Os11g0417400

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Revision as of 09:08, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0417400| Description = Protein phosphatase 2C-like domain containing protein| Version = NM_001074295.1 GI:115485238 GeneID:4350364| Length ...")
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Gene Name

Os11g0417400

Description

Protein phosphatase 2C-like domain containing protein

Version

NM_001074295.1 GI:115485238 GeneID:4350364

Length

6899 bp

Definition

Oryza sativa Japonica Group Os11g0417400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:14649582..14656480

Sequence Coding Region

14649899..14650093,14650853..14651221,14651317..14651434,14655166..14655389,14655545..14655937

Expression

GEO Profiles:Os11g0417400

Genome Context

<gbrowseImage1> name=NC_008404:14649582..14656480 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:14649582..14656480 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggacatgccttacgacggcggagcagcgggccatggaggtgccggctgcgtcggtgaagggaggagggggcaggaggagtgacgaggaggcgcccggcaggatcgcgggtaacggcgcggggaatgtggcctgcctgttcactcggcaggggaagaagggcaccaaccaggatgccatggtcgcgtgggagaactataacggaagatcagacacggtattttgtggagtttttgatggccacggtccacatggccatctcattgctaggaaagtaagagatattctcccttcgagactctgtgatttgatatatgaagactgtggggatagtccaaccagcaattcagatgtctcaactctggaagagaatttatctccgtatgcagatgcagagtgcagatctcccacattggctggacaaaaagaacatcaagaattcttcaacgcaatgaaagaatctttcagaaaggcttttaaaaatgtggataaggagctcaaattacaacggaacattgatagcatttgcagtggaactactgcagttactttaatcaagcaaggtcatgatcttattgttgggaatctaggtgactctagagctgtattaggcaccagagatcagaacgataagttggttgctcatcagttgactgttgacctgaaacctgatcatccaagggaggctaggaggatcagacggtgtaatgggagggtctttgctcatcaggatgaaccagatgtggctcgcctttggcttcctaattgcaactctcctggactggcaatggcccgagcttttggtgacttttgtctaaaggattttgggttgatctcagtacctgatgtcacctataggcaaattactgaaaaagacgagtttattgtcctggcgacagatggggtgtgggatgttctctccaaccaggaagtggtggatgttgttgcctcatgctctggtcgtttcgctgcagctcgttctgttgttgatttagcaaatgagacttggaggttcaaatacccaacctcaaaaactgatgattgtgcagtggtctgtcttttcctgaacaagtatgaagttaccggtggtttatcagggcaacctggatatagtccaaggatgcctgccctatcaggtattacccggcccaatagtaaaagggttactcctgacgacgtcgatgatggtagtgactcaaacgtaagcggagatgagaggtccttggatggtttcactcgattgaacacattgttggcactaccaaagtttggtgacacaagtccaactaagaaatga</cdnaseq>

Protein Sequence

<aaseq>MGTCLTTAEQRAMEVPAASVKGGGGRRSDEEAPGRIAGNGAGNV ACLFTRQGKKGTNQDAMVAWENYNGRSDTVFCGVFDGHGPHGHLIARKVRDILPSRLC DLIYEDCGDSPTSNSDVSTLEENLSPYADAECRSPTLAGQKEHQEFFNAMKESFRKAF KNVDKELKLQRNIDSICSGTTAVTLIKQGHDLIVGNLGDSRAVLGTRDQNDKLVAHQL TVDLKPDHPREARRIRRCNGRVFAHQDEPDVARLWLPNCNSPGLAMARAFGDFCLKDF GLISVPDVTYRQITEKDEFIVLATDGVWDVLSNQEVVDVVASCSGRFAAARSVVDLAN ETWRFKYPTSKTDDCAVVCLFLNKYEVTGGLSGQPGYSPRMPALSGITRPNSKRVTPD DVDDGSDSNVSGDERSLDGFTRLNTLLALPKFGDTSPTKK</aaseq>

Gene Sequence

<dnaseqindica>318..512#1272..1640#1736..1853#5585..5808#5964..6356#gtgtcatcgtcggccttgctgcccatgacgcgatcaagaaacgccaccgcccctccgttcttccagagatcgaatcttgggggatcgagctagttggggttagcggtgtggaagggtcgaaaatccttggagacattggattggattgcagtggggcggacggcggtgggcggggcttcttgtaggctgggctgtaccagagaggagccaagacggcggcgataacggcggcaccggtggcgacggcgccgtcgccgtcggagggtgggggaggcgggtgcctggattgtctgcaggatgtggttcgggcgctgtcgatggggacatgccttacgacggcggagcagcgggccatggaggtgccggctgcgtcggtgaagggaggagggggcaggaggagtgacgaggaggcgcccggcaggatcgcgggtaacggcgcggggaatgtggcctgcctgttcactcggcaggggaagaagggcaccaaccaggatgccatggtcgcgtgggaggtatctggaccccaagatctcgaatccctttcttcttttgttcactgctcgtccacttttcagttgtaaacgtgagcttttttctttgtttaattggcaaacggatctaacttgcatggattacttgtaagttcagcagatttcttctttccttatctttttttttgcggggaaaggttcagcagatttcgtagtattacctatgtgtagtggcaattgagttgattctttctaacgaaaaagaaaatttctgatgcctcaataatttacaagaaaatttaaactgttgtttgcctttgtaatttttcaaatgaacattttttatgttaccaagcgatgaaggtaaatctacattatctttgtttgctgtagtttatcgatttgtttctgttattttacgttgttcactaatacaaatagcttgtttataatatttttggccctcaacttatatttctgatgtaatggtctatgcctgataaaatgctcgcagaaagggcagcaacaaaatgttacttatctggtaccattggtgagctgtatatataaatcaaatgaatggcgttattttgaattctaccttttctttctaacaactccaagtcccaacttttgctctctaacctttaaatggattaattacatgttctctaagtatcatgaatgagtgtctccttcaacacttctgttacatctttcttatgtcttctcattatgtgtactattaacaccctgtgaacactatggaacaatggacagaactataacggaagatcagacacggtattttgtggagtttttgatggccacggtccacatggccatctcattgctaggaaagtaagagatattctcccttcgagactctgtgatttgatatatgaagactgtggggatagtccaaccagcaattcagatgtctcaactctggaagagaatttatctccgtatgcagatgcagagtgcagatctcccacattggctggacaaaaagaacatcaagaattcttcaacgcaatgaaagaatctttcagaaaggcttttaaaaatgtggataaggagctcaaattacaacggaacattgatagcatttgcagtggaactactgcagttactttaatcaagcaagtaagcagtttcctctttttgatgtaacaaaatatatttactattacttaagaatttcatatgcagactatctaaaatcgtgtctatgccatcagggtcatgatcttattgttgggaatctaggtgactctagagctgtattaggcaccagagatcagaacgataagttggttgctcatcagttgactgttgacctgaaacctgatcatccaagtaatctctttcactcctaactttaagttactttaatcttctgtattttctcttctaagacatgatgcattgagcaagttcaacttggatgtttttatggtgatattaggctaaagtgttcccttgcatttcctttttccaagataaatattgagcaaaaagtatacactgtctttgatttatttgagtgttcaacctgccacgctgccaatgaaaagaatctcaacccaccttggtagactcactgcagactttttcttatagcagcaacactaagaccattagccccgttgatagatctcaacaactcatatgttgtttagcacatgcaaatcagcttaatattatgcaatgtgtgaacacttggcttaattttatgctccctcctgtctagtgtttacccctcagatgctagataggtcgccgggtggtagtcgtgctgcgccttgtacaatgcttagtagtgaaaacttggcttttctagatgctgcccttgttccatttctatacattccagataggtccttctcaaatactagacaccacaaagtacaacagtagcatttgcacaatgaaagcaaaatagttgacaccatcaatggagaatagaggcagcatgttcagtgactcagaagcctccagcagggtctgataggactatggtacacattgacatcccttacagtggccttactgtgatcctagtggaaaaaaccagatcatacctgcggtttaaccaaaaagaaccggaaccagctcattgattcaattgtgtccaaagatcattcgtgcatttgtaccagtttacaccgcctggtttcgaggtatgcaaagcattaaactgggactagttggactggctggagagagaagagtgtaaggctgaacaaaggtctatttataccttaaggcccaagggtgtgatttgacccttggtctagaggtttaagtcagtcaccctttaccatgacttaatcaggaaccggtgaactgacagcttggccggttcatcttctccagatggcatggatgtcaagaaagatgaccgctgtcttgttattgccatttctattagttatctaaaaataccatattaactttttttatgaaatgttgtattggcatacccatattgctgaaggaaacattctgttgctagggatctaccaagagtaaaagtttacattttgtaccgatattttaatagcgaatcttgtgttacaagattaaatcactgtaactgctatttgccattaaagtcatctgtaagagcatctccaagagttccctaatgccagctccaaaagataaattttaggaatctagtctaaaaccatgtctccaagagatgcccaaagaaggtcccaatatttaccgacaccctaaaccagaaccgatctgaaccaattttggacacctccacgcactcccaattgatgaaatcgggaggtttttgctgctcgcgccttttcttcccctgtcgtgccctgacgcgagatggccaagccctggccttgccccccacaacgtgccttgcagacttgtcaatgacctcgccgtctgctgccgcagctgctaggtacgcgcaagatcaccctcctgcacagcatagctgagcagctagcgtgccattggttggcagcacccagctccgatctccctcttactggaaaaatggaaagacaaaaggttgaagcaggatctacttaagatgatgtggcatattattattgcaaaccaaatttaggcgcactcttggagtcggaggtgatttttgggcccaatttcttttcggatggtcccaatccaagatttttaggagttaaattttaggatgctctaactaccaattaatggtgtgtatgtatggtcagttactaataatttaaaacaaaaaagataaaatgatctcttccataggtattttgctacctacagtactttgttttgtacctgcttgtgctaaactgataatgtgtaaatatgatattgagtaaatcgcatactagaccaccattttttgccatggttgcagtttggactaggggctaaccactcttttcactttgagctaggaatacttgcaaggtgttgtttttttttctcctcctagacctgttcttcctctcccctgctctctctctctctctctcatgttcttcctcccactcctctctctcctgttttggtttgagcctcaacgtgatggtgagcatctcctgtttgcgtcagctcatgggatgaaacttctgccccaccatgatggtggacagaaaggggaaggagaactcaaggaagaagaacacaggtccagagtgcaacttcttacaagaattcctagcccaaagtgagaagagtgggtagcccctatttcaagctgaaattattatggtaaaagaagatgctaaaatgcaatttactctatgatatttgtacctttagatagtcgttggcagtaagcacaattatcgtgaatcatcatattatgttcataatatcatattgataacgttaagcctgtgaaatagaatgtaaccagtgcagcatctttaacatgctgacttgtcatgggccttgggccaggagactgaggcccatgaccaagcccaagaggaaggcgtggtcaaccagggtacacgtgttgtgagcatgaaggacaataggcacacactattaccatgtcagaggaggtttccagagctaggggattatattagattggattattaggtgccagtctgtataagggtactcggcaaatgtataagatcgagcaatgaagaacaatctataaattgcccagttcatcacctcagcttatattcctcctcaaatccctagcagctgaatgcactactatcctcccagtagagtttattgccaatgaaaccttgcccggccgtaacatggttttattagaatgaaagacaccaaaatacgatatgaagactgaataagttgatgaagtgaatcaatgcttaagaagatgcaagcatagaataagaatataaggtggtaacaactgtaattgatgttgttcatcgcacataaggatggaatgatatatggtagaaaaacagagtatgttcaacttaaatcacatattttaattaattttacagtgagtgattactgcttatgttttgcccatcctcattagtcgtttttctctgtatgatctgtaaactgtagtagtagatttaccatcttcaggagatgcaatcttcagcactcattcttcaagaaagaaattcaagaattcaaacaccgattataaattcaaagctatctactgtgactcgtattcttgttaccctatgtttataaacttttgttctcttggacagatgatttaaaattaaattatcatgcacaaagattgtgcagtagttagcttgtttctttccatgttatgtatcaattcctttcacagcaagttctgtgttgtatggttatttgatgtattatatcttgttgactcatcatccatcagaacagctattctgatgagactatggttctgtgcttctactttagctatatgttttgcatgtacttttacatcttagttatcaaaaataaactctaggacatcttgctaggccagcacatttttcttgtgaatttttttcagccgttagtctgttgggaattgtcaccttgctccagtctaaataaatacaattttgagcataatcttgaaaataataacataatgatattctttccaggggaggctaggaggatcagacggtgtaatgggagggtctttgctcatcaggatgaaccagatgtggctcgcctttggcttcctaattgcaactctcctggactggcaatggcccgagcttttggtgacttttgtctaaaggattttgggttgatctcagtacctgatgtcacctataggcaaattactgaaaaagacgagtttattgtcctggcgacagatggggtaggtaacaaaaaatgattaacaattattttctaagtggcttcttcaaagagaagaaatagttcttaatcaaaatatgtacttcccaatttaaaatcgttggactgttttgtcttggctggctctgatacactattattttacattgcctacaggtgtgggatgttctctccaaccaggaagtggtggatgttgttgcctcatgctctggtcgtttcgctgcagctcgttctgttgttgatttagcaaatgagacttggaggttcaaatacccaacctcaaaaactgatgattgtgcagtggtctgtcttttcctgaacaagtatgaagttaccggtggtttatcagggcaacctggatatagtccaaggatgcctgccctatcaggtattacccggcccaatagtaaaagggttactcctgacgacgtcgatgatggtagtgactcaaacgtaagcggagatgagaggtccttggatggtttcactcgattgaacacattgttggcactaccaaagtttggtgacacaagtccaactaagaaatgagttggtaagcagatgagttttgcaggtgctttggacaagagagcatatcggctatattagcatgtccggtgagctcccgttctgatccagcttacgatagctaagaatgagtagggttgttttttttttttcatcctaactcccatttggttacgagttgacaattacgcagcaagcatttggagtcttaactcttatttagtcgagagtagacttaacctttttgtatagctgctcatcgattttctgtcttattgtatgtacttggcgattatatgtggacaaatcctactcattcttatggtaatttcgtttgtcggattatgacagttggaaccttttgctcaaaaggttcgtatgcgtttctaaaaaaagggggttcgtatgctctagtcgcatgcaactatgcaagccggagaaggtctaaaaggccaacgataggggtaaaggataaattccttatatatgaaacggatgtaattacacagctagttctagctggtttgtctaatacaagagacaccttccacctatacttcaaat</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0417400, RefSeq:Os11g0417400