcttgtggccgctcattgttggagtgctcgagagaaagtgataaacgcatcctggtatggtaaacctatttctaatgttctgaaaattatgcttcaattcatggaataagctataactctgatttgttattaccaaagtacagccaaattatggcattacgctttaatttttcctctacactataaaatcaaatcaaatgtaccaaaaaaaaaatctcctttgatttcaattatcgtgaaaaaaaaaagttaaaaatcatagggtagttcttcatacatcatcttcaattttcatggattcaaatatttagaagtgagtgcactatattggtagtcttaaaagcaacctcaattggatcatgaatgagaacttgtcgttttatcatttatgcagtggacacgaattcgatatagacctacagtagctcctgcttgtgtctcatgttgtctacctgtcagtatgttgtgtagacagtgatggttaattaattagctatatctactggatgttatcctatttccaagtaattggttagggttttatatttgtacttctcagtattgttttttttattgagcatttgactcatcgactgttactatttgcatatttgaccatgaaatagctaatgtaagatgtgtatggctagaaatttttatcttcattaatttacttttaatagtctatgatactcttgtcaaacaggttttttatggattagagtatgcacatgcattggatgatcttaaagcagtagttgcggaattatacaaatcacattctcgcagtgttgaagttcagtatgcagatgttctctgttcagttatgagcccaagctctgctgcagaagtggaacacggtcaatccgatggaagcactcatagtgatgatttatctatacaaagtgatgtagcgacatttgtgaataattgttgcaacgtggaaggatccacacgcaagtatagccttggaggactaacatggtctacatccatagatgataatatggaggactatttgttatattggataggacaagataactcagcatttgccaacattgtgcttaccttcaataaatgtgatataggttcgttatcttttcaatagccagtggggaaattatttgaatttgtgttagtcatgttttccttctattgtagtttgcctctagaatctattttggttttcgtaagataagtacgaaccattagttggacaatatgaagtactacatggcatacatcttgctttggaagttattgtattctcatttggctttaaatatctctatccttaacgtttagttatcatgtaacttccagtcaatgctttatattgtaaatgtagctattctaattcccttcttcatatgaatgatctgacaggaggtacaatccgtccagtgtcatgtcataacataattgctttaaagcagagacctttataatgaaatgcattctaatattaatgaacatttttaattttattatgcagttaggtatgatacagtagcaaatcaaccatcaagggatgtctctcatctgatgaaaatacttaggcgcaggtcatcttatgcagcatatataatactttatttttgcgtgaaatgaaagattttttttttgtcattgtagcattatttacaaaatagtttgtatatgcagatattaccttgtggagaaggcgaaggatgcaaatattgttggcattttggtggggaccctgggtgttggtatgtattcctttggcgtgttttattttttgatttgtttcccattgtaaagtacacataggaactgttgaccctattaaatctgtcaagttacgaattaacaaaccccattcaaaatttgccagcagttcagcactatgcaatgttgtattggagaaagaaagggggacactacaattgcagataacagtgcttgattaatatgtcactcagtcagaatagtcttttcctttactcaatccttgtgctgaggctaaattaacacccctaagaaaattaaatggagtatgttgctaatcacaagattattaatcgttatgctatgttaggttgttgagctagaaaatataggctgggcttgtctctaccttgtgaaattgaggtgttatttgaatggtgaaaaaaaaggttatttgtgggctctaaatttctactacatttgaagtttactttggtcaacctggtcgaagaccaaggttgattcaactggatttgaagtagttccacacatgacctatgtaggaaccatccaattacttcgatgttggttctacctgttttaagtaaattgtgctcacggtacaacaacttggtgagtgggtgcgatttagtgcaagaaataaaaaatatgtacaacaacttggtaatggggtgcacatttggtgcctaggaggtgccacacatgcaaactggctgtgtcagctggccagctcgtcaactaggtcacccattatgtgccttcaaccaagattcgaacagactagtagacaatcgctggcagcaaagcttccattgtcttcttcctactcttcataaagttgcacatccatctcatctcactgactgcatcaccccacctcacctttggtgatcaccttgccattgattcgagaagccagaatggcaaagaacttcaaccaaataataagatgttggtgattatgcagagaaacacattgttgaaggcctcagcgtgcccatcgtgcaccacatggcacctcctagaactataagatcaacaataagccaacttgttatagttgatcgtacaatttctaagttgtattcaatctcatctagccatcaagttgttgtactgtgaccgttatttactctgttttggtttgataccaaaaccaaccttaccaaattttggtaatgccaaattttggcactgccaatttttggtgacatagaagcgtgcggtagttgcttgggttgacaccttaacaaatgcaaggtgttaggtgtgatgttttagaattaccaaattttgatgtggtagaagtatttagagtctgtttggtttgtttccttattgtaatgactaaaaatggtgacagatcaaacatacccctattccttttattttcaactgaactgtctatttgttttgatttttatattataaatgctttcactgaacctcactgccactatagctttagcttgcacattattgtcttttaactttattacacactacatctaaatgatattatgtggtacatggcatcattttcatatgcagctggttatcttcacatcattgagcaaatgaaagatctgatcaaggctgctggaaagaaatcatatacgttagtcatgggccgacctaattccgcaaaacttgctaatttccctgaggtgctactgagttctaatatgttttctctgcttttcatgttaaggataactgactcaccattctttttttttttttggtatggcagtgtgaagtttttgtttatgtttcttgtgcccaaactgctctattggatagcaaagattttttagctccagtcattacgcctttcgaagctgtattagcttttagcaggtacacaccattattgcctccgatagtgctgttgacatacttgtgctgttcatttatcaatcatgactttatattaagttgtgtatggtggtctggcctcatgtggatgcaagttcgaagattttttcttacattcttattaagcagtatcacatttatcactttttcaggggaagggaatggacaggagagtatcttctagatttcaaggatttgatcactacagataaaccagaaatttcaagcacaactgaagaagcaagattttcctttatcaaaggtggctatgtggaagataattgccttgaaggtatagcatctactcttgggttttgaaatgatcatgtcaattaattatttgtcgacttccgagtacatataacatgacccgatattctgcattagtacccccgttctcatggctgatgcattcctttacctttttcttccctgttccgcaccatttggtcccacagataacgaggaacagccagagacatcgcttgcacttgctgaggtaacagagaaggcgctaagtataaaaaatcagaataatgatgcagttctttaccaaggaggagcaaagtctgcgatcgactatctcaaggcacgatcctaccgtggtctcaccggagaatacgagggtccagcaccagactcggtcttgacaggcagaacagggagagctgccggttacaacaacgagaaaaaggagattacacagtgaatgaatgacataccttgagtgggaaaatatatatatatatatatatatatatatatatatatatatatatatatatatttgacttgtttgccctcgatgggcgattgatggagaggcaattttgtacttcagaaagtactgtcagatgcctcagttttgttgtgagccatgaactatgtgttcctttttttttttcttttatgatggaagggaaactccccagcctctgctcctactagggaactgtgtttcatcaaactgttatatgttcagaacgatgttgtacatctcctgccaacatactgtacagtattccatatttgcaaatctgcaatttggttcctctgtaccaaggtggctgtaaatactggcagaaacagccagcaagatcacattgttttgcaaagccggctagatgctccatatgctgattgtaagtttgtaatcatgctatgataatttagcaaagctcatgactgctggaaaaaagaacatgatcacaccacttattggaaatgaaatggtaattaggatcaaccagcaggagcacacctgtcacaaagaaagtaaccgatcgagatataaattaaatccacaaaaatggaaaaaaaaatgttgtctggttgatgtgtcaaggacaacaaatctggttgccatcagctgaaatcagcactaggaaagcaaacaataggactgcactgtacttcttcccttcccttgtatcatggtgatgtaatcgactgatttttaaaagagcttccatgttcttaaaaatgaaaaaaaaaactcagcttcaaggacctagattggcatgaatgcatgaaacacaaaccacacacttcatcattgcagaacccaatcaaatattcaaagcatatgtagtgtacattgtagcacatagtacatttacaaatcaaatgtgcacacacaagcactgcacttattacatgagaccacatatcactcgatatacagataggaaagccacacaagtccaaatccatgagcatagacacaaccattatgctcaaccatagtgccaaaacacacacagaggcagaatatatacaaatgcacaccacacatatatagcagacagaaacacacaattaagtagtagcaaaccaaacctcatgagcacccaaatgcaaaccgataatgggagggacacgatggtgattcccttcagctcgacgtccggtgccgacgcttgtccttggggatgaataggcagcatggcgcaccgtgtagtttgcttccgcgttcccttgtgttttctcatgaatttcccatttgtagtatgtataatgaattttatctttatgcttatcaatggcttctttcacctggttagggagagactcgccgttgaactcaagctccttcaatatctcggaaggttgcattatattgtcgatgccagagaaagacgagttcatcccggtgaaggtccacatgatcttttcgagcttagggacaagccccattgtggaactcgatctcagtgattttaaagcagtgcacaataagatcgcagagttttgggaactcatctttgttgaaggcaagatggctttcatcaaaagactcatccaagagctccaggcagcggatatttga</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0265600, RefSeq:Os11g0265600