Os11g0471200

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Revision as of 09:10, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0471200| Description = Conserved hypothetical protein| Version = NM_001074408.1 GI:115485464 GeneID:4350490| Length = 10671 bp| Definition...")
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Gene Name

Os11g0471200

Description

Conserved hypothetical protein

Version

NM_001074408.1 GI:115485464 GeneID:4350490

Length

10671 bp

Definition

Oryza sativa Japonica Group Os11g0471200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:18032172..18042842

Sequence Coding Region

18032297..18032447,18032970..18033040,18034381..18034497,18036738..18036978,18042793..18042842

Expression

GEO Profiles:Os11g0471200

Genome Context

<gbrowseImage1> name=NC_008404:18032172..18042842 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:18032172..18042842 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>actcgcaccatagaaaccagcgtgagaacagggctgcacagatcaaggaggacaatattggaagacgatagcgaccacaagcccctcttcgagaaggcactcgtcgggcaaatcaacattgaggatacgagtggaaaagctaaggatgtgatcagcgaggaggggagcagcgaggagatgaaggatagcgacaatgatgttggcatggtcattgggggatatgcgcaagatccatacgatgatagaggcctagaagaactcatgcaagaccaagatgccttggaaaaatcggtcttcctcatcggcatcaaagttgagatcaaaaggaaaggcattatggttgtgacctccatttacttgcagaacttgatccatggcatcggcatcgtctacaataacaaataccatattattctatattggtccatggttccatatatcgtgctgaagttcagagctctttgcgcacaacattggagatgcatacaagttgatatcaaaaggaagcacatggatggcacctccgtggagatcacctccaagctggtcatcctcttgatcagccactgctgcttcttcagccactgcttcattgagattaggtacagcctgttcatctccctcatctaa</cdnaseq>

Protein Sequence

<aaseq>TRTIETSVRTGLHRSRRTILEDDSDHKPLFEKALVGQINIEDTS GKAKDVISEEGSSEEMKDSDNDVGMVIGGYAQDPYDDRGLEELMQDQDALEKSVFLIG IKVEIKRKGIMVVTSIYLQNLIHGIGIVYNNKYHIILYWSMVPYIVLKFRALCAQHWR CIQVDIKRKHMDGTSVEITSKLVILLISHCCFFSHCFIEIRYSLFISLI</aaseq>

Gene Sequence

<dnaseqindica>10396..10546#9803..9873#8346..8462#5865..6105#1..50#actcgcaccatagaaaccagcgtgagaacagggctgcacagatcaaggaggtaagtgtattgttacattttaatagtgttcagacctagcaagtagctgtaataagttagctagatcagcaaaatttcttatggtactaataagctgctacatttaccgtattttttttatagaaatagggtgcttttatgaacttgtgtactaaatgcagcaggagatagatatattagtgtgaaaggttagtacttctagtgggtagtatagagactaggagttactagcaagcagctgtactacatgctgcatgcatgcagtactgcgcccatgcagcactgctagactagatgcatgcaagcatctaccccctccgtcccagaatgaggcaatttctggcgggaaggatttgtcccacaaagaagcgattccagcccaaaaaaccagatattttatctatcgcatctatctgtgggccatactactgagggcagcgacctctctctcctctcacaccacagaaacattatctcttccccttcccggaattgccacctctctctcttgcgtactcctctcgtctctctctcattcccagatctttcccctccgcacctccagatgccaaatcgaagccgcaagcttccctccctcccgatcctccccgcacacccctccccgctccacgccgcttcccctcgctcccgcttctcccttcgatgttctgcgttcaccaggatgcggccgctcggatgtggtggcagacagttgcgagggtttagatccgataaaggaggcggttccggtggaaagatttggctcggtagcagcattcatggaagcggcataaaaaattatggttttgattaaagatacgcgagccaaggcagaggaggtgtgccgtcttgcggttcttattcaagaggctacggcaggaggcggctcgaatgtggcagcggtatcggagctttgcaaggtggtggcgacggcgggggatggaagcggttcgggtgtggcaaaggcattagaggtatgcaaggcggtggatgtgatgcacaaggaggtggcggcgcccgcggatctgatgcaggtagggacaacagcggagaaggtggcttaccgaccaccttttctaattccggcgccaagagctgtggacattggcggcgatgaggtagaaaatccatcctgctaccaaaggtatctcccgcttcatctccttgccaccaatacgttcttctcatgcaatgaaaactgctttgatgtcgcgcctagggattcgacaacccaaatcaccggccatctgtgcattaacctctgtccaggcatcaaccagagtacacagatgacaatttatacagttccacgtcttacaaaaataacaaaataaaactcatatgcagcggaaaaactaaagaactagacttaatattcacagcaatgcgaagcttcctccataactccccaggcaaactcttgacggctagcacaagcctaatcttcatagaactcaccatctgaaccaacttctgcttcggggggattggaaaaaagaagcaagactgagtacaaccaccgtacttaacaagtaatacctaggggaaggtatgatgcaagggtaaacaaaggattggctcatatgatattttgcagtaaaagcagcatttgtaaatcatatgttgaaagtagtaaaacagtagataattaagtagtattaatatcatcattgtccaatgctaaaccacgttgcgacaggcccaaaccaaaaccacatgaactacaccagttcattaaggcaaattattaaggtgagactaatcatggtgagctggttgaccgcccaataaccgcggacacggctattcgaatagttttactctgataagaggtgtacaacttcacccacaagacatgattccacacatgaaaacatgccccaaagtaccgccacgatactgcaatgggggaaatcgtgaaaaaaccctccatataaccacccctaaccagcacacgcacctctggtttctcccccatgccaaaatccaggagcaggcagcccccgctcgtgcctaggtaaatcggaagcagcatagaccgcctcccggtccatccatactccatcacgcttacccttgccaatggtgcgctagctagaaaagattatacttaagattcagcctggagcccatctggcttgtggttagtacgagtatatcttctagggattctcgagaaccggtccttaattatcttgggcacgaccaccaaaagaaaccatgcatgtgcccacgacccaccaagtaaagcatattttaattaattaaccatatgccaagaaggcatagcaacagcaaattaaggactatattatagtgaatcccaatgtgagatagttgatctaagcatggctaagcaatcctagaccaatcatcttgtcaaattattaacccaagctatcaatgactcagggtaacaaaggctaagtatgggtaaaaccatcccacatgacattacaaaagtaatgcaattttgagagaaaagcatgggtttttgcaaataggctcaatataatcaatgatatatgtatgaattgccttgctcttcagctgacgggacctcggcgaccacttcaaaataaactggagcgtcggaactgccggaatctaaacgacaaaaaaggaacacaataaatacaagctaaaaagatactgaaacagcaaaagaaaccaattttaatggattcttgacattttaacgaatttattgcaatttgaatgggttaaaacggagctcagattatttagttatgaattttacaatgtgctctatgtcttttactactccctccatctacttttaatagtcatatttccaaatctgaaaaatttatttttgataaacatatttcaatccaacaacctatcatcttaatgactttcttggatttaatgcgtgactctccattcttccacacaagattggctacatgggcatcgagaaatgtaaatattaatgaatcgcttgtttacgaggaatgactagtagcatgtttaaatggatgataagtagaattacttatccttggtctgtgtgccaagatgaaatatgactatcaaaagtagatggagggagtattaacataaagaccttagtcaattgacagggatttaagcccaaaagaacatagaatcaaaggatagattgactggcaagcgagcctcacgagataccgactcaacgagtcaatttaacatgacacgggatcacccaaatgatcaaccgaaaccagcgaatggaaccggtggctctgaaccctaattgactcgggacggacgaacgaacgaaccacaggagaactcctcgttcgtacgaacgagcgaacgactcaacaacggctgcggctaaacctgcgggatagacacgattcacggtaaagcctcggtttggcaaacgattggcccataggaacctagggttgcacctacggctagacaactcaactaccgagcaatgggctaaagcggtggctaggttttagcggcacacggctgcgacacggtagtgctagggtggctcggctcggcggcacgcggcggcggcggtggctttgctaggcgcgcggcagcggcggctcggcaaggcgcggtagcggcgacagcggcggcacgacgactcggctctagggctagggctacggcagaaactctagggacaagaaaacttagtcctaaaaggacggagaacctcaccggaaaagaacggcgagcggagggaggacgacggcggcggcggctgttctggcggtgagctcgggatagacgacgatgatgctagaaaagattgaacggaaggaattagatagatgaattgatgaatgctgcaccaaatacatccaaaataaaggagaacggagtaccgacgacgcaatggcggctaacgacggcggtggcagcaagcggtggcggcggctcgcggttaggcagtgggcagcggcggcttgcagctaggactcgggaaaacacgaaataaaaactagggaggaagacttatataggggaggactggattaggaaaggaggtgtcctagagggagtaggactaggagggaggggagggagtccgactcaaagggggagaggggaggcgcgcgcgtgggagagggggagggaaaaaggaaaaaggaggggactaggactttccgaacaaggaaaaacaaggcggtgccgttctaggaaaggaaaggaaacggtcccgcaaactgacacggatacggttcgtcatgcaaaatgaaccgctgactaagaggaggagtgaattgggcacaattcacgaccaaaggaaaaagaagaagattaacttgacacttttaacttagcaacattgcctccggtgatctgatatttactctttaagtcctgttaatgatttttagagcaaagagaattcgaaaaaaaattctccctgataattctgattattaaatgcattgttaactggggttttctcctggttaaccaaagcaaattcttgaagctatttattagtgatttgaaacctaagggaagggagaactccgggtgtgacatttgaatggcattgaaaactgctttcaatggaggatgtagcacagatgcacggggtgtggttgcatacctaattttttgtatgaaaataactattaggtatagcaagtactataacattagcgtgccggttggcatgctttctttatagtagttatttcaactttaatgttccatcaaatattgtattatcttgcatataattacgagcatatataatctcctgcaatgttaatatgggattaattatatatgttcaaaccaatctatgtttccggtggatgattaattatatatgttgagtttctaccaatttcttgagataattgaatattagaaagtattaagaaagtagaaagtaggtggatttaaatattagaaaggtctctgaaaaaatattagaagattgataagtttcttttttctaaaaaagggactgattataggcaaagaattcatgggaagattgtaacttacaaagcttaccctcgataatccataatactctctatgtccacaaatattagttaagttgtggcctatgggcggtctttaggttcactccatccctcatttttgtaggtcactacaccatgttcccctctccttttcagttgagctgaaactaatttacaggagtatactagtgtcacacttgtcacacttgttttgttccctcgtgcatggcatgacatgattaatttgggacccctgctggctgcagctaactagctagcggctgttgcttgcttgacctgtttattttaaaactactagtaacactaagagtagaataatcagtaaggagttctgaaaccttgccctgaacagcttcagcttgctccaacagtccaactgcacccacgaatagttaggagtagcattttcatatattgccattcatagccaattaaattaactagataatcttgctgtttttgtatgagaaatagcatggatgcttaacatttattgagcgcaactcttttttgataagtcactggttttgatcccttaactagggcacacagatatatatatacactgatgtactctgatttttagatatcattgccatgatcagtccctttggtctttacttcattttagacattgattgttcacatgttgcatcattatataatggaatcaaaatacattttagtttgattcggtgatagattcacctttacatcacaaatcgaaatactttatttatatgttggaggttcaagtgtctaacaactgatcccatcttgtattggtattgtgttttatcctttccaggacaatattggaagacgatagcgaccacaagcccctcttcgagaaggcactcgtcgggcaaatcaacattgaggatacgagtggaaaagctaaggatgtgatcagcgaggaggggagcagcgaggagatgaaggatagcgacaatgatgttggcatggtcattgggggatatgcgcaagatccatacgatgatagaggcctagaagaactcatgcaagaccaagatgccttggaaaaatcggtaaagaattttctggaatgttttaagagtacaaaatttagatgaatgcttaaaattatgtgttgcttttgtgctggtttggtggttatgaatgatggcctaacatagtatcttgaagtgcttaaattacttgcgtaacactgatcttaacttatcacatatacaacctgacatttaaccaaaagctgaaaccatgatagtgctttcccatattgcatgatttattgcacttggttggctaatgttgttcttaccttatcatatagctcaaaaccacaactaagtgtattggggagaatgtctagacgctctagcctctctttacccatatgaggaatcttgtatccatttccaccatcagctttcgtaacctctaacaagcaagactgcaatgttagaaacaccctatttagcttgtcatcatagacctgaaattactgctcaacattatctattaggtcatccatattcctggatatccttctatatgttaatgattgtagagacgcaaaaaacccaagatctagtgcattcatatatggggaattaggaggttgatgcatgagttgaatgtcaaaccctgtttgggaaactgcataggcaaattgagtatcatccactgggacatgagagggagcattatcctgctgaatccatatagtgttgtgtgcttcttctcgaggccaacttgctataatagctggtaggactttagcaatcagaaatgaccttacggtatcttgatcaaccttgattgtcttggtgactagagtcccccttcatctaatatgacttgtcctttgagctggttcctaagtagtacaataatcaagttagattaacaattacttttcagatcaaataattaattttcagatcaaatcactaagtaaaaatgcatatatgaagaggttatagtacctttctggtgaaaggccacaagcctatcttgccatcaaaagtgcagataccttcttcattgtatctagacctagcaactgctgccgagaacatcactttatcaatagaatttttgttttggacaggtctgtatggatcatcctcccaattgaccatgtaaatggttcttgtccttttagttgtattgaaccatttttcatctatgtccacaatgtttcgcatatcaatgaacttgggttcatttggcaaagtatgccaatctaacatggaaagacaccaccgcagccttgattgtttattctcttccttcaacaatggctttagtgtgtttgagtgacgtcttagcagcccttctatcaacatcctgtgcagcgtgttctttggtatacctgaggctgatgcaaatgaccgtaaagtgctccttagttgcaagggaacattagcaacatctgtcaggttgatttcattctttttgcgaccacaattcttttttttcctagaccttacatcgattggtattcccttggcacgacattgcttcactcttcaccaaattgcttgcactctagcccttttcacattaaacattgctgcaacttcagttgtagcattttttcttagggttccattgttagtttttccagccaatgctgcatatatttgttgcctttgtattttggtcagatttttgttttgttgttcatcttcctgatctgaatcatccaactcctcttgttcgaaaacaacttccacatcacccgcatacacgccatactcttgcatgtctacaacaacaattatacggttagtcatatgtaccaattcagaattttaatattttattgtcatggatcaacatgcttgcaacattatggcataactttttaggttcaccacgtggttttatttgtaatatgatttaaccatacatattagatctaagtgagacagagagacattaacacaatttagtttatgtgctttctttcagactgctgtggtagtgaaccaattgacatgacaattgtatgtaaatacaagatatcaatgtatttattggtcaatctcattattctgtgtgacatactatgtgctgaaatgtctaatttacaatccttaattgttattgcaactaatacaaccaatgacacggctggactattgtaggtagttggcatgatataatattactactaattaaaaacatggttttagataaataatattattcttcaatgatcctttgggtaaaaccacattttatcattttttttgtaagtctgatattcatgaaagggtttacctggatgcatttgtaggtcttcctcatcggcatcaaagttgagatcaaaaggaaaggcattatggttgtgacctccatttacttgcagaacttgatccatggcatcggcatcgtctacaataacaaataccatgtgagtaccatgttgttggtatttcttaacgttatagatagaatccgcaagcgcacagaagatacagatgtaacacttcacctgggagtattccagagtatcgatttccatagggaacgtgtgagttcaactcatcgtcaggttcatccaaggacacaaagctaatgtgggcagagggcatagaggatttcctaataagaaacagtgtctagggaaagcttaattttaatcctaacgcaatacttcaggcactggcaacccgctgtttccagatgttgctctattacgtacctggacagggaggacttaagttctcttgagggctgtcaccacctctacacccacctcaaacgtactgtgggatacgcagcaaccactggaaattaattacctagacaccgcgtctacgcaattaataactactctagtgccgatcaaacactaaagcaatcactataaattaataaactatagtgaacaatgatcctgtacgctaattaggaactaaccaaaaagtaattctcactaagtaaatcttaattactcagaatgatatttctattaaagcaaagtaattaacaagatacagaattaagagaagattaccgacaactccgtaattcctccgatttcttctaccttactctctccctaatctaatatacaataaagtatactagagcctcttataattcagctcatgctttggtgtgtgtgagaatgagggaggagaggggtatttatagtgtggaggtgacttgagagagtggagatcctccaagcatccaaagagcatcttctctcttgtgttgtcaagtgtccatgttatgacggtttctaccggtgaaaatggccataaccgtcattggtaagcggattgctaccaaacgcaactttggcctgggccaacggccttcgtgagggttcatccgtactcagggttcggccgaacctgggacggctccgttcgcttcggttttcggcctggacactcattttaggcccctaaatccattggtatgaatgtttggtccatttggaggtgtttaattgggtttctgggtccaaaactccataagttcggatacgagtttgattctcctccaccttcatgtatatttcctctcaactttggtagtttgtcacctgcataggaatatacagcaacactcatggaaattgttagaaataaactctaccactatattggatgttttatatttatggtcttatgtaagtattgacggcattaattcagtacttaacagccgttaacacatgtccaaaaacaataatttttgcatgcagattattctatattgatccatggttccatgcagattattctatattggtccatggttccatatatcgtgctgaagttcagagctctttgcgcacaacattggaggtacaatctaactttcttttatagtactagctgaaattatgacattagaaaggaagatacaaaagttgtttgttttttattccagttcatgattttacaaatagacgaaaacagtggtcttgctttctgatttctcatgtttattcctactttatattaagatgatgttgcttgagctacaaacaatttagctcaataccagtactgtaaaggaaattatccatgtagaatctagcatatcatgattagttgtaggtagatacatgtataaatatcaaagacagaattgagttggtaaatatcaaagaaaaaaaatcaagtcctaattgttttctcaatcttatgaaagatcaattttgttccaagaagatagcaattgcatcaatgcacatgttatagatcatttttacagagaaatggcaaagattttagagtgatttatgcaagccatatctacaaagatcaattgttttctattcatgtttacaaggttacctggatgtatttctccttgatggtcagatgcatacaagttgatatcaaaaggaagcacatggatggcacctccgtggagatcacctccaagctggtcatcctcttgatcagccactgctgcttcttcagccactgcttcattgagattaggtacagcctgttcatctccctcatctaatggtatatctatacttctaaagctggctggatctccagccagctgattggaccacgtgtccttcctcatcttgcaaataaattccgattttatgtaataagaaaatcaggatattttccggtgct</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0471200, RefSeq:Os11g0471200