Os11g0295900

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Revision as of 09:07, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0295900| Description = Similar to AP2/EREBP transcription factor BABY BOOM1| Version = NM_001074253.2 GI:297611665 GeneID:4350315| Length =...")
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Gene Name

Os11g0295900

Description

Similar to AP2/EREBP transcription factor BABY BOOM1

Version

NM_001074253.2 GI:297611665 GeneID:4350315

Length

5280 bp

Definition

Oryza sativa Japonica Group Os11g0295900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:10907874..10913153

Sequence Coding Region

10912020..10912811

Expression

GEO Profiles:Os11g0295900

Genome Context

<gbrowseImage1> name=NC_008404:10907874..10913153 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:10907874..10913153 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ttaacaaaccttgcaggcacccaagaggaagctgcagaggcatatgatatcgctgcaatcaaattccgtggtctcaatgctgtgacaaactttgacatgagccggtacgatgtcaagagcatcattgaaagcagcaatctcccaattggtactggaaccacccggcgattgaaggactcctctgatcacactgataatgtcatggacatcaatgtcaataccgaacccaataatgtggtatcatcccacttcaccaatggggttggcaactatggttcgcagcattatggttacaatggatggtcgccaattagcatgcagccgatcccctcgcagtacgccaacggccagcccagggcatggttgaaacaagagcaggacagctctgtggttacagcggcgcagaacctgcacaatctacatcattttagttccttgggctacacccacaacttcttccagcaatctgatgttccagacgtcacaggtttcgttgatgcgccttcgaggtccagtgactcatactccttcaggtacaatggaacaaatggctttcatggtctcccgggtggaatcagctatgctatgccggttgcgacagcggtggaccaaggtcagggcatccatggctatggagaagatggtgtggcaggcattgacaccacacatgacctgtatggcagccgtaatgtgtactacctttccgagggttcgcttcttgccgatgtcgaaaaagaaggcgactatggccaatctgtggggggcaacagctgggttttgccgacaccgtag</cdnaseq>

Protein Sequence

<aaseq>LTNLAGTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSIIES SNLPIGTGTTRRLKDSSDHTDNVMDINVNTEPNNVVSSHFTNGVGNYGSQHYGYNGWS PISMQPIPSQYANGQPRAWLKQEQDSSVVTAAQNLHNLHHFSSLGYTHNFFQQSDVPD VTGFVDAPSRSSDSYSFRYNGTNGFHGLPGGISYAMPVATAVDQGQGIHGYGEDGVAG IDTTHDLYGSRNVYYLSEGSLLADVEKEGDYGQSVGGNSWVLPTP</aaseq>

Gene Sequence

<dnaseqindica>4147..4938#ctctctctctctctcactgtccacatctctccaacaagagaaatactttacacacttgcagcaactcttccccagatggcctccatcaccaactggctcggcttctcctcctcctccttctccggcgccggcgccgaccccgtcctgccccacccgccgctgcaaggcaagaccagccatctcatgcaccgtggctcaaatcttttcccttttcatcatctttttttctctgtattttgattgatgggaaaattgattgtgttgatgtgcagagtgggggagcgcttatgagggcggcggcacggtggcggccgccggcggggaggagacggcggcgccgaagctggaggacttcctcggcatgcaggtgcagcaggagacggccgccgcggcggcggggcacggccgtggaggcagctcgtcggtcgttgggctgtccatgatcaagaactggctacgcagccagccgccgcccgcggtggttgggggagaagacgctatgatggcgctcgcggtgtcgacgtcggcgtcgccgccggtggacgcgacggtgccggcctgcatttcgccggatgggatggggtcgaaggcggccgacggcggcggcgcggccgaggcggcggcggcggcggcggcgcagaggatgaaggcggccatggacacgttcgggcagcggacgtccatctaccggggtgtcaccaagtaggtcgtctctcaccatgcatcttggtcttgctgttttgtgcagaaaattaattgattagattaatcgttttgagctttgtagggattgcattcttgcttgtagtgtttctggtgtgatttcttggattgcatgcactttagttaatttggattgtgatcttgggttgttcctcttgtcgattgattcatcggattgctcattcgattggtttttcgatgcattactgtactattatattttttttcgttgtgttttttgcattgtgatataatagtatttgagttttaatgcacacataaggtgtatattacatgttcttcatttctttctagtacgcatcgatttagccctgacattttatcatgaattttgccgaacgtatgtataggtatatcatataggagtatgatcgtactggggttttttatttgatttgtcattagtattttttttgccctattatttcactgttcatcaccaactctatcagtattattggagtgacaactgacaagattttttgtttctccttttttgtcttttgtatctttcccctttgtttacaactggcaagtaattgccgcagatatgctctagctgcttattatatttgaagaatattagaaaatctgagttctatagctctagctttttcttatttctacagtacgtgtatgctagtaattcatatatataagactttcggccttatacaaaagttcagttgcttgcttggatacttatctattctgaattttatctcagtaatatttgccttttcctgaaacagatagtacgaggcttgtttagtttccccaatattcctaactttccatcacattatatcacattaaaaaattttccacacacataaatttttaactttttttttcaaactttcaactttcttcaaacttttaacttttatcaagaacttctttatgctttcatactctgctactactctctccggttccatattaattaatattttaaacaaggttgaagtcaaacttttataactttgactatcaataactttaaaaatatttagtttaaagtaactagaacaacatatatagatttgtcttttaaaatactataataaaaataaacatgtatttatttatttattatatatattataatagaaaagtaaaattaaagatgtatcttgtagacggtgttattgtccaaaacgtaaaattaaaaagaatcggagggagagcatatacgagttctccagttggtgatattcatttatcgcgatcaacgatttaactaatacacggggcctttttttgtttaattgcgggagttgtgcaccttcatttgatttgactgaaccattaatgtctttcttgtaaattgtgttttagcctcatcattgtatgcatgtcatatttatcggctcaagaagacaagaaccgctgctgttctcgtgtttgactggattaattaactgactagtatacgttacccactccaactagtactgtagtacactacactccctttctctcaaagaaacaaaaaaaacaagtgcacttccataatttaaaattttagttaaaggagtgcatatattttaagacgaaagaagtattgtttgtagtaatatttgcaaaccattatacttcaatagattaccagtagttgcttgtcagttgctactactagtggtgctatagctttcatgtttccaattttctggttaatcaatttagttctatgatgaatcaaactggccaggacatcgcattaaatatcacatattactcgttattgctagttgtagttatatacggcccttatgttaaatcaataaaaccttttaaacctaactttgtatcttttcttcctattcattaggcacaggtggacaggaaggtatgaagcccatctttgggataacagctgcagaagagaaggtcagactcgcaaaggcagacaaggtaaacatccccatatatatgcttatttttctacgaacaatttgcttctaatttgctgcttaattaactaattacattgttttctgttgttgcattggttaacttgggactattttgttttggattccacagtatatcttggtaagtatatatttaagtttgtttacgcaaatatattcgtcatgttttcatttgcgcgtagtatgtgtaaattaaatgagtggcatatatgcaatcaatgcaggaggatatgataaggaagaaaaagctgctagggcttatgatttggctgcccttaaatactggggcactacaacgacgacgaattttccggtacaaataattatttctttcttaaaatgcaatgcatgtcaacctttaatcatatatataaatatacatgtttattagtatatgatatattgtcattgctgttaattaggtaagcaactacgaaaaagagttggatgaaatgaagcacatgaataggcaggaatttgttgcatcccttagaaggtacgtgcagttacaaatttatacagagtagcataatggtttctacattggttaagcttcacataagataatttaatgcagaaaaagcagtggattttcacgtggtgcttccatatatcgtggtgttacaaggtacatagttttttattggagtcgttttcttttatcttgtgcgatgtctaatttttcctgttgttatatttgtcttaagaaaactttagtttaacaatttattaatttaatataatttgtgttgatctgttaattttctaactgtgctcattgaaacttttttaaactgttgcaccaaatcttacatttgcaagtgttgacatcgaacttttaagaatcccgtgtcaatgaacttcaaagccattttctatattatattacatgccgttgctttgctaatagtgaatcaaatatgtgaaacagacaccatcagcatggaaggtggcaagcaaggataggacgggtggcaggaaacaaggatctgtatttgggcacatttggtaagtcacaaacctaatattttaagcatcaaccaaatccatcatctctaatgtcctaaaaaaaggaagcaagaatgaaaagcacaaagcaagctgctggaacatcttttcttttgttttcttcacatactccctccatactcgtaggtcgtttaggacaatgtttaagtcaaacattgggaatataaattatgaataactctcaagttgttgagtttaaaaatgtaaaaattatatgaatagatttgtcttgaaaaatactttcataaaagtatacatatatcacttttcaataaatatttttatataaacaagaagtcaaagttgtgttttggagaccgtgtcgctgttcaaaacgacttcctttacgagtatggatggagtatgtctcacatcactgatcactcagacccttaattatgattaaaaatcatttcaaagctgatactgagattaattaacaaaccttgcaggcacccaagaggaagctgcagaggcatatgatatcgctgcaatcaaattccgtggtctcaatgctgtgacaaactttgacatgagccggtacgatgtcaagagcatcattgaaagcagcaatctcccaattggtactggaaccacccggcgattgaaggactcctctgatcacactgataatgtcatggacatcaatgtcaataccgaacccaataatgtggtatcatcccacttcaccaatggggttggcaactatggttcgcagcattatggttacaatggatggtcgccaattagcatgcagccgatcccctcgcagtacgccaacggccagcccagggcatggttgaaacaagagcaggacagctctgtggttacagcggcgcagaacctgcacaatctacatcattttagttccttgggctacacccacaacttcttccagcaatctgatgttccagacgtcacaggtttcgttgatgcgccttcgaggtccagtgactcatactccttcaggtacaatggaacaaatggctttcatggtctcccgggtggaatcagctatgctatgccggttgcgacagcggtggaccaaggtcagggcatccatggctatggagaagatggtgtggcaggcattgacaccacacatgacctgtatggcagccgtaatgtgtactacctttccgagggttcgcttcttgccgatgtcgaaaaagaaggcgactatggccaatctgtggggggcaacagctgggttttgccgacaccgtagtcagagatggtggagaaggctgacaatgtgacggtttgccatgggatgcctctgttctcagtctggaatgatgcttagctgggtggagaattagctatagtagttactgaaaaggtgatattaacagttgttgggcagattgattaactgggggatatatagtagtcatacaaagtcttgcatgcttgctgattttgtattgctttcttatcaccaccatgcatgcaatctatagttttgcctttagctagaaatattagctctaaatatctcatggagatatgaattttatgctgatgttacttagggctcttgattatatatatgagctgataattcagc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0295900, RefSeq:Os11g0295900