Os11g0307300

From RiceWiki
Revision as of 09:08, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0307300| Description = Winged helix repressor DNA-binding domain containing protein| Version = NM_001074281.2 GI:297611690 GeneID:4350345| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os11g0307300

Description

Winged helix repressor DNA-binding domain containing protein

Version

NM_001074281.2 GI:297611690 GeneID:4350345

Length

1668 bp

Definition

Oryza sativa Japonica Group Os11g0307300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:11694758..11696425

Sequence Coding Region

11695064..11695363,11695535..11696347

Expression

GEO Profiles:Os11g0307300

Genome Context

<gbrowseImage1> name=NC_008404:11694758..11696425 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:11694758..11696425 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagctcagactcagaccatccaggttcctaacgatgccgagctgatgcaagcacaggccgacctgtggcgccacagcctctactacctcacgtccatgggcctccgctgcgccgtcgagctcggcatcccgaccacgatccatggcctcggcggcgccgccaccgtccctgacctgatggccgcgctgtccctccctgagaacaagctccctttcttccggcgcctgatgcgtgtgctcgtcacggcgcgcgtcttcgcctctgccgacggcggcgagaccgagcggttccgcctcactccgctgtcccgcatcctggttgacggcgtcgtcgccgacgagcaccatagccagaggtgcttcgtcctgggcaccacgtcgcgccactacgtggacgcggcgttcgcgctgtccgagtggttcaagaaggacctggcgtcgccggtgccgtcgccgttcgaggacctgcacggcgcgaggctgttcgacgagagcaccccgctgctcgacccggagctcgacgccacagtcaacgagggcctcgcggcgcacgacaacctcggcatcggcacgctgctccgcgagtgccgcgacctgttcaagggggtgcggtcgctgaccgactgctgcggccgccacggcgccacggcgagggccatcgtcaaggcgtacccgcacatcaagtgcacggtgctggaccttccacggttggtcgatcatgcccctcgtgacggtgtcgtcaactacgtcgctggtgacgcgttccagtgtaccatcccacccgcccaagcagtcatgctcaaggtatatcttgttctgcatcacttgagcgacgatgactgcgtgaagatcctagctcagtgcaaaaaggctattccttcacgaaaggagggcgggaagttgattgtcatagatatcttggttgaaccatctttggggcctgtaatgttcgaagcgcagctcatgatggacatgctcatgatggtgaatactagaggtcgtcaacggaacgaaaatgattggcatgacctgttcatgacagcaggattcagtgactataagattgtgaagaaacttggtgctcgagctgtcttcgaggtctatctgtag</cdnaseq>

Protein Sequence

<aaseq>MAAQTQTIQVPNDAELMQAQADLWRHSLYYLTSMGLRCAVELGI PTTIHGLGGAATVPDLMAALSLPENKLPFFRRLMRVLVTARVFASADGGETERFRLTP LSRILVDGVVADEHHSQRCFVLGTTSRHYVDAAFALSEWFKKDLASPVPSPFEDLHGA RLFDESTPLLDPELDATVNEGLAAHDNLGIGTLLRECRDLFKGVRSLTDCCGRHGATA RAIVKAYPHIKCTVLDLPRLVDHAPRDGVVNYVAGDAFQCTIPPAQAVMLKVYLVLHH LSDDDCVKILAQCKKAIPSRKEGGKLIVIDILVEPSLGPVMFEAQLMMDMLMMVNTRG RQRNENDWHDLFMTAGFSDYKIVKKLGARAVFEVYL</aaseq>

Gene Sequence

<dnaseqindica>1063..1362#79..891#acacgaaaacaccagacagggagcataaaagaagtgaaatatagtgtgtgaaagtgtgatcaaagaactgaacgagcaatggcagctcagactcagaccatccaggttcctaacgatgccgagctgatgcaagcacaggccgacctgtggcgccacagcctctactacctcacgtccatgggcctccgctgcgccgtcgagctcggcatcccgaccacgatccatggcctcggcggcgccgccaccgtccctgacctgatggccgcgctgtccctccctgagaacaagctccctttcttccggcgcctgatgcgtgtgctcgtcacggcgcgcgtcttcgcctctgccgacggcggcgagaccgagcggttccgcctcactccgctgtcccgcatcctggttgacggcgtcgtcgccgacgagcaccatagccagaggtgcttcgtcctgggcaccacgtcgcgccactacgtggacgcggcgttcgcgctgtccgagtggttcaagaaggacctggcgtcgccggtgccgtcgccgttcgaggacctgcacggcgcgaggctgttcgacgagagcaccccgctgctcgacccggagctcgacgccacagtcaacgagggcctcgcggcgcacgacaacctcggcatcggcacgctgctccgcgagtgccgcgacctgttcaagggggtgcggtcgctgaccgactgctgcggccgccacggcgccacggcgagggccatcgtcaaggcgtacccgcacatcaagtgcacggtgctggaccttccacggttggtcgatcatgcccctcgtgacggtgtcgtcaactacgtcgctggtgacgcgttccagtgtaccatcccacccgcccaagcagtcatgctcaaggtatatgtacacatctatattaaccactaagaaatcctatatcacatacatgcatatttaataaactatgaaccaataatatgccatctcaagatatatcaatcggcagaagctcttgaaactaaatttagtgtagtcatttctgcatggcctaatagttttctattttgcacgtagcttgttctgcatcacttgagcgacgatgactgcgtgaagatcctagctcagtgcaaaaaggctattccttcacgaaaggagggcgggaagttgattgtcatagatatcttggttgaaccatctttggggcctgtaatgttcgaagcgcagctcatgatggacatgctcatgatggtgaatactagaggtcgtcaacggaacgaaaatgattggcatgacctgttcatgacagcaggattcagtgactataagattgtgaagaaacttggtgctcgagctgtcttcgaggtctatctgtaggattgcttctatctaatatgcgcaatggacgtggatcgtgtgatgtgacgaaataaataaatggtgcaccataataatgactttggaatggaatttcacagatcatgcatgaagcggactgaaatcttaagctcggatacttcatgaactgtgcaagggttcatttcaaagatatctagcagtcgttgcgctagctttactgcacccatggcttgtgtttgttgtcgtatatgtgtgtactgccacagtttattggaaatgaatcttaagcctacgttagaattgcaaatagacaaagtattgagt</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0307300, RefSeq:Os11g0307300