Os11g0296800

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Revision as of 09:07, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0296800| Description = Chromatin SPT2 family protein| Version = NM_001074255.2 GI:297611668 GeneID:4350317| Length = 4721 bp| Definition =...")
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Gene Name

Os11g0296800

Description

Chromatin SPT2 family protein

Version

NM_001074255.2 GI:297611668 GeneID:4350317

Length

4721 bp

Definition

Oryza sativa Japonica Group Os11g0296800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:10955669..10960389

Sequence Coding Region

10955669..10955970,10956284..10956347,10956557..10956801,10957381..10957501,10957575..10957649
,10957740..10957866,10957948..10958693,10958819..10958949,10959301..10959390
,10959754..10959859

Expression

GEO Profiles:Os11g0296800

Genome Context

<gbrowseImage1> name=NC_008404:10955669..10960389 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:10955669..10960389 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ggtctcctcttcctagtactagctgcgcccccccccccccccaaccccctcgggcgcccgcttcgctccggcgactccacccggccgcgccgccgggatccgcccccccgcaggccgcccctcgtcgtcgtcctcgctggttccccgccggccccggcgccttttccttctgatccagccagccgcgtcgcgcgcggcgccggggggcatcgaattcgaatccgcgccctcgccgtcgtcgtcgccgccgccgccgccggacaatccggcgcctgccccctccgtgctccccccggccagagggattgcgggactgatacggccgggatcttgctggaaatggggggttacgagtacgcgaccaatggttatcatcggggaatggaggatgactatgaagacgagtactacagtgaagatccatatgatgaggaaggggagggtgctggtcaagagtatgccgaggaggatgacgagccgccggagggacagcaagagttccttcaaattagagaacgattaaaggagcagattaggcgaaaggcgcaggctgctagtgctagcgctgctggccgctcatcttcctcacatgatagaaaacctcaatccacttttggatccttctttgggccatccaagccggtgatttcccagcgggtaattgaagaaagaaaatcactgaaagaactacagaacacagcgtcaatgtccagggatcgaaggccttctgcaaaggagataccatcatcatctaaagtgcaatctaaaacaaatggacatcaccacaaacagaagattgtaaatgaggcaaaaagaaaggctgaggcacttaaggataatcgagactattcatttctactgtcagatgatgctgacatttcaccttctccaatggagaaacctgtggctaggtcctccttgagtcagaagtctgatcgcgagtcgacacattcagctgtgaagagcagagcaccgacaggccaaactgctagattgtctaatggatatggattgaagaacacattgtccagtcagaggcatactgaaggtagggtagattccaacagaaaggtggctggtgcaaacagagaaagggttgtcttgcctgacaatggaagaatgcatagtgtggttagaaatggatccacccaggctactacaagcaaagctgcaagtcaaaagcttcctagcaaggctcctattgccaacaggcctcctataaagagtgtaagtgatcaatctcttagggcaaatcattcagcttcaaagcaacttttgtcacagaatgggagaccacaatcctcacagagtcagaggatgcagtcgacctcgcatggtcagaggccacatcaacctgtgcaaagtcagtggccgctgcagtcattgcagggccgaaggccacagcagtcaccacaaaatacaaggccacaactgatgtcgaagagtcagagaccgcagcaatcattacagagacagagaccacagctatcctcacaaaatgagagattggaatcctcggagaggcaaaggccaccttcacaaagctacaggccacagtcgtcgcaagggcagaggcctagttcagtacaaggccgccagtactccgagcaaagaagaatccaggcaaatgatagagtaaagtcggcagaaaggcagataaggcctccctcgaaacccatgccatcacgacaaataccttccaacggaatgcgtgatgcccatgcaaagaaaaagcaaccgatgaaacgaagatttaatgatcttagcgaagatgaggaagatccgttggcaatgatcaggagcatgtttaggtatgatcctagtaaatatgcaggcagagatgacgatgatagcgacatggaagcagattttgctactatagaaatggaagagcaaagaagcgcgagaattgcaaaggaggaggatgacgagcaacttcgcctgattgaggaggaagaaagacgtgagcaggagaggaagaggcgaaagatggcgcgtggccgatag</cdnaseq>

Protein Sequence

<aaseq>GLLFLVLAAPPPPPNPLGRPLRSGDSTRPRRRDPPPRRPPLVVV LAGSPPAPAPFPSDPASRVARGAGGHRIRIRALAVVVAAAAAGQSGACPLRAPPGQRD CGTDTAGILLEMGGYEYATNGYHRGMEDDYEDEYYSEDPYDEEGEGAGQEYAEEDDEP PEGQQEFLQIRERLKEQIRRKAQAASASAAGRSSSSHDRKPQSTFGSFFGPSKPVISQ RVIEERKSLKELQNTASMSRDRRPSAKEIPSSSKVQSKTNGHHHKQKIVNEAKRKAEA LKDNRDYSFLLSDDADISPSPMEKPVARSSLSQKSDRESTHSAVKSRAPTGQTARLSN GYGLKNTLSSQRHTEGRVDSNRKVAGANRERVVLPDNGRMHSVVRNGSTQATTSKAAS QKLPSKAPIANRPPIKSVSDQSLRANHSASKQLLSQNGRPQSSQSQRMQSTSHGQRPH QPVQSQWPLQSLQGRRPQQSPQNTRPQLMSKSQRPQQSLQRQRPQLSSQNERLESSER QRPPSQSYRPQSSQGQRPSSVQGRQYSEQRRIQANDRVKSAERQIRPPSKPMPSRQIP SNGMRDAHAKKKQPMKRRFNDLSEDEEDPLAMIRSMFRYDPSKYAGRDDDDSDMEADF ATIEMEEQRSARIAKEEDDEQLRLIEEEERREQERKRRKMARGR</aaseq>

Gene Sequence

<dnaseqindica>1..302#616..679#889..1133#1713..1833#1907..1981#2072..2198#2280..3025#3151..3281#3633..3722#4086..4191#ggtctcctcttcctagtactagctgcgcccccccccccccccaaccccctcgggcgcccgcttcgctccggcgactccacccggccgcgccgccgggatccgcccccccgcaggccgcccctcgtcgtcgtcctcgctggttccccgccggccccggcgccttttccttctgatccagccagccgcgtcgcgcgcggcgccggggggcatcgaattcgaatccgcgccctcgccgtcgtcgtcgccgccgccgccgccggacaatccggcgcctgccccctccgtgctccccccggccagaggtgagacccccccctctcctaatccgggttgtggcggctccgcgggttgctttcgcctcacgcgggtgtcccagattcgcgtcgctgtacctgtcgaaaccctagatgggttggtggggggagcctgctgctttgcattcggagcggggatttccagtggaggggtctgttgcagcgggaattttggtcgattgttgcgttgttcggtgtatatttggttccgatcggggtgcttaattggttcgaggttgaacgcgccgtggagaattctcgacgagttcttgaactgaccaagttgttggctttgattcagggattgcgggactgatacggccgggatcttgctggaaatggggggttacgagtacgcgaccaatgtaagatctgttcttttgcacgatatatcctgttcagttccattttggatgcgattcttataaacagtaggaatcaaactttgctgaatactacgtttataatcatgagtatagtacctaaatcctttgaaagaacaataggaacttgagtcatttcaatgtgaaagcgcttctatttcccatgctgatgacgatcgatcatcttgaagggttatcatcggggaatggaggatgactatgaagacgagtactacagtgaagatccatatgatgaggaaggggagggtgctggtcaagagtatgccgaggaggatgacgagccgccggagggacagcaagagttccttcaaattagagaacgattaaaggagcagattaggcgaaaggcgcaggctgctagtgctagcgctgctggccgctcatcttcctcacatgatagaaaacctcaatccacgtaagtgttaagtatgtctcttctacattttgattgttatgcaattttgtctctaggatcaataaacctctgttaaactttctcaagcatcatatttgattttctccaggaacttgaataatgctgaaatttttagttgattgaaaaaaggtagtcaatgtatggctcctttatctacgtcccatcacaatctttagcatgttaagtttagttcatcaaaacttgctgagtatttttcatttgttggttacattgtttattactattgctttggagcctgagagttatcagttaatacattccccggtacatcctttttgaaatgttgtatttgaaattggattgtttcatcatagttgttttttaatgcgaacgtgtcgaatcaattttcgtttggattcctgcaggaaacaaaccgtagatgcatttgggtgggggtgttatttttaaatactacaccacacttgtatacattatgctattgctctactctgcatactttgtattttctgatatgtgaggtcaaatatcttttatgttttctccaagacctttgttatagttatgttatttgtgtagttttggatccttctttgggccatccaagccggtgatttcccagcgggtaattgaagaaagaaaatcactgaaagaactacagaacacagcgtcaatgtccagggatcgaaggccttctgcagtatgtagccctacatctgaccctaattatctttgattcaacttttgtaataattgtgtttaactatgtgtagaaggagataccatcatcatctaaagtgcaatctaaaacaaatggacatcaccacaaacagaagattgtaaatgaggtacaatgaacttctctttcattggatcatttttatgtttgctatgttaaaacttgagttgtgtcataaaatagcagctggaatttgcaggcaaaaagaaaggctgaggcacttaaggataatcgagactattcatttctactgtcagatgatgctgacatttcaccttctccaatggagaaacctgtggctaggtcctccttgagtcagaagtctggtgagtgaattgcgatttcactgaacttgttctttaatttttagtgaagtaatgctaatagttggttcgttgacatcgaagatcgcgagtcgacacattcagctgtgaagagcagagcaccgacaggccaaactgctagattgtctaatggatatggattgaagaacacattgtccagtcagaggcatactgaaggtagggtagattccaacagaaaggtggctggtgcaaacagagaaagggttgtcttgcctgacaatggaagaatgcatagtgtggttagaaatggatccacccaggctactacaagcaaagctgcaagtcaaaagcttcctagcaaggctcctattgccaacaggcctcctataaagagtgtaagtgatcaatctcttagggcaaatcattcagcttcaaagcaacttttgtcacagaatgggagaccacaatcctcacagagtcagaggatgcagtcgacctcgcatggtcagaggccacatcaacctgtgcaaagtcagtggccgctgcagtcattgcagggccgaaggccacagcagtcaccacaaaatacaaggccacaactgatgtcgaagagtcagagaccgcagcaatcattacagagacagagaccacagctatcctcacaaaatgagagattggaatcctcggagaggcaaaggccaccttcacaaagctacaggccacagtcgtcgcaagggcagaggcctagttcagtacaaggccgccagtactccgagcaaagaagaatccaggcaaatgatagagtaaagtcggcagaaaggcagataaggcctccctcgaaacccatggtaatacttctgcgaagcaaatttgtcagcttttcctttgttgtcatgtttcacatgcatttgggcaattatttaggatcatatgtttctctgaagcttatttcttcgctatcatgttcctgtagccatcacgacaaataccttccaacggaatgcgtgatgcccatgcaaagaaaaagcaaccgatgaaacgaagatttaatgatcttagcgaagatgaggaagatccgttggcaatgatcaggagcatgtttaggtatgtcagtttatgaatttcttgtatgtggtcctttctgcacaagctgggctagtcttatatactttgttggctagtgttttagttgttattgagtgtctacaaagagttggaatgatactctgaacagggaccttgcactagttatgctaagcattgttttctgatttcaagatctgctgaaaagatagatcaggcttgccattatgcatttcagtttggtgatttcttgaaatcaagtccatttgctttaaattttatggcatgcgaatgagctaattttggactatgcttccatactattttttgttttgaaggacactatatgaaaactttggttgtcctgtgcaggtatgatcctagtaaatatgcaggcagagatgacgatgatagcgacatggaagcagattttgctactatagaaatggaagagcaaagaaggtatgtactcccttattgctttctaacacaataccttcttttcatttagaacattataatctgttaaactatggtaagtgaagaaaaatagggatcattaaggattatcttatattctgcctcagtgaggaacataatggaaaaagaatgcttattttcgctataatattgtactatcacatgctaatttatgcatgattttgcgctgcatatgcacttgatcaagatgcatttgacatcatgattgagtatcatttccagaaacttgaactgcaggactgctgtacattcaaattcacttgtcatatggatattttgcttttaatctcttaacttattagctttttttttgttacctcttagcgcgagaattgcaaaggaggaggatgacgagcaacttcgcctgattgaggaggaagaaagacgtgagcaggagaggaagaggcgaaagatggcgcgtggccgatagtagcagctaagttgtacaaatgcttgagttacagcttgagcaaggcttgaactgcaattccacggtcgtacgggccatggtgcttgcagatgatagcacgctttacccccatttatttgccgtgcgatttctcaagagatctatcaagaaaaaaacggcagggatcaagcaaaacggcaggagaacgatgctccaacgtaatgtgaagtggtgtagcttgtgctgaaactgttagctgtgccaactacagatctttttgatgctgacgctgatcgtgcagaaacttctcccgtgagggtgtggtgatgccaacgtccctacaccttgtcactttgttgggttgtacatgatattcttcctcatgtagctgattcgttctgttggtcgagtactaaagatgccagaaatcaactggcgcctgtccgtgtttggattcgatttggatataccggtgttctaataaacaatgttttagacaattattactggactggttgaatgaattattgaagcgattatcggttagccgg</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0296800, RefSeq:Os11g0296800