Os11g0442900

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Revision as of 09:09, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0442900| Description = Zinc finger, C2H2-type domain containing protein| Version = NM_001074350.1 GI:115485348 GeneID:4350427| Length = 170...")
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Gene Name

Os11g0442900

Description

Zinc finger, C2H2-type domain containing protein

Version

NM_001074350.1 GI:115485348 GeneID:4350427

Length

1706 bp

Definition

Oryza sativa Japonica Group Os11g0442900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:16429248..16430953

Sequence Coding Region

16429379..16430734

Expression

GEO Profiles:Os11g0442900

Genome Context

<gbrowseImage1> name=NC_008404:16429248..16430953 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:16429248..16430953 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagggtggtaattccagcaagggcgccatggagggtggtcaccgctgccgccgcccaaacgtcgacgacgatgaccagatcgaggagggagagatctgctacgactgccacgtctcgggctccgagaccgacgacgacgagcaccacagacgcgccgtgctccctccccgcgacaatggcgatggctgcgcggagcacaaacggtgccgcctcgacaatgctgctacggcgcccgcaccctctgccgggccggtgctgaccaccagcaacggaagcgccatcgtcgccatcgcctccgctgccgccgccgcagcagctgcggcgtcgacaatggcgcgggaggtgttcgcgtgccgcatctgccggaaggagttcgacacccggaaggccgtggacgggcacatgagagttcaccgtcagcaatccattgccacccccaagtataatgccgcagacaactctcgtgtcactgtggtcgctgagcccagaaccgatcttgatctttccggtccacacgggagcagcagcgcgccgccgtcgccaccagcgccggccaatcctcccaatcataatcaggccgtcggtcaccaaccagcggctgccgcgccgaacgccggcgtcgtcgtcgtcgtcgaaggggcgccgcaaaaaagtctaccatacatgtgcaagatgcagggctgcggcagggcgttccccacgcaccaggggctaggtggccacgctgccggccaccagaacaggagcaaggcagcggcggcggcggcctccgagcagggcagcagcggagcgggggccgacgggtgccacggcggcgccgacagcagcaagcatcggtgcagagaatgcggcatggagtggaagacaggtttcgcgctcggcggccacatgaggaagcaccaaactaaggagacggtgaccgtgaacgagaaggagccgaatgtcgctggcaagcacatctctcttggaccaccacctttgccggaccttactccggccgccgctgaggtaacttcgtcggaaccacttgatcagccaccactactgtcaatggtggtgggtgcagaagttgcagcaccggcgctgcttgcgctggccaacgaggcagcggcattgccgccacaggatgatcaggcagaggaagaggcggctgcagaagccgctgcaccggccgaggcagcggcattgcgaccggttgaggcaggggcagaggcggccgatgttggagcagcaccagaggagccgctgctggcgcctattgccggcatgggaaccgtgcgtattttcggttttttggttgagaagccggcacctggagacggcagtggaggagagggttcagcgcctgcatag</cdnaseq>

Protein Sequence

<aaseq>MEGGNSSKGAMEGGHRCRRPNVDDDDQIEEGEICYDCHVSGSET DDDEHHRRAVLPPRDNGDGCAEHKRCRLDNAATAPAPSAGPVLTTSNGSAIVAIASAA AAAAAAASTMAREVFACRICRKEFDTRKAVDGHMRVHRQQSIATPKYNAADNSRVTVV AEPRTDLDLSGPHGSSSAPPSPPAPANPPNHNQAVGHQPAAAAPNAGVVVVVEGAPQK SLPYMCKMQGCGRAFPTHQGLGGHAAGHQNRSKAAAAAASEQGSSGAGADGCHGGADS SKHRCRECGMEWKTGFALGGHMRKHQTKETVTVNEKEPNVAGKHISLGPPPLPDLTPA AAEVTSSEPLDQPPLLSMVVGAEVAAPALLALANEAAALPPQDDQAEEEAAAEAAAPA EAAALRPVEAGAEAADVGAAPEEPLLAPIAGMGTVRIFGFLVEKPAPGDGSGGEGSAP A</aaseq>

Gene Sequence

<dnaseqindica>132..1487#ccacagccaccgagcggattagtggaacaaaccctagcctgagtagattcttcctctagctttcgcgagccgtatcgtatccattggatggagccctagagcaacaagaagaagccaagaatatttgcgccatggagggtggtaattccagcaagggcgccatggagggtggtcaccgctgccgccgcccaaacgtcgacgacgatgaccagatcgaggagggagagatctgctacgactgccacgtctcgggctccgagaccgacgacgacgagcaccacagacgcgccgtgctccctccccgcgacaatggcgatggctgcgcggagcacaaacggtgccgcctcgacaatgctgctacggcgcccgcaccctctgccgggccggtgctgaccaccagcaacggaagcgccatcgtcgccatcgcctccgctgccgccgccgcagcagctgcggcgtcgacaatggcgcgggaggtgttcgcgtgccgcatctgccggaaggagttcgacacccggaaggccgtggacgggcacatgagagttcaccgtcagcaatccattgccacccccaagtataatgccgcagacaactctcgtgtcactgtggtcgctgagcccagaaccgatcttgatctttccggtccacacgggagcagcagcgcgccgccgtcgccaccagcgccggccaatcctcccaatcataatcaggccgtcggtcaccaaccagcggctgccgcgccgaacgccggcgtcgtcgtcgtcgtcgaaggggcgccgcaaaaaagtctaccatacatgtgcaagatgcagggctgcggcagggcgttccccacgcaccaggggctaggtggccacgctgccggccaccagaacaggagcaaggcagcggcggcggcggcctccgagcagggcagcagcggagcgggggccgacgggtgccacggcggcgccgacagcagcaagcatcggtgcagagaatgcggcatggagtggaagacaggtttcgcgctcggcggccacatgaggaagcaccaaactaaggagacggtgaccgtgaacgagaaggagccgaatgtcgctggcaagcacatctctcttggaccaccacctttgccggaccttactccggccgccgctgaggtaacttcgtcggaaccacttgatcagccaccactactgtcaatggtggtgggtgcagaagttgcagcaccggcgctgcttgcgctggccaacgaggcagcggcattgccgccacaggatgatcaggcagaggaagaggcggctgcagaagccgctgcaccggccgaggcagcggcattgcgaccggttgaggcaggggcagaggcggccgatgttggagcagcaccagaggagccgctgctggcgcctattgccggcatgggaaccgtgcgtattttcggttttttggttgagaagccggcacctggagacggcagtggaggagagggttcagcgcctgcatagatcgtcctagttatgatatttgattttgtgattttctttagctatcttcagagccattaggatacttgatttagaggctttctttattatgttcaccgcatagtagttaagataatttttgcttttcgatagcagaagtgttttcttcgttgtactagctagttggccgggttttcgaggttaaagactataagaaacttacagttatatatggtgtgc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0442900, RefSeq:Os11g0442900