Os11g0465200

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Revision as of 09:10, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0465200| Description = Similar to Bx2-like protein| Version = NM_001074401.1 GI:115485450 GeneID:4350483| Length = 3702 bp| Definition = O...")
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Gene Name

Os11g0465200

Description

Similar to Bx2-like protein

Version

NM_001074401.1 GI:115485450 GeneID:4350483

Length

3702 bp

Definition

Oryza sativa Japonica Group Os11g0465200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:17783132..17786833

Sequence Coding Region

17783325..17783951,17784443..17784877,17786311..17786790

Expression

GEO Profiles:Os11g0465200

Genome Context

<gbrowseImage1> name=NC_008404:17783132..17786833 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:17783132..17786833 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgagatggctgcacgaacatggttgtggttgctactgtcccctctcatcctcctactgctgcactatgctctggccctgctaactgcacgccgagcgaggaagaaccccttgccaccttcacctccagccttgccattcatcgggcacctccacctcatcggcgccctccctcacgtctccctctgctgcctcgccacgaagcatgcgcccgacctcatgttcctccgacttggcacgtcgttgccggtgctcgtcgcttcctcgccctgtgccgccgaggccatcctgcgcacgcatgacgacgtgttcgcgtcgcggccacgcaccgttctagcggatatcatcttctacggctcgcgcgacattggcttcgcaccgtatggcgaggattggcggcaggcaaggaagcttgtgaacacgcacctgctgagtgtcaacaaggtgcagtcgctatggcttgcccgtgaggaggaggtgaaaattgtgatggagaagataagcaaagcggcattcgcacgtgaagcagtggatataggccagattctttgctcattcacaaacgatctcgcatgccgtgttgtgtcaaggaagttagtcggggatgacaggcagaaaaagctcctccaagagttggttaataagacaataaagctgctttctatcttcaacgtggaggagtacttttcaattttagctcggattggcgtgattgggaaggtgatgtgcgcaagagctgagaggttgaaaaagaagtgggacatgctgctgaaaaagctgatcgccgaccatgagagcaagtgcgattcatacttagtatgtggccgtaacaaagatgactttgtggacattttactgtctgttaggaaggagtatggtctcaccgaagaacatgtcaaagctattcttgaggacgtctttattgcgggaacacagtcgtctgctcgggtgatcgaattcacctttgctgagctcatgcggaagccacacatgctcaagaaggtgcaggatgaggtgagggcttgcattcccaatggacaagcaattgttagtgaagttcaagttaacaacatgacttacctgagagcagttgtgaaggaggtactaaggctgcaccctgtggcaccactccttgcgacacacgtctccatggctgactgcaacatcaatgggtatatgatcccttcagggatgcgtgtcttggtcaacgcctgggccattggtagggacgaacgcttctggtatgatccagagaagttcatgccagaaaggtttgttgaaagtgtgaatggttctgccactgcgtcagtcaacttttgggtgaataactatcaatacttgccatttggttctggaaggagaatgtgcctcgggatgaactttgccatggcagttatcgagatcacactagcgaaccttctctggaaatttgattgggcgctgcctgcacatgcaatggaggttgatatgtcagaagagtttgggttgtcggtgcgtctgaaagaaaagctattgttggttccaaagcaacatgtgtag</cdnaseq>

Protein Sequence

<aaseq>MDEMAARTWLWLLLSPLILLLLHYALALLTARRARKNPLPPSPP ALPFIGHLHLIGALPHVSLCCLATKHAPDLMFLRLGTSLPVLVASSPCAAEAILRTHD DVFASRPRTVLADIIFYGSRDIGFAPYGEDWRQARKLVNTHLLSVNKVQSLWLAREEE VKIVMEKISKAAFAREAVDIGQILCSFTNDLACRVVSRKLVGDDRQKKLLQELVNKTI KLLSIFNVEEYFSILARIGVIGKVMCARAERLKKKWDMLLKKLIADHESKCDSYLVCG RNKDDFVDILLSVRKEYGLTEEHVKAILEDVFIAGTQSSARVIEFTFAELMRKPHMLK KVQDEVRACIPNGQAIVSEVQVNNMTYLRAVVKEVLRLHPVAPLLATHVSMADCNING YMIPSGMRVLVNAWAIGRDERFWYDPEKFMPERFVESVNGSATASVNFWVNNYQYLPF GSGRRMCLGMNFAMAVIEITLANLLWKFDWALPAHAMEVDMSEEFGLSVRLKEKLLLV PKQHV</aaseq>

Gene Sequence

<dnaseqindica>2883..3509#1957..2391#44..523#gcctagaacttgcatccctgaactgttctacaatatagatctcatggatgagatggctgcacgaacatggttgtggttgctactgtcccctctcatcctcctactgctgcactatgctctggccctgctaactgcacgccgagcgaggaagaaccccttgccaccttcacctccagccttgccattcatcgggcacctccacctcatcggcgccctccctcacgtctccctctgctgcctcgccacgaagcatgcgcccgacctcatgttcctccgacttggcacgtcgttgccggtgctcgtcgcttcctcgccctgtgccgccgaggccatcctgcgcacgcatgacgacgtgttcgcgtcgcggccacgcaccgttctagcggatatcatcttctacggctcgcgcgacattggcttcgcaccgtatggcgaggattggcggcaggcaaggaagcttgtgaacacgcacctgctgagtgtcaacaaggtgcagtcgctatggcttgcccgtgaggaggaggtaacaagtgttacttcatgccttcatattaataactgtccaagttgtaaagattgggaccttgtttctccgaaccaacatattttgtaacttgttttcatatttcaaggatgatcgattacatcatttaatgaaataataagatatagatcctccgtttcaggttataagttcgttctggccaagtttgtacgagtagaaaaaaaatagtaacattttcaaccgaagataaatttattatgaaaatatattcaattattgatttgatgaaactaatttagtatatatgtgtttataaatttagtcaaacttgaaacaattggacgttgaccaaagtcaaaacgacttagtaagacaactatctttgctcccaaagtctattgattggagaaaagaaaaaaatgtttttgatgctggtgcttcaaaattatgacagtgtaatttgatcaccctgactacacgaatctcaaaatcctgatgcgtttatctagtattggtctgatcttcaaatatttcattacctttcctttggtactctcgaggacttctaactattttcatgctagattttctactatatatattaatagattttctactattactttcataatatgttattttattatttctttggtttaactattacctgaaaagatcgtgataagttgtaaattccagagtcaaatagtggatggaattatcttcctgggcattcaagtaccacaaaatttaacccacttttcttaataccactaccacgattttcatgccgactatgtttatttagacaaaatggcacatccagttgagctacttcgtacttcaccagtggaacttttatgcttgccatcttcacacctccttcctactcctaatcctgaaatattgtaatagaagaaggtgaaacccatctcataagaacaaattgagagtacaagaaaccatctccatacttgtagcctccaagttctacttgcgcatgataagatcaatctgggatgacaataacagaccttaggaaatgggagggtattgcatttgaagttagggtattttggatacttcattatctgtattgggttgagaattcaacaaactctaaaaagagtgacggtagtgatattcttgaaagaagaaaatgacgtgtgttttgactttacatgaatgggaaagttcgtgtggtatttttctgaatttgacgtgccacctatgctatgaaccgaattttccttcttctttactacggcacccaattattaccatttggaatcattaaattggtcatgaaaaccttttttttttgtcaagctgacttatggaacaagaatagttaagttattctgtaagttgatgttctgaacttaattttgtgttggttatgcaatacttgcaccaacgtatatacaatttaaaaccataaaatgtgataggtgaaaattgtgatggagaagataagcaaagcggcattcgcacgtgaagcagtggatataggccagattctttgctcattcacaaacgatctcgcatgccgtgttgtgtcaaggaagttagtcggggatgacaggcagaaaaagctcctccaagagttggttaataagacaataaagctgctttctatcttcaacgtggaggagtacttttcaattttagctcggattggcgtgattgggaaggtgatgtgcgcaagagctgagaggttgaaaaagaagtgggacatgctgctgaaaaagctgatcgccgaccatgagagcaagtgcgattcatacttagtatgtggccgtaacaaagatgactttgtggacattttactgtctgttaggaaggagtatggtctcaccgaagaacatgtcaaagctattcttgaggtaattaattactccgagtgtactctaaaaattatttattatgcatagtatagcatgaataaaccattcttggctatgcacaattgcacaagacatttatgagttgttccaatcatcatattagacagctccatttgcaattgtcgggatattcaatagtcatattttaattagaaaaatgggcatgccttattttgcaatttgcataagccaagcatcaatttcagaaagtatttcaggaaatacaatcaaagactgttttgtagatccatttttacttacagactcaaactgatttacccaaatctagtcgaacaatctattcacacaaaatgttaaaacctgcatattacaaagtaaaatgtgtcaatgttcactctctgcattgaaacctataatctaattgtgcataaaagtgtcaattggataaatatattgtaatttaacagggtcatcttaagtttgatcttcaccaaattataaaccaacaggacgtctttattgcgggaacacagtcgtctgctcgggtgatcgaattcacctttgctgagctcatgcggaagccacacatgctcaagaaggtgcaggatgaggtgagggcttgcattcccaatggacaagcaattgttagtgaagttcaagttaacaacatgacttacctgagagcagttgtgaaggaggtactaaggctgcaccctgtggcaccactccttgcgacacacgtctccatggctgactgcaacatcaatgggtatatgatcccttcagggatgcgtgtcttggtcaacgcctgggccattggtagggacgaacgcttctggtatgatccagagaagttcatgccagaaaggtttgttgaaagtgtgaatggttctgccactgcgtcagtcaacttttgggtgaataactatcaatacttgccatttggttctggaaggagaatgtgcctcgggatgaactttgccatggcagttatcgagatcacactagcgaaccttctctggaaatttgattgggcgctgcctgcacatgcaatggaggttgatatgtcagaagagtttgggttgtcggtgcgtctgaaagaaaagctattgttggttccaaagcaacatgtgtagctgctagcaagtactcgaaggaattgaattgtccaactttaatgtgagaaagtctaccatgacctatgggggtctacactaatgttaacctctggacaaagtcattatacaccgtttctctatgcttcaacccttggaggatccaattcttatcacaaaatatgtgtgtaacaagtaataatttttgcatggt</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0465200, RefSeq:Os11g0465200