Os11g0283500

From RiceWiki
Revision as of 09:07, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0283500| Description = TGF-beta receptor, type I/II extracellular region family protein| Version = NM_001074229.1 GI:115485106 GeneID:435028...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os11g0283500

Description

TGF-beta receptor, type I/II extracellular region family protein

Version

NM_001074229.1 GI:115485106 GeneID:4350285

Length

10433 bp

Definition

Oryza sativa Japonica Group Os11g0283500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:10178022..10188454

Sequence Coding Region

10178106..10178196,10178672..10178889,10185985..10186437,10186921..10187045,10187430..10188294

Expression

GEO Profiles:Os11g0283500

Genome Context

<gbrowseImage1> name=NC_008404:10178022..10188454 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:10178022..10188454 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcagctcatcagggctagtggactggagggggaggccggtggacaccaagaagcatggaggtgtcagagcatccatcttcatccatgcgatggtgctgttgaccaacgcgcccaacatcgccaacatgatgaacatggtgagctacctgcggggcaccatgcacatgggcgtggcgcaggcgtcgacgacggcgagcaactacttcgccgcgctgcagatgttctccatcccggccgccttcctcgccgactcctacctcaagcgcttctacaccgtcctcctcttcgcgcctatcgagatcataggctacatccttctagcagttcaagcgtacaccacctcgctgcacccgccgccgtgcagcccggcggccacggcggcgagcgccaccaccacctgcgagccggtgcgcggcgcgaacctgagcctgctgctgctggggctgtacctgatcccgatcggcgacggcgcggcgagggcgtgcctgccggcgctgggcggggaccagttcgacctgggcgacccggacgagcagcggcaggagacgagcttctacaactggtacaccttcgccgtctccaccggcggcttcgtcggcctcgtcttcatcgtgtgggtgcagaacagcaaggggtggggcgtcggcttcgccgtctccgccgccttcgtcgcgctcggcttgctcgtctgggccgccgccttcccgctctaccggaaccagctgccgatggggagccccatcacaagagtattgcaggtttttgtagcggcattcaagaaaagaaacgtccggttgccggagaatcccagcgaattgaagcaaattaaccaagatgacgatgccaatgcccacgaagttctccccaaaacagatggatttcggtgcttggagaaagcggcagtggaaactggcaatgacgctgggccatggtctctgtgcagcgtgacccaggtggaggagaccaagatcgtgctgcgcatggcgcccatcttcgtggccgctgttctcagctacatcccggtgccgctgctcctcagcctcaccgtgcagcagggcaacaccatggacaccaggctcggcgcagtccacatctcgccggcgacgctgttcctcatcccgaccgtcttccagatggtcatcctcatcatctacgaccgcgccatcgtgccgccgctgcgcaggctcacgggctacgtcggtggagtcacccacctccagcggatcggcatcgggttcgtcgctactatcgttgccaccgcaatcgccgcggtggtggagacgaggaggaagatgaccgccgaggagagcgggctagaggacgccaccactgggatcccgctgtccgtgttctggctgacgccgcagttcttcctcattggcattgtcgacgtcacctccttcgtcgggctcctcgagttcttctgcagcgaggcgtccatggggatgaagtccatcggcagctccatcttctactgtatcctcggtgtatcagcatggctcggcagccttctcatccaggtcacgaaccgtgtcacccagcgaaccaacggcggagggtggctggatggggccaatttgaacaagggcaagctcgaccggttctatgtcgtcctctgcatcatcgaggtggtggcgctggtgatctacgtgttcttcgcgaggaggtatgtatataggaatgaccagagggttgtggcccaagagcagaggaagggtgacacggggaatggtatggctgtgatctaa</cdnaseq>

Protein Sequence

<aaseq>MGSSSGLVDWRGRPVDTKKHGGVRASIFIHAMVLLTNAPNIANM MNMVSYLRGTMHMGVAQASTTASNYFAALQMFSIPAAFLADSYLKRFYTVLLFAPIEI IGYILLAVQAYTTSLHPPPCSPAATAASATTTCEPVRGANLSLLLLGLYLIPIGDGAA RACLPALGGDQFDLGDPDEQRQETSFYNWYTFAVSTGGFVGLVFIVWVQNSKGWGVGF AVSAAFVALGLLVWAAAFPLYRNQLPMGSPITRVLQVFVAAFKKRNVRLPENPSELKQ INQDDDANAHEVLPKTDGFRCLEKAAVETGNDAGPWSLCSVTQVEETKIVLRMAPIFV AAVLSYIPVPLLLSLTVQQGNTMDTRLGAVHISPATLFLIPTVFQMVILIIYDRAIVP PLRRLTGYVGGVTHLQRIGIGFVATIVATAIAAVVETRRKMTAEESGLEDATTGIPLS VFWLTPQFFLIGIVDVTSFVGLLEFFCSEASMGMKSIGSSIFYCILGVSAWLGSLLIQ VTNRVTQRTNGGGWLDGANLNKGKLDRFYVVLCIIEVVALVIYVFFARRYVYRNDQRV VAQEQRKGDTGNGMAVI</aaseq>

Gene Sequence

<dnaseqindica>85..175#651..868#7964..8416#8900..9024#9409..10273#tggctgcaacttcaacaaccagatcatcagatcacgtagcaagaatagtttcagaattcagagagagagagagagaggtgattgatgggcagctcatcagggctagtggactggagggggaggccggtggacaccaagaagcatggaggtgtcagagcatccatcttcatccatggtgagcttatgatggttgcatatgcttcttttttttcttgcttgatttcttctccttgtttggttgatatgtctctcctttgctcactgctgagagttgttggtttctgttcatggatagctagcttgtagaatggtagaaatgagacatattagtcaacaaagataagcttgttttttgcttgctgggtccatcaatcttggaatatctatgttctctatcgaagcaaccaaaaccttttcttgcttacaacagcaaattaaatacaaactcccccaagtttcaattctatccgtcatgcatcatctcgaattttaattacacggtgctgaaagaaaatttcagtgctcaaaattaaaacagtacaacgcatgcaagtatatactgtcaagaaagctcagtttttttttcaacttaattaactgacaacgagatatatgcattgcatgcgtacccctttcatgaatctgaatagcgatggtgctgttgaccaacgcgcccaacatcgccaacatgatgaacatggtgagctacctgcggggcaccatgcacatgggcgtggcgcaggcgtcgacgacggcgagcaactacttcgccgcgctgcagatgttctccatcccggccgccttcctcgccgactcctacctcaagcgcttctacaccgtcctcctcttcgcgcctatcgagatcatagtatgtccatttttaatttaagatgcggttttagtttgatcaccattaattttttattatgttaatataatacataattacaatagtataagcactttccagctccatcgtttcaattattcggcgaataagcaaaacaacatatttgcaaaagaaaaatattttttacgtaaaacttttatacgtgttcttagcgatctaaaagcaaaagctcaaaaataaacttagatgaaaatttaaggatgcaaattcaaattttggctgataagtataagcataagcgaaaagatgtggctgttgccataaattatataattcttgcaaaacagaatataatctaaatattagttttaaatatattaatggacaagttgtaaaaaataatataatattgttgtagttagacttttactagtatttcaagtagaaaaactaatagatgtgttggatgattgtgatactaatgaagaagcaagagatttttaaactccaataaaatatatccaatatggttgtcctctagcacaatttgacactactaggatgtgtttggataatgggaaatggggggtgggattgggattgggaaatgaatgaaaggttaggattaaatggaagagagggaatgaatggttaggatttaaagatgggtgggaaatcatttcccttccccatttgctaaacattgccctagtttttcatgcctaccgtcttgtccataaaagaattacactaccgaacaaattgatatcactttcagttcctaagtccaaaccggcattactatcgtcgccaacccggtaaatgatgcttagtatcagttctggttcacaatattttaagcagcaaattactgagagctaacaatggatattcaatttattgactgcgtgtgtagtactagttttacatgttcttttactttttgtgtgtgtcataatagtggctcgctgaaaagaaaagtgtggccttatgggaaatgggagttgtcggatctggagttgcttgtcaggcgtcaactttcagtttgattcgtatgtagtgcagacagcagggttgtcactttcatcctttacgaaaacaaaaaataccagccactaagttggaatatctcttcaaaaactatttggatcgatatgaccatgcatgatattgttgagattatagacatataatgatttaatctattccataaataaatcatgacattacagatgaaagtagcatgaacgcatcattagatctacacatgtaaactacacagtataacatgaacagatcaaatatgcgcaacatattgaacacgtaccgaggtgacgaaaagaccggctgcttggtcgaaacttttcgcaggtgtctacgaaggcacgaaacacgcgagcgaagaggaaggcgagccgtcgcgaacgaacagggagcagtcgcgcgaagcgcttcccaaaaaccttattgccgccttctcccggtgcagaacgtcaaaggcagaggttccgtagacttgctctcccgatcgctggtgcacgccggcgagcgggatggagtagtctacgagcgacggcgcagtacagagtaggaggcaaaccctagattgattttgcgtatatactgcgtgaagacggcgggtcggtttatatagagaagggtcgcttgatcagggcgcccgcacgatctctactgcgcgtaaccgaaccggataagtcgcgcgtaacttatccggactccacgccgtttgcacgcaccagatttttcggaacgtttccaaaacaaaaacgaatccgaatttgcagcaaaacaaaactgcaaaaggaggctgcatctgcgcaagggtgaggagccaatttttcggaccattcgagaccattcgacgcgtacgtcgtgcacgcgcgccgcctgccctgccctgccctgccaggccaggccaggcgagcgagcgcgcgcgtgtttcccctcttctctccaccacacatgcttcaagtggctaggaggacatcctcccttttaaggaggtccccctctcctagaataagcaaggtggtactaaactccacatgcatgccatcccatgaggtgggcttttgtgattttccaaagaattaatcttcgagtgggctaaggcccattcattaattccaacaatcccccaccaaatctcaaaatcccactgagatttgccttttccaatgtactgtttatataccagcggttcgatggagaccaattaaggttgaacatccacctagaactccaagctacacttactcacaacttgaacaatggactacgccttgaattgcaagtcttgtgcaagcaagtttcactcaaagtcttatctagtaatagaccgtctgtagactacccctcgggtggagcgtataagtcatactcctaggtctttagtaagcttcctagaagattcacccaaaatcttcatagactgcgaccaacagtcaagctcacaaaggtgagttctttcaagaatgctctgcaggacaacatcttcgctaattaaagccaacagaactcattgaggcatagccaacctgccttgcagctcacgagagtacatgcatcttcacttggagagggtatatatattgatactctcctctagtttactaatggtttgttcttcccaggatctaattcacgggatctccgatcacatagactgggttaccaccatagtataactcacatgggtctcaaacccatctccttcgatgcattgtttatcacatttcgtgatagtcccttcgtgaagggatctgccaggtttctcgctgtttggatgtaatccaacgttgtaactccggagtttcttaatttcctgacagacttcaatcgtcttttcacatgtctagacgatttcatattatccttagaactattcactttgacaattaccgtttgattgtcacagttcataaggatagccggcaccggtttttcaacaacaggcagatccattaatagatcacgcagccattctgcctcaacagtagcagtatccagtgccgttagctctgcttccatggttgacctcgtcaaaatggtctgtttgcaagacctccatgaaacagcaccaccacccagtgtgaaaacatatccactagtggctttgatctcatccacatcagagatccagttagaatcactataaccctccagtaccgcaggatacccagtatagtgaagccccaattccacagtacctttcagatagcgcattactcgctcaagcgcacgccagtgatcatctcccggattagaggtaaatcggctcaacttgctcacagcaaaggagatatcaggcctagttgcactagccaggtacatcaacgagccaatgatttgggagtattccagttgattcctagcaattctcttgttcttgcgaagcaacaagctaggatcataaggtgttggagaaggcttactatcaatgtagccaaagcgattcaagatcttctccacataatgggactgcaagagtgtaatcccattctcacctctaattagcttaatatttaagataacatcagctactcccaaatctttcatatcaaaattttgagacaagaatgatttaacctcatttatcacctcaaggtttgtcccaaatatcagtatgtcgtcaacatacaagcacaaaataactccctcacccccaccatggcgataatacacacatttatctgcctcattgactacaaagcctgcagatgtcaatgttttgtcaaatttctcatgccattgcttaggagcttgtttcagaccatacaaagacttcaacaatttgcacactttgccttcttgaccttcaactacaaacccatcaggttgatccatatagatctcctcatccagctctccattaagaaaagctgtcttaacgtccatttgatgaacgagaagaccatgtgaggctgctagagaaagtagcacacgaattgtggtcaatctagcaacaggtgagtaagtgtcaaagaaatcttcgccttctttctgagtatagcccttagcaacaagccgagccttgtacttttcaatagtaccgtcaggcctaagcttcttcttgaacacccacttgcaccccacaggtttacaaccatagggtcgctctgtcacctcccaagtcccgttagcgataatggaatccatttcactacggacagcctccttccagtagtctgcatcaggagatgcatatgcttctgaaattgacttaggagtgtcatccacgaggtacacagtgaaatcatcaccaaaagacttagccgtcctttgtctcttactccttcgaggagcttcactgacatcctcctcagagacaagttcatgtgtatgttcagtttgttctggtggtgtgattgaactgggaattatttcagagggttggttcgaaccactatgtgtatccttcattgggaaaaagctctcaaagaaggtagcatcacgagactccataattgtaccaacatgcatgtccggtacctcggatttaactattaaaaatctataggcaatgctatgatgagcatatcccagaaaaacacagtccacagtcttaggtccaagtttgcgcttcttcgttattggtacattgactttcgccaagcacccccatgtgcgcaaataagaaagtgatggttttctaccaatccatatctcatatggtgttttgtccttatttctgttaggaactctgtttaacacatgatttgaggtcaacaatgcctccccccaccatgccttaggcagtcccgcggtgtccaacatggcattcaccaagtcagtcagtgtgcggttcttcctttcagcaatcccattagactcgggagaatagggaggcgtcctctcatgtatgatgccatgttcctctcaggtttgccagaagcatttcatagctgtcagccacagagtgaccctgatctgccctgccaggcgaggcgagcgatctgccaggcgaggcgagcgagcgcgcgcgtgtgtttcccctcttctctccaccacacatgcttcaagtggctaggaggacatcctcccttttaaggaggtccccctctcctagaataagcaaggtggtactaaactccacatgcatgccatcccatgaggtgggcttttgtgattttccaaagaattaatcttcgagtgggctaaggcccattcattaattccaacagatataagcaagcaactaagcaacccaccacgttgatagcctagaacgacattgcagctctggaggtagcggaaaaatacatgtaaatgttggcagaaaatatgtgcaaaattgaagctgttcaacacaacaacagggcagtggatcggcccctgacaaaatgcaaaattccatggacagtgaacttactgttctgtcagtctgcaaagcataaacttatcttttcctttaatttccttgatgcataatcgatttttaaataaaattttccatggtgacatatagcaccatgatgtaaatttcaactcattttcaaatctaaatgctatagggtatcgcctgacgttctctcacttatgtgctctatttcaatccgatagtaacaggttttaccccaaatttcaaaattgaataattaattagactgcaggcattcgatttatctaaagagagtaacaaagaagctaggtgtccccaacaacagaccacccactgtggttttatgcatggtaggagaaggaaacacatcaccatatatgtatatggggcatagataatgatgataggcattaggcaacgaaagatgcagtcatgcagcctatcatgggagacagattttttttttttttggggggggggatgggagacagagttgagcattattgggacgaaacgatttttttttttgtgatatggtgcagatgaagttggtagggtgtgagtaatagtgaaatacttgaggaatagcgctctcaaaataaaaagacctaagggttttaataaacacatgttatcatgatctcacatgattattggagcattatcatccaagaaacgacatataatatattttatattatttactaactcgccattagtcactttttcttactacatagcacctactcgatcttttcttcgacaacctttctagaagctgtcaactttggaactgctctctcaactacaataggtatgattataccgatgtgattggcaatcagactgccgagtgctgattaatggccagatttttaattaggaaaaggatgtccacaaccaaataattgattgataagcgacatcaagttaagtagaaaagagaaatgaatttcaacctattaaggagtaactttcgacgactaaaaaaatctaagagtatgtttggataatgggaaagagaaatgaatttcaacctattaaggagtaactttaaatactagatatccattttctctcacattttcttatcctaatactttattcatttccacgtcccaatttcacctatgatttcttattatctaaaccaaaccataagagctttttcagctaattcttaggagggaattgaggaattattctcaaaattctcttgaatcccctgggaaataaattaacagggcaaaattggttatatagaattgaaagtaaggcctaatactgcaggtccgtaatcagtattgatgcggttttctaatagaaactgcactagctggcagtgctaaaattggttgatgacaggattacccaatttcggaaaccaaattcaaattgaaaattaaattttagaccagcagaaaacctagtatttgaaatttaaattataagtattaattctgccttccaaccggtaaatatcttcacagggtaaatttatcatttcttactaaagtatcaggagataccatagttttaagtgtaaaacttgaaatcttcacatactatatctctaaaggtatcaaaattcgtaatgtgaaattttagtatttgacttcttaagaattgtaaaatttctcaaaattaaaacaaaggacaaatttgtttagcacaagatcatgaataagaaaataaccatccaaacaagcttatcagttctgacaaatggatgcatggttactccatggcagggctacatccttctagcagttcaagcgtacaccacctcgctgcacccgccgccgtgcagcccggcggccacggcggcgagcgccaccaccacctgcgagccggtgcgcggcgcgaacctgagcctgctgctgctggggctgtacctgatcccgatcggcgacggcgcggcgagggcgtgcctgccggcgctgggcggggaccagttcgacctgggcgacccggacgagcagcggcaggagacgagcttctacaactggtacaccttcgccgtctccaccggcggcttcgtcggcctcgtcttcatcgtgtgggtgcagaacagcaaggggtggggcgtcggcttcgccgtctccgccgccttcgtcgcgctcggcttgctcgtctgggccgccgccttcccgctctaccggaaccagctgccgatggggagccccatcacaagagtattgcaggtgtgtatatgaaatcgaattatcgatggttgtgtttgatataacctcttttgagatttctgaatgttgcagtaattaaatgttttgtgtaatttgtattgaaggttgtgtgaagttatatttgtggatgtttagatgatacgagactgacaaacagggtccttgattaaggctacaaaattttgctaaaattgtataggcagagctaaatttcgtctaagattgcactgcaaattccccaatgttaatacaaacatgttgaagtcttctgtgtattccccccaaaaaatagattgcagtgtaaattgaagctatatttttgtaagtttagtttgtttcaaacaaaatatatgtgtaagttaagaagaacccataaataaaatagtttaaagcggatgacgaatagcaaaactgttcttttggtttaattctttttcgattggagctgtgtccatgacactataataaagctatgtatctcaggtttttgtagcggcattcaagaaaagaaacgtccggttgccggagaatcccagcgaattgaagcaaattaaccaagatgacgatgccaatgcccacgaagttctccccaaaacagatggatttcggtatgttgtccaaactctgaacattggcaagatttagactttgtctgtcggtaatgttggtgcagaggtgtataattatgatggtgcatcttctctcaccagattaagatttcgggttcaaatggtaaatgtatcttctatatcgacataatggcacaaagccagatgtctcaggatgaaaacatgatagacattcaattaaataaaatatggcaacccacttctataatattccatttacaaggcatgaaacagactttttgtgtcgatagcgttggattataagtaaattgcattctttctctcaacagttgaagtttataggttaaataagtttgtccattcaacttaataagtagcatcaagattttcattggcttgcaggtgcttggagaaagcggcagtggaaactggcaatgacgctgggccatggtctctgtgcagcgtgacccaggtggaggagaccaagatcgtgctgcgcatggcgcccatcttcgtggccgctgttctcagctacatcccggtgccgctgctcctcagcctcaccgtgcagcagggcaacaccatggacaccaggctcggcgcagtccacatctcgccggcgacgctgttcctcatcccgaccgtcttccagatggtcatcctcatcatctacgaccgcgccatcgtgccgccgctgcgcaggctcacgggctacgtcggtggagtcacccacctccagcggatcggcatcgggttcgtcgctactatcgttgccaccgcaatcgccgcggtggtggagacgaggaggaagatgaccgccgaggagagcgggctagaggacgccaccactgggatcccgctgtccgtgttctggctgacgccgcagttcttcctcattggcattgtcgacgtcacctccttcgtcgggctcctcgagttcttctgcagcgaggcgtccatggggatgaagtccatcggcagctccatcttctactgtatcctcggtgtatcagcatggctcggcagccttctcatccaggtcacgaaccgtgtcacccagcgaaccaacggcggagggtggctggatggggccaatttgaacaagggcaagctcgaccggttctatgtcgtcctctgcatcatcgaggtggtggcgctggtgatctacgtgttcttcgcgaggaggtatgtatataggaatgaccagagggttgtggcccaagagcagaggaagggtgacacggggaatggtatggctgtgatctaaacttgaaatgaaatgagtcgtgtttatatttacatggatgtaacgatatatatggtagtaatagtaaataatttggtggtacgaggagaaatggaggaacttcattgtgaaatttaataagacactatccaggagaaagaaaatcaatgtagatttccag</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0283500, RefSeq:Os11g0283500