Os11g0435500

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Revision as of 09:09, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0435500| Description = Raffinose synthase family protein| Version = NM_001189587.1 GI:297728304 GeneID:9270658| Length = 2630 bp| Definiti...")
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Gene Name

Os11g0435500

Description

Raffinose synthase family protein

Version

NM_001189587.1 GI:297728304 GeneID:9270658

Length

2630 bp

Definition

Oryza sativa Japonica Group Os11g0435500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:15957922..15960551

Sequence Coding Region

15958995..15959211,15959331..15959401

Expression

GEO Profiles:Os11g0435500

Genome Context

<gbrowseImage1> name=NC_008404:15957922..15960551 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:15957922..15960551 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cagagcgttcatccgatggctgaataccatgctgcagcaagagcagtcagcggctgtgccatatatgtcagtgacaagcctgggaaccatgacttcaatctgctgaagaagctggttcttcctgacggatcgatcctgagagccaaactccctgagaatgccatgacgatccagtgcgagtcaatgtcgtcgtcggtgcggtcgtcttcgtgggtgaaagacgtcggtacggcgtggacgaccatgacgttgctaagcagctgcagcgcgccgcgcagtcctcaatga</cdnaseq>

Protein Sequence

<aaseq>QSVHPMAEYHAAARAVSGCAIYVSDKPGNHDFNLLKKLVLPDGS ILRAKLPENAMTIQCESMSSSVRSSSWVKDVGTAWTTMTLLSSCSAPRSPQ</aaseq>

Gene Sequence

<dnaseqindica>1341..1557#1151..1221#aggcgggcgcacgcgcgggggccgatggatggggagcggcggctagtaagtggcggtggcggaggcgctggaggtggcggcgtgatggcggtgggcatggtggtcgtcggcgtcggcgtgccccgcttctcccagtggtcgtcggcgtcggcgtgccccgcttctcccagtggtcgtcggcgtcgccatggtggtcgttgttgtcgccatagtggtggtctcagtggcgacagatgtggtggccagcgtgcggcgtgcaggcgggcggggccaggagatggtggccagcgtgcggcgtgcccgacgacagcggcgaaggaggctcaacagtcggcggaggcgcgccgcctacaagccgagcgttgactcacataaaggagaaccacaaatttcagctaaacaggaggaaaggtcaaagggaagagaatccagcaaatggccttgcacaccttgtcattgaaattaagaacaaacatgagctgaagtatgatgttctcttctaatagctcctccttttattgagtttatgcctgtcaattttcaaccaaattcatcttcgtcacaaaaaattttgtgtcaaaaatttcaggtgtgtttatgtgaggcatgcgattaccgtatactggggtggtgtaaggcctggtgctgatggaatggagcactacgaatcgaagatgcagcacccggtttcatcaaccggagttcagaagaacgagccatgtgatgctctgaacagcataaccaccaatggccttggccttgtgaaccctgacagagtgttcagcttctacgacgagctacacgcctaccttgcatcagctgggatcgatggagtgaaagtagatgttcagaacattcttgagacactgggtgctggccatggaatggtggttttggttgtttacatgcttctgctgatgatgatgcagttctaagaggagtgcagttgtgagagcttctaatgatttctgacccagagaacatgcctcacatactatacatattgcatctgttgcatataatactgtatttcttggagaatttatgcagccagactgggacatgttccatttgagaatcatcactacattcctttgctaccatggattatgtgatgtctaagctgataatctgaatttcttttggttgacagagcgttcatccgatggctgaataccatgctgcagcaagagcagtcagcggctgtgccatatatgtcaggtataaccagaatgtgtattcttcaacatacataaataaaattctctgctttgtagtgcagtgagttcttgatgctaagttagatgttcatgtgtgcatatatatgtgtgatgttgcagtgacaagcctgggaaccatgacttcaatctgctgaagaagctggttcttcctgacggatcgatcctgagagccaaactccctgagaatgccatgacgatccagtgcgagtcaatgtcgtcgtcggtgcggtcgtcttcgtgggtgaaagacgtcggtacggcgtggacgaccatgacgttgctaagcagctgcagcgcgccgcgcagtcctcaatgacgtacggccgctgccgctgctcacctgctcctgcggccgcgggtagttcgagtcacacgacggcgccgtttccgattgcacgcgcgtacgcttggctgcaggcgaagtcgtaggtgtcgtcggcttctccttctccccgccggtcaccgcctgtcgacgacgtcccggcaccactccacatccgccggccgccgcgctgaagcagcaacggggttcccgatcttcgatgagaggtggataaactttgatttgatgctgcgccttagcaaccggtacaccgactccacgttgttgctgttcttgtcgtgccaagaacaaccttgaacctacaagcaatcgaagaacaagcaagaacaagttgacaaggaaacagatcacggcacttgtcatatgatgaaactgaaacaaaccaaaatggggttctgaatacaagtatccaggtggtctagccgatacacgcgagtacaatgaagtagctgcagctaaacttacatccaaacaaaaacccaaactgcaaaatgggggctgctaggagtttatataggtggagaaatgaccaggagaggaggtgggagcaaaccctaggttttatggacccctaatgggctgtaaagatacaaaggcacaagcccaagtttcagatgcgaaaactattttggtcattctgagcagctcggttcgaatctgaaggtgaggttgggcatatctgaaagtagacaacaagatctttccaacgagtactcatatggttgaaatggagctcatatgcaaatttggcgcccgtttgaagccaactctattgcaggtggccgaattggatttccgaagttgtgtgggatcttgatgacttccatttgatgtatgatgtgagcaatggttctatctgtagtaggcatggtcacatcatcctctcctttttcacagaaaaccgtcctcagttttgccatatggtgctcttcacgtagtgcatgatcttgcccatagaagagtgtacatgaaaacaaatgcaacaaattcttgtcatgtaatatcaatagttctttagcaaatagaattattctccagtgagacgg</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0435500, RefSeq:Os11g0435500