Os11g0275500

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Revision as of 09:07, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0275500| Description = Similar to Endo-1,3| Version = NM_001074216.1 GI:115485080 GeneID:4350272| Length = 3651 bp| Definition = Oryza sat...")
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Gene Name

Os11g0275500

Description

Similar to Endo-1,3

Version

NM_001074216.1 GI:115485080 GeneID:4350272

Length

3651 bp

Definition

Oryza sativa Japonica Group Os11g0275500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:9817794..9821444

Sequence Coding Region

9817794..9818055,9818180..9818201,9820010..9820133,9820224..9820314,9820477..9820566
,9820690..9820790,9821091..9821231

Expression

GEO Profiles:Os11g0275500

Genome Context

<gbrowseImage1> name=NC_008404:9817794..9821444 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:9817794..9821444 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaaactaaacccatcaccatggcaccgacgtcgatgctccaccggagcctcctctgcctcgccgtgctcgccgcggcggccggcggcggcgctgctggttctccgcggttgcagtgcctggagaacccgccggagctgacggccgccggcgacggcgaggccggcgtggtcgtccaaaacctgggaggattcgcggcctacgtcaccggcggcgccgcccactccggccgggccatcgtcctcgcctccgacgtctttggatttgaagcaccattgctgaggaaaatagctgacaaagttggtgaagcgggatattacgtcgtggtgccagatttcttccaaaggcgaccttacaatggagacccaagtataaacattacaaaatggatcatggctcactctccggtgaaggcagctgaagattctaaaccgatctttgctgctctaaaaagagaagggaaatatgttgttggagttggaggttattgttggggcggaaagttagctgtcgaggttgcgaaaaccaatgaggttggagcgattgtcatctcccatccttcatcggtgactgctgatgatatgaaagatgtcaaatgccccattgaaatccttggagctgagaatgacgctgtaacaccaccaagattagtgtaccagtttgttaatgccttgcgccaaagacctgaggttgattactttgccaggatctttccaggagtggctcatggctttgcttgcagatataacgccagcaacccgtttgctgtcagaactgctgaacaatctcttgccttaatgcttgactggtttgagaaacacttgaaatga</cdnaseq>

Protein Sequence

<aaseq>MQTKPITMAPTSMLHRSLLCLAVLAAAAGGGAAGSPRLQCLENP PELTAAGDGEAGVVVQNLGGFAAYVTGGAAHSGRAIVLASDVFGFEAPLLRKIADKVG EAGYYVVVPDFFQRRPYNGDPSINITKWIMAHSPVKAAEDSKPIFAALKREGKYVVGV GGYCWGGKLAVEVAKTNEVGAIVISHPSSVTADDMKDVKCPIEILGAENDAVTPPRLV YQFVNALRQRPEVDYFARIFPGVAHGFACRYNASNPFAVRTAEQSLALMLDWFEKHLK </aaseq>

Gene Sequence

<dnaseqindica>1..262#387..408#2217..2340#2431..2521#2684..2773#2897..2997#3298..3438#atgcaaactaaacccatcaccatggcaccgacgtcgatgctccaccggagcctcctctgcctcgccgtgctcgccgcggcggccggcggcggcgctgctggttctccgcggttgcagtgcctggagaacccgccggagctgacggccgccggcgacggcgaggccggcgtggtcgtccaaaacctgggaggattcgcggcctacgtcaccggcggcgccgcccactccggccgggccatcgtcctcgcctccgacgtctttggttagtagtgtgtgtgtgcatgtctgcctgatttgcttactgatcagtcactggctcactgccatcctttggtgattatcgattgattagccgttaattgttgctgttaatttggtttcttcaggatttgaagcaccattgctgaggtacaaaatcttcttttcatttcctttagcttcttgttcgttgtcatcttcgacagtaattttcttcatttcttcactctctggattataggcgcagattgtttattttattaacataacaaattaatattttgaaaaatgaactttgcaaatatctaataatgcagtagaataaataatattttttaaagcatggaccaaataatctgtagcaattatccgggggaaaatctaaagagaacagggcatgacaaatacttgacacttgaacaactctggaaagagactgatttaaaaaaaaagaaaaagacagatatggcttaattgtgtaccatacctgtttttcttgtcacaatgggttcaggtcagttttagtgaactatctcctatctttctgcagtgacttgtgagaaggataacaggtttagactttagacacgcaaaagtgtaaaagcaaataatcgtccattcgccctcaccatccatgagcttgaacaaagaatattcaacattgctatgtacatgtttcttccgtttcaaatactccctccgtttttaaatatttgacaccgttgattttttagcacatgcttgaccatttgtcttattcaaaaaaattttatgaaatatgtaaaactatatgtatacatgtaagtatatttaacaatgaatcaaatgataagacaataattaataattacttaaattttttaccgtttgtcttattcaaaaaacttttatgaaatatgtaaaactatatgtatatatgtaagtatatttaacaatgaatcaaatgataagacaataattaataattacttaaattttttgaataagacaaatgattaaacatatttaaaaaatttaacggcgtcgaataaacggagggagtagttagtatctttttttttttgagtaaccatcaattcatacggagaatcagaagcgtatactcatttttgctattttccatattctgaccttctaatgatataaatatgttaagcggttgaaatacatcatttactttcaatgtgcaatttcattattttaactactctacttagacaacatatatgctaaaactttcatcttctgtatccctacgaagttgaagataaatctactactccttccattacaaattatttgtagttctagttttatcctaagtcaacaatttctaactttaacaatcatttttttaaaaaaaatgtatattttgatgacataagttttaatatgttttttgattcacaataagaaatacttccaaatatgcaatccacatgtatttaaattatacaaattgctagttattaataggctaaaatagaaatatttgacttgggacaaagttataacaataattaatttgaaacaaaaggagtagtactatcattgtatactgtattactgtgcataactatgttcattacatgctttctaaaacatcatttctttaggggcaaacgctgtcgtaactcaatagtcaatagtaatatctcattgctgtccttgtaaagctgatttatgaatggataaccaagcaacgatccaatttcagaaattcagtttttctgtaaaaatatcgtggattccaatggtataacagcaaagatttcttcatgtggattgtactaaggtttctgtttttcattccaattttaagtgcttcctttagcttgaaagtattgtaaaacgtcccaactggattcctttcaatacaccttacatttttactcccattctagattgcaaagacaatttaaaatcaaatttgtggttaataatgctgacaattacaggaaaatagctgacaaagttggtgaagcgggatattacgtcgtggtgccagatttcttccaaaggcgaccttacaatggagacccaagtataaacattacaaaatggatcatggctcactctccggtaattgttttcaccaattacatagcttattcaacgacgattatcgaggagtcaattgatattgatcagtatattcaattgaaatttcaggtgaaggcagctgaagattctaaaccgatctttgctgctctaaaaagagaagggaaatatgttgttggagttggaggttattgttggggcggtaagcaaaatcgatcagcaaaaagaaaatgtctttacatatcctacatcagtacattagtaatacatacactctaaaaaactttgtaaattcctagttaatttccatatctagacttaattcatactattatagtctaaacaacaaaacttcaattgacaggaaagttagctgtcgaggttgcgaaaaccaatgaggttggagcgattgtcatctcccatccttcatcggtgactgctgatgatatgaaaggtgaacttatctgttttggtgctattgttgcgcagtatatagatgaatatatagttaactgattcatgtacgttgtatcctagtagtccctgtttttcttattccaaattgaccttgacacagatgtcaaatgccccattgaaatccttggagctgagaatgacgctgtaacaccaccaagattagtgtaccagtttgttaatgccttgcgccaaagacctgaggtaagttcctgttgattttcattggcacttgatgccaaatgcatcagcatagtcccacggtagacacacacgagaaaaatctcccactgatgatgagaaattgaaagatcatgctggctctatttttctttttgaggcaatattggatctagctaattagtaacattaatgaaaagtccaaacactagcacattgtcaataaacaagtttacaattgtttcttaaacacaaccactcaatgatctttaagaaaagaaacaagttatgaagagcctcttatggattgcatctttgttgcaggttgattactttgccaggatctttccaggagtggctcatggctttgcttgcagatataacgccagcaacccgtttgctgtcagaactgctgaacaatctcttgccttaatgcttgactggtttgagaaacacttgaaatgacaatagctaatcatgcatgtaatgcaaggccagtgcaattgtttatttccatcaaaatacattgctagtgtccatgtatatcctggtgttaagtgaaacttatataaataagcactagtgtaaagtgaaagtatgtgttgaatatggtgcgaagtgaaacaaagtgtactttatgaagtgcaaaatgcaaactctttttgttccgaagcgacc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0275500, RefSeq:Os11g0275500