Os11g0470200

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Revision as of 09:10, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0470200| Description = Protein kinase-like domain containing protein| Version = NM_001074404.1 GI:115485456 GeneID:4350486| Length = 5672 b...")
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Gene Name

Os11g0470200

Description

Protein kinase-like domain containing protein

Version

NM_001074404.1 GI:115485456 GeneID:4350486

Length

5672 bp

Definition

Oryza sativa Japonica Group Os11g0470200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:17971468..17977139

Sequence Coding Region

17971468..17971779,17972171..17972321,17972391..17972622,17973096..17973309,17973458..17973585
,17974565..17974687,17977076..17977139

Expression

GEO Profiles:Os11g0470200

Genome Context

<gbrowseImage1> name=NC_008404:17971468..17977139 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:17971468..17977139 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaaaaactctagatcagttaaaatccaaagaagaaaacaaggctctgataccagttgtagggaaatcaaatcacaaaggagccatcataggaggaattttaggaggtgtggcattcctgctccttggcctattggcactcttctggaccaggcagtctaagaagccgttgaagcctcgtagaggagatattcttggagcaacagaactgcagggtccaacaagtttttactataaagatctaaaggttgcaaccaataatttcagtgagcaaagcaaacttggagaagggggatttggagatgtatttaaggcttcgctgaaaaatgggaaaactgtagctgtaaaacggttaacagttatggaaactagcagggccaaagcagattttgaaagtgaagtgaagttgattagcaatgttcatcatcggaatcttgtccggcttcttggttgcgcaagcaagggctcagaatgcctgcttgtttatgaatacatggcaaatggaagccttgataagttcctctttggcgagaaaagtgtcgccctcaattggaagcagcgatttaatatcattatcggcatggctcgtggccttgcatatcttcatgaagaattccatgtgcgcatcatacaccgtgacattaaatctagcaatgttcttcttgatgacgagtttcaaccaaagattgctgatttcggtttagcaaggctcatacctgatgatcatagtcatctcagcactaattttgcaggaacattgggttacacagctcctgagtatgccatccatgggcaactctcagagaaggttgacacatacggctttggtgtagtcactttagaaataataggtggtaggaagctcaatgatgcaaggctggagcctgatagccagtacctacttgaatgggcctggaagctttatgaagacaacaacttgattgaattggtggacagatcattagacccagaagaatacaatcacgaggaggtgaaaagaacaatggagattgcccttctgtgcactcaatcggctgtcacatcacgtccaatgatgtcggaggtagttgtgttgttgctgacaagaaatgctctagagttccagcccacgagaccgacttttatcgatgcaactcgtagagtgccaggtgaaacatcaacctccagttcatcttctgcatccaaagctactgtttcgatatcacaactttcagccaggtga</cdnaseq>

Protein Sequence

<aaseq>MAKTLDQLKSKEENKALIPVVGKSNHKGAIIGGILGGVAFLLLG LLALFWTRQSKKPLKPRRGDILGATELQGPTSFYYKDLKVATNNFSEQSKLGEGGFGD VFKASLKNGKTVAVKRLTVMETSRAKADFESEVKLISNVHHRNLVRLLGCASKGSECL LVYEYMANGSLDKFLFGEKSVALNWKQRFNIIIGMARGLAYLHEEFHVRIIHRDIKSS NVLLDDEFQPKIADFGLARLIPDDHSHLSTNFAGTLGYTAPEYAIHGQLSEKVDTYGF GVVTLEIIGGRKLNDARLEPDSQYLLEWAWKLYEDNNLIELVDRSLDPEEYNHEEVKR TMEIALLCTQSAVTSRPMMSEVVVLLLTRNALEFQPTRPTFIDATRRVPGETSTSSSS SASKATVSISQLSAR</aaseq>

Gene Sequence

<dnaseqindica>5361..5672#4819..4969#4518..4749#3831..4044#3555..3682#2453..2575#1..64#atggcaaaaactctagatcagttaaaatccaaagaagaaaacaaggctctgataccagttgtaggtatacccaaaaactaagccaactagagggggggtgaatggttgatatacccaaaaaccaaaacttttagcggaaataaaagttaacctcaaattcgacggatcgcggtctgaccaaaggtgttgtgccggtctgaccgcctggaacgagtcggtctgaccgagattgaactccggtcgaaccgccgaggttgcctgctgcgcctgtcgccgtcgccggtctgaccgccgtgtccccgcgggtctgaccgctacaatgccgccggtttgaccgttggtgcgccgccggttagaccgccgaaacccagtgaaacaaaaatcaaagaactcttaaagtgcatgacgactttgttgattctctctgtgtttaaaaagtgcacaaacaacactccttacaaaaatttcgactaaactcgataccctaactcaactatcaactcaattgctctaaaaagcgataccgggaagcctcacgctctctctctatttataacggaggtaggtagcctaaagccacgaaccaaactcatactagaagtcctaatcaccctaggaaaccctctagtacaagaaacaaactttgcataaccactcataccaaatttggactccttccaaattcgactccacatcccatacacacacaatacctctatagtatgccatatggaatcttcaccaactacgtgcattgaactctagccttagtatcccgcatgatctctgaccaccagtgacgtcgtcttatccccaagccgactcccggtccatcaccataaatactctcccggcatcaattcacttacacatggaacaaacaaataaaccatattccgagaccaagttgtccccaacttgactcattagtagcaaacaacagtattacaaacgcatagtatccatctagaagtcataacaatgaaacaatcacggatatccaaacaaacaacccgaaaccggaaccgacacagagtcggccgatcagaccgcgggctgcgccggtctgaccgtgcgatacacgccggtctgaccggcaacccatgcccagtctgaccggacccaacatacagtagtccctgtcaatcacatgtaaattccaatcatctccaaaaccacttcgcaaataaattccaaatatcaaaaccaataatctccaatgccaattgttcatcacagaataataatcaaaaacacctttgattttacattaacaagactgttgatgtatgcctccacgccacggaacttcattgtagccaggtcgcagagtctaaaacaaaccagtgaagacacaattgagatagttttctagctggttgctatctcttttttcacacaaaaacagtttgctaccttgcagcagcctgtgtcgaaccaaatccagctagaaaacaagcatacaatgaacgcatgaacaaattctgactcctaattaacaaaaagcattaatagagtaatgtaattgagacatttcctcatgacaaaaactcacccaatatatctctttccacaattaggcaagtaaggtcacacatttgttgcagtaccacggtcttgtttctattagaatttagacatgtaaaacgtcatttagtgcctcatcagaatggtgctcgtcctaggatggtttatgtatagtatagtgggatcacacttccgcttggatcaaagcaattgagtggtccccgcaaaaaaagggcaattgagtggtggagctgccaacccttcgctcggagccccatctaaaggctcctgtccgaaggcatccgcagagtgtgggacacctttgtcctagtcctagggcgtcggataaaaaggttggattaggtctctggagaagaggggttgggcttctctagatcctcctagtagagcttagaggacccattgaaaagtaagtactttttttatcatgtcacaaagaactctattcttcacatagcaacaactagaatgaaaataaaaaggaatgaaaaagcatatggaaataaatgattaatttctatccgcttgaaaggcccttctccttgcctccgccccgccttgggctccttgggggaggaacgagtccaaaggcctctggttccccctacaatttgttttgcaaagatatttcaatcaaagtgaaaacttgtatctttgaagcatgtgttgtattgatggatggatcatacatggacatgttgattgtgaggtcattttgtacatttcaggaaaatcttctacagttaattagttgtttaaatattaaagtcaatttatttacttcaggtagtagtctctttgttgaggttagtttactgtacaatttcacttcgagagcaattaaatattatgtctcttgttcaaaggtcttcagttcagatctctccatccattatctatgcagggaaatcaaatcacaaaggagccatcataggaggaattttaggaggtgtggcattcctgctccttggcctattggcactcttctggaccaggcagtctaagaagccgttgaagcctcgtagaggtaaacaactatatgttttgtgaagtatactaccttcttgcacttaaactttatgttgatgtcttcaacggaacattaagagcatggtcaaatatcaggttggcatgtcaccaaaactaatttgacatatttcatgaatttgtgaaattaaactactttagacaatggacatgctttatccatctcaatagccggaggcatacatgctttcaccaccacaatatcattgaaagcccttgattcttgatacgtttttgtggtacatgaagtcaacttgcatactccctccgtactcgtaaagaagtcgtttaggacaatgtttaagtcaaatcttgggaatataaatcataaataactcttaggttgttgagtttgaaaatgtaaaaattatatgaatatatttgtcttgaaaaatactttcataaaagcatacatatatcacttttcaataaatatttttgtagaaacaagaagtcaaagttgtgttttgaaggccgtgtcgctgtcgaaaacgacttcctttacgagtacggagggagtatttatcaatacacttgagtattttgactggctgaacacaaaatggtatgtgtaattttgtcttgaaaagtacttacataattttaattatcacaatttatgaatatgtcaataccaagaaaaaaataggagcgaaatttgctgtttggagaatttgtcgatgctgacttgtttgtgatccgaaggagcaataattttcaaataaaggacaattattgatctctggtgtatggagaagttgtgtttgtgcacagctggaatcaagcaaagctccaactacatttcttttgcatttgaacgtttaactaattcccatgtttataatgaataaaaacgtaccatatgaccaagttttgcaaaattcatttttccataggaagctaattggaacgaaaaggaactacttagcttctttgtctctaactgtatttttctttaggagatattcttggagcaacagaactgcagggtccaacaagtttttactataaagatctaaaggttgcaaccaataatttcagtgagcaaagcaaacttggagaagggggatttggagatgtatttaaggtattacaatagtcaaatattgaatcttctgtactgattctaagacaagatgcaactctaagtagaataaaaacatctgatcaccagtgttgctatttgactatacaaaatggtaaaataaatattgaaaaaagtacatttctgacaggcttcgctgaaaaatgggaaaactgtagctgtaaaacggttaacagttatggaaactagcagggccaaagcagattttgaaagtgaagtgaagttgattagcaatgttcatcatcggaatcttgtccggcttcttggttgcgcaagcaagggctcagaatgcctgcttgtttatgaatacatggcaaatggaagccttgataagttcctctttggtatgtttctcagttctttagttttcttttgaacatgcaggggatctgtgtgtcatttcattaagcaaagacctcaagtctttattgtttttattgtttaaattttctgggcacttgatggacatatggaagcttttttttttgttcatgtggcatttccatttgatatcatacttctattggtacacattctgaggggatgtttggatccctggcatgcggagcagttactcttggctaagctacgcaaccaaacgttcatgttagcttctattggctttagctatgatgggctagtttatccttgccaggcaaggcatggtgattgggggatccaaacatacttatatgtgtagtttaagagggggaatcgcattgctaatgatcaagtgtagactgaagttaattagcttaaagatgatcatgctgacctacattctcttttggcaatggcctcatttttgttgttataggcgagaaaagtgtcgccctcaattggaagcagcgatttaatatcattatcggcatggctcgtggccttgcatatcttcatgaagaattccatgtgcgcatcatacaccgtgacattaaatctagcaatgttcttcttgatgacgagtttcaaccaaagattgctgatttcggtttagcaaggctcatacctgatgatcatagtcatctcagcactaattttgcaggaacattgtaagtttgaagatgaaaatatcgttttaagggcatatgttgtgtttctaattatgtttacttaagcaggggttacacagctcctgagtatgccatccatgggcaactctcagagaaggttgacacatacggctttggtgtagtcactttagaaataataggtggtaggaagctcaatgatgcaaggctggagcctgatagccagtacctacttgaatgggtatcagtcattctaaaaacttcttttttctcttggacacataccacattttaactgcatatttctcatacaaccgtacaggtgtttgcgcttatgattatattcgtacaattcctgatatgaatgtatttgctattttttattgtacatattaaatttgataaagttattgccgagatggcatattttctaatatcaaggttccaccaaaatttgtccatgttaagatcaggaccaaacaatttgaattgttcattttcaatttgagaaagaaatgtcttcgtagatcatatgatcatcttgtaatgactattaagatcttttgtaatgcaagactgtattatggacattttgttaaatgtaaatttgatcatgccttcttgttttacaggcctggaagctttatgaagacaacaacttgattgaattggtggacagatcattagacccagaagaatacaatcacgaggaggtgaaaagaacaatggagattgcccttctgtgcactcaatcggctgtcacatcacgtccaatgatgtcggaggtagttgtgttgttgctgacaagaaatgctctagagttccagcccacgagaccgacttttatcgatgcaactcgtagagtgccaggtgaaacatcaacctccagttcatcttctgcatccaaagctactgtttcgatatcacaactttcagccaggtga</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0470200, RefSeq:Os11g0470200