Os11g0483600

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Revision as of 09:10, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0483600| Description = DNA-binding SAP domain containing protein| Version = NM_001074438.1 GI:115485524 GeneID:4350522| Length = 5411 bp| ...")
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Gene Name

Os11g0483600

Description

DNA-binding SAP domain containing protein

Version

NM_001074438.1 GI:115485524 GeneID:4350522

Length

5411 bp

Definition

Oryza sativa Japonica Group Os11g0483600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:18837213..18842623

Sequence Coding Region

18837246..18837392,18837537..18837582,18838480..18838621,18840619..18840698,18841406..18841507
,18842251..18842291

Expression

GEO Profiles:Os11g0483600

Genome Context

<gbrowseImage1> name=NC_008404:18837213..18842623 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:18837213..18842623 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggccgagggttccagccgcggcggcggcggcggccggaaagcctcctggctggggatgtcatcggagggcggcgcggccaagttcctgtctggcttgccgtcgcgcggcaatttctcctcgatctccgcctcttccactctcggacggctcagggtttacgtctgcgagcatgacacggatcctccagagggacaagttatagagaccgatacaacaaatattttgatcagacatctccagctaaagaaaaaggagatggatgccaaagaagccaaagaggccagagatgcaggttctaggaaccaaggggaaaccgtcaaatggaaaagagttgctcccagaagtttggatggccaaagttcatctaaaaggcccaatttgggtagctcctctgggctgtcttctgctgaagaagcggcacctggattttcaggtcacacactacagacattcacagttgagaggttgcgtgcacttctgcgacagaggggcctcatgaccaaagggaaaaaggatgaactcatcgctcgcttaagagaatcacaggactga</cdnaseq>

Protein Sequence

<aaseq>MAAEGSSRGGGGGRKASWLGMSSEGGAAKFLSGLPSRGNFSSIS ASSTLGRLRVYVCEHDTDPPEGQVIETDTTNILIRHLQLKKKEMDAKEAKEARDAGSR NQGETVKWKRVAPRSLDGQSSSKRPNLGSSSGLSSAEEAAPGFSGHTLQTFTVERLRA LLRQRGLMTKGKKDELIARLRESQD</aaseq>

Gene Sequence

<dnaseqindica>34..180#325..370#1268..1409#3407..3486#4194..4295#5039..5079#gcgagaaaggggaaagaaaggaggtgcctttccatggcggccgagggttccagccgcggcggcggcggcggccggaaagcctcctggctggggatgtcatcggagggcggcgcggccaagttcctgtctggcttgccgtcgcgcggcaatttctcctcgatctccgcctcttccactctcgtacgcacgcccaatccctgactaaaacccccacaaatgatgtactttttttttaatttcccttttggcgttaagattcttgttgaattctcatggagggtgagaggattctgagatgaatttctttggctgtgatctgcgcagggacggctcagggtttacgtctgcgagcatgacacggatcctccaggtcagtgggagattcattcttgtagagattttgtagtagtatgttgtatttctgttaactcagaatgctctattttgctagcttcttaggttaatgttttaggtttttcatgtagtggttgtggtgttttgtgtgtggaggcttcgattgatggaagctgtctttaggattccacatgtccactagtatctgtggaattataagttttttttcttcttcttcttctagggtttatgtgtattttgcttaaagtataaagtaagaccgatgagtaaattctagtgtgctaaaaagcatgtacaagtgttgttttcactgtttaggatttgtagcgaatctagtgtcgctgtttatttaaaatgtctgcactgagaatctgtgctgagttgctcttagattatgtgcctcaatgcacatgaattttagtttttcatcgcgattcgttgcactcaatgcagccagtatgacggaactttggttcttggagttaatgcagtttcttcctttcaattttcattcattcttttaggttaagttttggtaatttagttgtaaatctatgatgtttctagatgaaactacagtagatggttactgcagaaatttcttccatagaaaaggttcttcccaagggactgttgtttctgttatacgctgtaccaatgcacaatttaggctttaatgttagaaatcatggaaactcgcagctctcctattttactgtgttctagtcaaaacaaattgaaatggagctctgcattggcagtaggtcttggggataggagttggtggagaatatcaccttgatgggttgttcacctgcttcatatgttttgtggctataatttgctggcagattcattaaaattttaactgtttaatctcttttctgtttagagggacaagttatagagaccgatacaacaaatattttgatcagacatctccagctaaagaaaaaggagatggatgccaaagaagccaaagaggccagagatgcaggttctaggaaccaaggggaaaccgtcaaatggaaaaggtaaatctgccaaattgacagtatgtgttttacagtgccttattggagcatccttttattactaattaccatgtcattccatgctttatatggactatggtactcttgttacatatgagatggctcatcccttgcagcacctttctattttattttgttctggtctttttctatgggtattatgtgattcattaatttttaggccatgtatttaggggtcttacaacacccatttgatcttgaagcataatgtaacatccttgccctaattcctgggtaagtcccatggagtttcagtaaattaatgagcagttgctgttggaattttctgtgcttaagaaagctctatggattttcagcataccatgctttattagtttagttggtttgcatacctacatcagttttcaactaagtctcatatttgtgaatgactttaccattggtggagattgaagagcagctgccataattattgaatggccaaatttgacctgtctagcttgaccctacttcaatgtcatgtgcttattggggcaaagcaggctctactattctacatttctagtcatatatgaaaaaaaaagtttatgagaccgagccttttcccctgacaatttcacttgttttttacattatcggcattgactggatttgaattccataaatctgattagttcacaatgatttgaatccactgccaaaagtaatatatggatttatgaacatggtatttttcttaccgggttacatatgattggtgagcatggcactaaattaggttgttcagcctttatggtgtaaccatacaatttggctccattctgggtactaataattctttatggaatgttttaggcctagcaccctttaaaaataccaagtctaaactcaaattgtttaaaaggaaaagatgagataagttcctattaacagtaagtagaagcacctgccactttttttgctttttccttttgatcctttttgcagagaatttctcattttgttattataggatgaattgtaacttggttttattcatttctgatgtatatacaaatatgtagttttatttggaatctgtcatgtcaacttggtgcacaaacaatactagattacaagtttacaaataaaggaagagttacagctggtgaattgttgctcttcactaacaagttatatgttgcgttccacgacttagaaagctggctagattaggttaatccatatagtgtttaatttagttgaattataacattcttttccacagcctcttgaattatcctgaaaaaccacacaaagagcaaattatccaaactcttctagtatatctattgatctttttttttctcgaaaaattaggaggaataggcttcatttcattaagaagaaaaggaaatttacacaggagagagacggaaaggatcctccacccaaacacgtcacacaaaagacaccaccaaaaccccaactaagcacctggggcagcgacctcacaaccccaactattttgtcattttgaataaattagtatcttgtacatttgtgagaagaacaacagatagtttttatttcttcagactctttacaggattaaatcctttagtagaaggtacccactgtagtggcctacagaacaaccaagtacaaccctaaccatagaggtaatctcccaccatgcagcattaaatttgtgggaacctaataaaacatatgaatcttccatttatccattacagatcatgttactgtttgtatcatgctatgaagccacatacgctctaagcgatttattggagtgatttctttcatacttctatgctgatgctgacgaatagcttggccattcagtgatccaggattaatacaagttctttgagtcatacctacttgtcctcatgaaactgtttatccttcttggttgcttattacttgggatgatatgactatataaattaggtctggaagtaattatttttccttttttgtttgactagagttgctcccagaagtttggatggccaaagttcatctaaaaggcccaatttgggtagctcctctgggctgtcttctgctggtaagttgtctaagtcttagtcttccagtttgggcatttgtgaatgtctgatacttgataatgctaagatacgaatagagagaataatgtttcatttattagcattttgttgaggaaaaagagagtaaaggatatcaattgtccagatttacctgaagccaaccctttttcaagcttctacccaaaaagaaaaaagaaagaaagtggccagagttaccaccttccattgaactttttgccacgactgtccacttgaatttgtgaagtgcccaaccaggaggaatgctttgccttgttctaggtttacaactttacatgttaagccactaactgtctttctattttaaggccccattcgtttgcttagtttggaggagcttttcagccgctgtgaaatgagaaagcccattagcacatgattaattaagtattaactattataaacttgaaaaatggatttatttgattttttttaaaaaaaacttttctataaaaagtttttgcaaaaacgcgccatttaatagtttgaaaagtgtgctgatggaaaacaaggaagttgtagtttggagttgaagaaaagaactaggcctgaatttaagatcagtaatatgctgatgcatgctttagcattttaaaagaagacaaaaacatgctcatgtacagtctcacaattcctctaataactttaataaactttcatattgcagaagaagcggcacctggattttcaggtcacacactacagacattcacagttgagaggttgcgtgcacttctgcgacagaggggcctcatgaccaaagggaaaaaggcaagcaaaaattgtcgttccaagttctcttgttctaaatttaagtggtttcatgcttttaattctgtcactagtatatgtatttgaatttttgcttgtagaatttattttagtagaatgtcagctaagatgactggatatccaccatttttgaacgtttggatgattctgtagtgtctgacacctgatattttcctaggaagcttagtcagttacagaatttgtccattagtattccaaatgttccctcaggacttattcgttgcatggcatatggtaggattttgtttctgtagaagcttcataattttttagtgaaagttggctttacaaaataaaatgaatgggatgataagagcctgagctttgtcatgtaactgcagtattgtgcctaatagattattttaagaacaaaatatagaagttcccaaaacaagcttcttctagagatgcttgtgttgtcagtaggctgttgcttttttctttcagtggcagcacattatggtttttgttatatttacactatttgattttgacgccgcggatgtggcattagtaaatgaactttcttgttaataaagcattgacagtcttcattcttgcacattagaaaataacacaggttcccaaataagaattattttcacataattgatcatgcctacattgatctacctaggccataatcttttgtgcgagaagtgtattcaattttttgatgtatgatgtccttcctactgcaggatgaactcatcgctcgcttaagagaatcacaggactgatctagagaaagctcgtgccgtactctctttgtaggttgatgcaatgtgtttcctgatttgctatgtcaagctttgctgggagcagaatgagaaccaggcttcatctgttggctggatgttaaggctctaggagatgtagtcacttaggttgggccttgagaacttgtgcctaattgcattagcttgtcagaaatttgggcttgggttccctgtttgttagggcttatccagtgctttacttggtacatgtagaaggctaatctggcagtgtttgtaaccttttgtctcatactggaggagttaccatgctaatttacaagcatagttaaaag</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0483600, RefSeq:Os11g0483600